LOC100911510 (zinc finger protein 157-like) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: LOC100911510 (zinc finger protein 157-like) Rattus norvegicus
Analyze
No known orthologs.
Symbol: LOC100911510
Name: zinc finger protein 157-like
RGD ID: 6492272
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC103694468; uncharacterized LOC103694468; zinc finger protein 157
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X3,923,937 - 3,944,879 (-)NCBIGRCr8
mRatBN7.2X1,380,909 - 1,391,164 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X1,589,966 - 1,604,696 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X2,387,845 - 2,400,204 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
CeleraX1,942,857 - 1,957,580 (-)NCBICelera
Cytogenetic MapXq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in LOC100911510
17 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_063280427   ⟹   XP_063136497
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X3,923,937 - 3,944,879 (-)NCBI
Protein Sequences
Protein RefSeqs XP_063136497 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_063136497   ⟸   XM_063280427

Promoters
RGD ID:13701702
Promoter ID:EPDNEW_R12217
Type:single initiation site
Name:AC120727_1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0X1,600,790 - 1,600,850EPDNEW

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-3193 BioCyc
NCBI Gene LOC100911510 ENTREZGENE
PhenoGen LOC100911510 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 LOC100911510  zinc finger protein 157-like  LOC103694468  uncharacterized LOC103694468  Data merged from RGD:9461231 737654 PROVISIONAL
2014-08-25 LOC103694468  uncharacterized LOC103694468      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-07-05 LOC100911510  zinc finger protein 157-like      Symbol and Name status set to provisional 70820 PROVISIONAL