MTND1P2 (MT-ND1 pseudogene 2) - Rat Genome Database

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Gene: MTND1P2 (MT-ND1 pseudogene 2) Homo sapiens
Analyze
Symbol: MTND1P2
Name: MT-ND1 pseudogene 2
RGD ID: 6482160
HGNC Page HGNC:42051
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 2
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38764,111,755 - 64,112,572 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl764,111,752 - 64,112,572 (-)EnsemblGRCh38hg38GRCh38
GRCh37763,572,133 - 63,572,950 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map7q11.21NCBI
HuRef759,953,007 - 59,953,824 (-)NCBIHuRef
CHM1_1763,667,102 - 63,667,919 (-)NCBICHM1_1
T2T-CHM13v2.0765,319,668 - 65,320,485 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2762,909,727 - 62,910,544 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:102
Interacting mature miRNAs:103
Transcripts:ENST00000430604
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 2 1 2 5 2 1 40 1
Below cutoff 224 199 150 24 102 9 312 193 428 31 415 133 16 108 202

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000430604
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl764,111,752 - 64,112,572 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MTND1P2 COSMIC
Ensembl Genes ENSG00000235646 Ensembl, ENTREZGENE
GTEx ENSG00000235646 GTEx
HGNC ID HGNC:42051 ENTREZGENE
Human Proteome Map MTND1P2 Human Proteome Map
NCBI Gene MTND1P2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-06-05 MTND1P2  MT-ND1 pseudogene 2    mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 2  Symbol and/or name change 5135510 APPROVED
2015-11-24 MTND1P2  mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 2    MT-ND1 pseudogene 2  Symbol and/or name change 5135510 APPROVED