MTND2P21 (MT-ND2 pseudogene 21) - Rat Genome Database

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Gene: MTND2P21 (MT-ND2 pseudogene 21) Homo sapiens
Analyze
Symbol: MTND2P21
Name: MT-ND2 pseudogene 21
RGD ID: 6482134
HGNC Page HGNC:42122
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 21
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382117,025,074 - 117,026,112 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2117,025,077 - 117,026,118 (+)EnsemblGRCh38hg38GRCh38
GRCh372117,782,650 - 117,783,688 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map2q14.1NCBI
HuRef2110,110,269 - 110,111,307 (+)NCBIHuRef
CHM1_12117,786,458 - 117,787,496 (+)NCBICHM1_1
T2T-CHM13v2.02117,456,137 - 117,457,175 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:93
Count of miRNA genes:92
Interacting mature miRNAs:93
Transcripts:ENST00000436242
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1
Low 1 1 2 1
Below cutoff 53 47 41 15 17 11 94 53 154 33 58 39 4 20 45

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000436242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2117,025,077 - 117,026,118 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MTND2P21 COSMIC
Ensembl Genes ENSG00000230950 Ensembl, ENTREZGENE
GTEx ENSG00000230950 GTEx
HGNC ID HGNC:42122 ENTREZGENE
Human Proteome Map MTND2P21 Human Proteome Map
NCBI Gene MTND2P21 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-06-05 MTND2P21  MT-ND2 pseudogene 21    mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 21  Symbol and/or name change 5135510 APPROVED
2015-11-24 MTND2P21  mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 21    MT-ND2 pseudogene 21  Symbol and/or name change 5135510 APPROVED