KRTAP10-13P (keratin associated protein 10-13, pseudogene) - Rat Genome Database

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Gene: KRTAP10-13P (keratin associated protein 10-13, pseudogene) Homo sapiens
Analyze
Symbol: KRTAP10-13P
Name: keratin associated protein 10-13, pseudogene
RGD ID: 6481180
HGNC Page HGNC:34213
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382144,702,034 - 44,702,801 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2144,702,221 - 44,702,791 (+)EnsemblGRCh38hg38GRCh38
GRCh372146,121,949 - 46,122,716 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map21q22.3NCBI
HuRef2131,495,970 - 31,496,761 (+)NCBIHuRef
CHM1_12145,682,782 - 45,683,573 (+)NCBICHM1_1
T2T-CHM13v2.02143,062,475 - 43,063,242 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:279
Count of miRNA genes:260
Interacting mature miRNAs:277
Transcripts:ENST00000412914
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 8 2
Low 2 12 108 1 9 7 1 39
Below cutoff 88 106 73 8 92 4 287 59 153 7 120 65 4 31 140

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000412914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2144,702,221 - 44,702,791 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC KRTAP10-13P COSMIC
Ensembl Genes ENSG00000236382 Ensembl
GTEx ENSG00000236382 GTEx
HGNC ID HGNC:34213 ENTREZGENE
Human Proteome Map KRTAP10-13P Human Proteome Map
NCBI Gene KRTAP10-13P ENTREZGENE