Gm18820 (predicted gene, 18820) - Rat Genome Database

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Gene: Gm18820 (predicted gene, 18820) Mus musculus
Analyze
Symbol: Gm18820
Name: predicted gene, 18820
RGD ID: 5142731
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Akr1d1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39931,555,066 - 31,555,953 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl931,555,066 - 31,555,981 (+)EnsemblGRCm39 Ensembl
GRCm38931,643,770 - 31,644,657 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl931,643,770 - 31,644,685 (+)EnsemblGRCm38mm10GRCm38
MGSCv37931,451,355 - 31,452,242 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera928,904,713 - 28,905,600 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map917.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm18820
48 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12790993Adq1_maortic diameter QTL 1 (mouse)91574962749749627Mouse
11354951Pdcc3_mplasmacytoid dentritic cell compartment 3 (mouse)91574962749749627Mouse
1357465Vtbt6_mvertebral trabecular bone trait 6 (mouse)Not determined91697884050978943Mouse
10043847Hdlq89_mHDL QTL 89 (mouse)Not determined92929292963293072Mouse
4141447Cfmq2_mcystic fibrosis modifier QTL 2 (mouse)Not determined91541175149411890Mouse
11532696Sluc39c_msusceptibility to lung cancer 39c (mouse)92558748559587581Mouse
10043867Mtbcq9_mmultiple trait body composition QTL 9 (mouse)Not determined92679642160796552Mouse
1301421Lgth4_mbody length 4 (mouse)Not determined91541175149411890Mouse
13504834Hdlq109_mHDL QTL 109 (mouse)91670964150709641Mouse
1301365Ap5q_malcohol preference 5 QTL (mouse)Not determined93005316464053277Mouse
12880415V125Dq7_mvitamin D active form serum level QTL 7 (mouse)91601129650011296Mouse
13208563Bmiq8_mbody mass index QTL 8 (mouse)92491129668907282Mouse
1357746Vtbt7_mvertebral trabecular bone trait 7 (mouse)Not determined93073991564740021Mouse
4141591Cq4_mcholesterol QTL 4 (mouse)Not determined91541175149411890Mouse
11532712Sluc39d_msusceptibility to lung cancer 39d (mouse)92558748559587581Mouse
12790997Adq2_maortic diameter QTL 2 (mouse)91574962749749627Mouse
10043987Stheal13_msoft tissue heal 13 (mouse)Not determined92679642160796552Mouse
1558949Igan3_mIgA nephropathy 3 (mouse)Not determined93041469440565914Mouse
13504833Bglu19_mblood glucose level 19 (mouse)9991076843910768Mouse
1301045Sluc10_msusceptibility to lung cancer 10 (mouse)Not determined92030619754306370Mouse
4142352Lmr17_mleishmaniasis resistance 17 (mouse)Not determined92030619754306370Mouse
1301883Skull12_mskull morphology 12 (mouse)Not determined92030619754306370Mouse
1301000Obq5_mobesity QTL 5 (mouse)Not determined92850333341799326Mouse
1300849Sles4_msystemic lupus erythmatosus suppressor 4 (mouse)Not determined9910756237306370Mouse
1300932Hdlq17_mHDL QTL 17 (mouse)Not determined92679642160796552Mouse
12880416V125Dq8_mvitamin D active form serum level QTL 8 (mouse)91601129650011296Mouse
11532695Sluc39b_msusceptibility to lung cancer 39b (mouse)92558748559587581Mouse
4142455Elnv_mepilepsy naive (mouse)Not determined93127155837306370Mouse
12904939Edlmmq8_mextensor digitorum longus muscle mass QTL 8 (mouse)92085274054852740Mouse
10043878Adip20_madiposity 20 (mouse)Not determined92725119461251323Mouse
1357637Si5lq2_mserum IGFBP-5 level QTL 2 (mouse)Not determined91541175149411890Mouse
14700787Ncdq1_mnevus cell density QTL 1 (mouse)92811129636111296Mouse
10043917Obq37_mobesity QTL 37 (mouse)Not determined91339117547391175Mouse
10043950Pbft5_mpercent body fat 5 (mouse)Not determined92030619754306370Mouse
1301782Chol11_mcholesterol 11 (mouse)Not determined92929292963293072Mouse
1300643Pvcan2_mprotection against vaginal candidiasis 2 (mouse)Not determined91994340653943525Mouse
11532694Sluc39a_msusceptibility to lung cancer 39a (mouse)92558748559587581Mouse
1300532Tbs2_mtuberculosis severity 2 (mouse)Not determined91236997046370114Mouse
1301439Morph2_mmorphine antinociception 2 (mouse)Not determined92015336254153492Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_020960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC161245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000217424
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl931,555,066 - 31,555,981 (+)Ensembl
GRCm38.p6 Ensembl931,643,770 - 31,644,685 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000111153 Ensembl, ENTREZGENE
MGD MGI:5011005 ENTREZGENE
NCBI Gene 100417780 ENTREZGENE
PhenoGen Gm18820 PhenoGen