Gm19716 (predicted gene, 19716) - Rat Genome Database

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Gene: Gm19716 (predicted gene, 19716) Mus musculus
Analyze
Symbol: Gm19716
Name: predicted gene, 19716
RGD ID: 5140170
MGI Page MGI
Description:
Type: pseudo (Ensembl: transcribed_processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Eif4b  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391459,879,997 - 59,881,833 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1459,879,997 - 59,881,833 (+)EnsemblGRCm39 Ensembl
GRCm381459,642,548 - 59,644,384 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1459,642,312 - 59,644,384 (+)EnsemblGRCm38mm10GRCm38
MGSCv371460,252,872 - 60,263,236 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1457,436,470 - 57,446,819 (+)NCBICelera
Cytogenetic Map14C3NCBI
cM Map1431.49NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm19716
60 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
4141484Hcbip1_mhexachlorobenzene induced porphyria 1 (mouse)Not determined4733525059962593Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
4142364Pbwg18_mpostnatal body weight growth 18 (mouse)Not determined145228198486282125Mouse
1301489Lbm10_mlean body mass 10 (mouse)Not determined145376129687761529Mouse
12880432Fgf23lq3_mFGF23 serum level QTL 3 (mouse)145393744087937440Mouse
10043889Cia52_mcollagen induced arthritis QTL 52 (mouse)Not determined145608238190082509Mouse
1301562Hwq1_mheart weight quantitative locus 1 (mouse)Not determined145654674590546941Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1458179640101859473Mouse

Markers in Region
D14Mit234  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381459,643,959 - 59,644,083UniSTSGRCm38
MGSCv371460,262,796 - 60,262,920UniSTSGRCm37
Celera1457,446,393 - 57,446,503UniSTS
cM Map1422.5UniSTS
Whitehead Genetic1431.7UniSTS
Whitehead/MRC_RH14676.41UniSTS
Whitehead_YAC14 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_028559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC123534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000224060
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1459,879,761 - 59,880,862 (+)Ensembl
GRCm38.p6 Ensembl1459,642,312 - 59,643,413 (+)Ensembl
RefSeq Acc Id: ENSMUST00000224256
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1459,879,997 - 59,881,833 (+)Ensembl
GRCm38.p6 Ensembl1459,642,548 - 59,644,384 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000114593 Ensembl, ENTREZGENE
MGD MGI:5011901 ENTREZGENE
NCBI Gene 100503479 ENTREZGENE
PhenoGen Gm19716 PhenoGen