MAP3K20-AS1 (MAP3K20 antisense RNA 1) - Rat Genome Database

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Gene: MAP3K20-AS1 (MAP3K20 antisense RNA 1) Homo sapiens
Analyze
Symbol: MAP3K20-AS1
Name: MAP3K20 antisense RNA 1
RGD ID: 5131771
HGNC Page HGNC:27935
Description: ASSOCIATED WITH centronuclear myopathy 6 with fiber-type disproportion; genetic disease; split hand-foot malformation; INTERACTS WITH bisphenol A; sodium arsenite
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: AC013461.2; MLK7 antisense RNA 1; MLK7-AS1
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382173,197,712 - 173,282,036 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2173,166,446 - 173,282,036 (-)EnsemblGRCh38hg38GRCh38
GRCh372174,062,440 - 174,146,764 (-)NCBIGRCh37GRCh37hg19GRCh37
Celera2167,675,853 - 167,760,178 (-)NCBICelera
Cytogenetic Map2q31.1NCBI
HuRef2165,941,854 - 166,026,211 (-)NCBIHuRef
CHM1_12174,069,501 - 174,153,968 (-)NCBICHM1_1
T2T-CHM13v2.02173,684,280 - 173,768,605 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
Additional References at PubMed
PMID:12477932   PMID:29428732  


Genomics

Variants

.
Variants in MAP3K20-AS1
299 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_016653.3(MAP3K20):c.817T>C (p.Cys273Arg) single nucleotide variant Split-foot malformation-mesoaxial polydactyly syndrome [RCV001332155] Chr2:173209801 [GRCh38]
Chr2:174074529 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.2(ZAK):c.1348A>G (p.Thr450Ala) single nucleotide variant Malignant melanoma [RCV000060402] Chr2:173239485 [GRCh38]
Chr2:174104213 [GRCh37]
Chr2:173812459 [NCBI36]
Chr2:2q31.1
not provided
NM_016653.3(MAP3K20):c.1103T>G (p.Phe368Cys) single nucleotide variant Split hand-foot malformation 1 [RCV000202370]|Split-foot malformation-mesoaxial polydactyly syndrome [RCV000210484] Chr2:173232359 [GRCh38]
Chr2:174097087 [GRCh37]
Chr2:2q31.1
pathogenic
GRCh38/hg38 2q31.1-32.2(chr2:171429233-189179568)x1 copy number loss See cases [RCV000136850] Chr2:171429233..189179568 [GRCh38]
Chr2:172285743..190044294 [GRCh37]
Chr2:171993989..189752539 [NCBI36]
Chr2:2q31.1-32.2
pathogenic
GRCh38/hg38 2q31.1-31.2(chr2:171513047-177854080)x1 copy number loss See cases [RCV000139646] Chr2:171513047..177854080 [GRCh38]
Chr2:172369557..178718807 [GRCh37]
Chr2:172077803..178427053 [NCBI36]
Chr2:2q31.1-31.2
pathogenic
GRCh38/hg38 2q24.1-31.1(chr2:154294042-175989372)x3 copy number gain See cases [RCV000142286] Chr2:154294042..175989372 [GRCh38]
Chr2:155150555..176854100 [GRCh37]
Chr2:154858801..176562346 [NCBI36]
Chr2:2q24.1-31.1
pathogenic
GRCh38/hg38 2q24.3-31.1(chr2:164850117-175559190)x1 copy number loss See cases [RCV000051201] Chr2:164850117..175559190 [GRCh38]
Chr2:165706627..176423918 [GRCh37]
Chr2:165414873..176132164 [NCBI36]
Chr2:2q24.3-31.1
pathogenic
GRCh38/hg38 2q31.1-31.2(chr2:172779876-177598000)x1 copy number loss See cases [RCV000050765] Chr2:172779876..177598000 [GRCh38]
Chr2:173644604..178462728 [GRCh37]
Chr2:173352850..178170974 [NCBI36]
Chr2:2q31.1-31.2
pathogenic
GRCh38/hg38 2q31.1(chr2:172366752-176361187)x1 copy number loss See cases [RCV000052554] Chr2:172366752..176361187 [GRCh38]
Chr2:173231480..177225915 [GRCh37]
Chr2:172939726..176934161 [NCBI36]
Chr2:2q31.1
pathogenic
GRCh38/hg38 2q24.3-32.1(chr2:163965382-182195062)x1 copy number loss See cases [RCV000054122] Chr2:163965382..182195062 [GRCh38]
Chr2:164821892..183059789 [GRCh37]
Chr2:164530138..182768034 [NCBI36]
Chr2:2q24.3-32.1
pathogenic
GRCh38/hg38 2q31.1-32.1(chr2:170407688-186189894)x1 copy number loss See cases [RCV000054127] Chr2:170407688..186189894 [GRCh38]
Chr2:171264198..187054621 [GRCh37]
Chr2:170972444..186762866 [NCBI36]
Chr2:2q31.1-32.1
pathogenic
NM_016653.2(MAP3K20):c.988-4814_1359+60del deletion Split-foot malformation-mesoaxial polydactyly syndrome [RCV000210488] Chr2:173224875..173239556 [GRCh38]
Chr2:174089603..174104284 [GRCh37]
Chr2:2q31.1
pathogenic
NM_016653.3(MAP3K20):c.1360-14_1360-9del deletion Split-foot malformation-mesoaxial polydactyly syndrome [RCV002488440]|not provided [RCV001609470] Chr2:173258681..173258686 [GRCh38]
Chr2:174123409..174123414 [GRCh37]
Chr2:2q31.1
benign|likely benign
NM_016653.3(MAP3K20):c.1360-111del deletion not provided [RCV001541521] Chr2:173258577 [GRCh38]
Chr2:174123305 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.745-82T>C single nucleotide variant not provided [RCV001667154] Chr2:173209647 [GRCh38]
Chr2:174074375 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.670-11G>C single nucleotide variant Myopathy, centronuclear, 6, with fiber-type disproportion [RCV001776254]|Split-foot malformation-mesoaxial polydactyly syndrome [RCV001776253]|not provided [RCV001534663] Chr2:173203785 [GRCh38]
Chr2:174068513 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.*48_*50dup duplication not provided [RCV001679591] Chr2:173266783..173266784 [GRCh38]
Chr2:174131511..174131512 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.748C>T (p.Arg250Trp) single nucleotide variant Split-foot malformation-mesoaxial polydactyly syndrome [RCV003987695]|not provided [RCV000762290] Chr2:173209732 [GRCh38]
Chr2:174074460 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.*50dup duplication not provided [RCV001681534] Chr2:173266783..173266784 [GRCh38]
Chr2:174131511..174131512 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.2047C>T (p.Arg683Cys) single nucleotide variant MAP3K20-related condition [RCV003910751]|not provided [RCV000901114] Chr2:173266394 [GRCh38]
Chr2:174131122 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1346G>A (p.Gly449Glu) single nucleotide variant MAP3K20-related condition [RCV003923132]|not provided [RCV000910183] Chr2:173239483 [GRCh38]
Chr2:174104211 [GRCh37]
Chr2:2q31.1
benign|likely benign|conflicting interpretations of pathogenicity
NM_016653.3(MAP3K20):c.987+4307C>T single nucleotide variant not provided [RCV001721618] Chr2:173221557 [GRCh38]
Chr2:174086285 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1359+134T>C single nucleotide variant not provided [RCV001639146] Chr2:173239630 [GRCh38]
Chr2:174104358 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.745-104T>G single nucleotide variant not provided [RCV001649001] Chr2:173209625 [GRCh38]
Chr2:174074353 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.*50del deletion not provided [RCV001687581] Chr2:173266784 [GRCh38]
Chr2:174131512 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1032+113G>T single nucleotide variant not provided [RCV001647683] Chr2:173229846 [GRCh38]
Chr2:174094574 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1702+182A>G single nucleotide variant not provided [RCV001658434] Chr2:173264077 [GRCh38]
Chr2:174128805 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.2205G>C (p.Arg735Ser) single nucleotide variant not provided [RCV000974045] Chr2:173266552 [GRCh38]
Chr2:174131280 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2351A>C (p.Lys784Thr) single nucleotide variant not provided [RCV000974934] Chr2:173266698 [GRCh38]
Chr2:174131426 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.843G>A (p.Ala281=) single nucleotide variant not provided [RCV000953249] Chr2:173209827 [GRCh38]
Chr2:174074555 [GRCh37]
Chr2:2q31.1
benign|likely benign
NM_016653.3(MAP3K20):c.800C>T (p.Thr267Met) single nucleotide variant not provided [RCV000956003] Chr2:173209784 [GRCh38]
Chr2:174074512 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.897T>C (p.Arg299=) single nucleotide variant not provided [RCV000912655] Chr2:173217160 [GRCh38]
Chr2:174081888 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.*47A>G single nucleotide variant not provided [RCV001620937] Chr2:173266797 [GRCh38]
Chr2:174131525 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.*49_*50dup duplication not provided [RCV001636166] Chr2:173266783..173266784 [GRCh38]
Chr2:174131511..174131512 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1267-81dup duplication not provided [RCV001675507] Chr2:173239309..173239310 [GRCh38]
Chr2:174104037..174104038 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.987+3763A>G single nucleotide variant not provided [RCV001641906] Chr2:173221013 [GRCh38]
Chr2:174085741 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1122A>G (p.Thr374=) single nucleotide variant not provided [RCV001617255] Chr2:173232378 [GRCh38]
Chr2:174097106 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.987+122C>G single nucleotide variant not provided [RCV001684165] Chr2:173217372 [GRCh38]
Chr2:174082100 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1032+39G>A single nucleotide variant Myopathy, centronuclear, 6, with fiber-type disproportion [RCV001776282]|Split-foot malformation-mesoaxial polydactyly syndrome [RCV001776281]|not provided [RCV001680126] Chr2:173229772 [GRCh38]
Chr2:174094500 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.988-72A>T single nucleotide variant not provided [RCV001612190] Chr2:173229617 [GRCh38]
Chr2:174094345 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.583-159A>G single nucleotide variant not provided [RCV001610976] Chr2:173197867 [GRCh38]
Chr2:174062595 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1551+95T>C single nucleotide variant not provided [RCV001707305] Chr2:173261232 [GRCh38]
Chr2:174125960 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1674T>C (p.Asp558=) single nucleotide variant not provided [RCV001609870] Chr2:173263867 [GRCh38]
Chr2:174128595 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1552-203A>T single nucleotide variant not provided [RCV001671510] Chr2:173263542 [GRCh38]
Chr2:174128270 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1266+203T>C single nucleotide variant not provided [RCV001616378] Chr2:173238638 [GRCh38]
Chr2:174103366 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.2317T>C (p.Tyr773His) single nucleotide variant not provided [RCV001641578] Chr2:173266664 [GRCh38]
Chr2:174131392 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.2263A>T (p.Arg755Ter) single nucleotide variant Myopathy, centronuclear, 6, with fiber-type disproportion [RCV001332154] Chr2:173266610 [GRCh38]
Chr2:174131338 [GRCh37]
Chr2:2q31.1
pathogenic
NM_016653.3(MAP3K20):c.987+3769C>T single nucleotide variant not provided [RCV001538977] Chr2:173221019 [GRCh38]
Chr2:174085747 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1360-28A>G single nucleotide variant Myopathy, centronuclear, 6, with fiber-type disproportion [RCV001776297]|Split-foot malformation-mesoaxial polydactyly syndrome [RCV001776296]|not provided [RCV001693152] Chr2:173258671 [GRCh38]
Chr2:174123399 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1263T>C (p.Ile421=) single nucleotide variant not provided [RCV001671305] Chr2:173238432 [GRCh38]
Chr2:174103160 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1738C>T (p.Arg580Trp) single nucleotide variant not provided [RCV001666838] Chr2:173266085 [GRCh38]
Chr2:174130813 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.745-50A>G single nucleotide variant not provided [RCV001617305] Chr2:173209679 [GRCh38]
Chr2:174074407 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1360-154A>C single nucleotide variant not provided [RCV001691832] Chr2:173258545 [GRCh38]
Chr2:174123273 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1592C>T (p.Ser531Leu) single nucleotide variant MAP3K20-related condition [RCV003975924]|Myopathy, centronuclear, 6, with fiber-type disproportion [RCV001776280]|Split-foot malformation-mesoaxial polydactyly syndrome [RCV001776279]|not provided [RCV001685590] Chr2:173263785 [GRCh38]
Chr2:174128513 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1032+190T>C single nucleotide variant not provided [RCV001710445] Chr2:173229923 [GRCh38]
Chr2:174094651 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.2347G>A (p.Ala783Thr) single nucleotide variant not provided [RCV003108778] Chr2:173266694 [GRCh38]
Chr2:174131422 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2270G>C (p.Ser757Thr) single nucleotide variant not provided [RCV003107033] Chr2:173266617 [GRCh38]
Chr2:174131345 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1997C>A (p.Thr666Asn) single nucleotide variant not provided [RCV003104566] Chr2:173266344 [GRCh38]
Chr2:174131072 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.719A>C (p.His240Pro) single nucleotide variant not provided [RCV003104550] Chr2:173203845 [GRCh38]
Chr2:174068573 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.834CAA[1] (p.Asn279del) microsatellite MAP3K20-related condition [RCV001788990] Chr2:173209817..173209819 [GRCh38]
Chr2:174074545..174074547 [GRCh37]
Chr2:2q31.1
likely pathogenic
NM_016653.3(MAP3K20):c.1270_1272del (p.Ser424del) deletion not provided [RCV001889335] Chr2:173239407..173239409 [GRCh38]
Chr2:174104135..174104137 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1517A>G (p.Lys506Arg) single nucleotide variant not provided [RCV001915534] Chr2:173261103 [GRCh38]
Chr2:174125831 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2320C>T (p.Arg774Trp) single nucleotide variant not provided [RCV002045611] Chr2:173266667 [GRCh38]
Chr2:174131395 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1054G>A (p.Val352Ile) single nucleotide variant not provided [RCV001915466] Chr2:173232213 [GRCh38]
Chr2:174096941 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2128T>C (p.Tyr710His) single nucleotide variant not provided [RCV002045474] Chr2:173266475 [GRCh38]
Chr2:174131203 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2266G>A (p.Ala756Thr) single nucleotide variant not provided [RCV002022804] Chr2:173266613 [GRCh38]
Chr2:174131341 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1064G>A (p.Gly355Asp) single nucleotide variant not provided [RCV001929435] Chr2:173232320 [GRCh38]
Chr2:174097048 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.670-11_670-10del deletion not provided [RCV001874871] Chr2:173203784..173203785 [GRCh38]
Chr2:174068512..174068513 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1388T>C (p.Met463Thr) single nucleotide variant not provided [RCV002020812] Chr2:173258727 [GRCh38]
Chr2:174123455 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2056A>G (p.Ile686Val) single nucleotide variant not provided [RCV001949170] Chr2:173266403 [GRCh38]
Chr2:174131131 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.676A>G (p.Thr226Ala) single nucleotide variant not provided [RCV001874396] Chr2:173203802 [GRCh38]
Chr2:174068530 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.842C>T (p.Ala281Val) single nucleotide variant not provided [RCV001914641] Chr2:173209826 [GRCh38]
Chr2:174074554 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.754T>A (p.Ser252Thr) single nucleotide variant not provided [RCV001892139] Chr2:173209738 [GRCh38]
Chr2:174074466 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1843G>T (p.Val615Leu) single nucleotide variant not provided [RCV001929091] Chr2:173266190 [GRCh38]
Chr2:174130918 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.2014C>T (p.Arg672Ter) single nucleotide variant not provided [RCV001871074] Chr2:173266361 [GRCh38]
Chr2:174131089 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.890T>G (p.Leu297Arg) single nucleotide variant not provided [RCV001966377] Chr2:173217153 [GRCh38]
Chr2:174081881 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1389G>T (p.Met463Ile) single nucleotide variant not provided [RCV001968865] Chr2:173258728 [GRCh38]
Chr2:174123456 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1357C>T (p.Gln453Ter) single nucleotide variant not provided [RCV001889908] Chr2:173239494 [GRCh38]
Chr2:174104222 [GRCh37]
Chr2:2q31.1
pathogenic
NM_016653.3(MAP3K20):c.1036T>C (p.Cys346Arg) single nucleotide variant not provided [RCV002022709] Chr2:173232195 [GRCh38]
Chr2:174096923 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.670-11_670-8del deletion not provided [RCV002024020] Chr2:173203782..173203785 [GRCh38]
Chr2:174068510..174068513 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1540G>A (p.Val514Ile) single nucleotide variant not provided [RCV001966117] Chr2:173261126 [GRCh38]
Chr2:174125854 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.875A>T (p.Glu292Val) single nucleotide variant not provided [RCV002043616] Chr2:173217138 [GRCh38]
Chr2:174081866 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.878G>A (p.Arg293Lys) single nucleotide variant not provided [RCV001871146] Chr2:173217141 [GRCh38]
Chr2:174081869 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.586C>G (p.Leu196Val) single nucleotide variant not provided [RCV001892092] Chr2:173198029 [GRCh38]
Chr2:174062757 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1900A>G (p.Arg634Gly) single nucleotide variant See cases [RCV002252757]|not provided [RCV002024242] Chr2:173266247 [GRCh38]
Chr2:174130975 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1393G>A (p.Gly465Arg) single nucleotide variant not provided [RCV001890670] Chr2:173258732 [GRCh38]
Chr2:174123460 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1130G>A (p.Arg377Gln) single nucleotide variant Inborn genetic diseases [RCV002555208]|not provided [RCV001893404] Chr2:173232386 [GRCh38]
Chr2:174097114 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1228G>A (p.Asp410Asn) single nucleotide variant not provided [RCV001926716] Chr2:173238397 [GRCh38]
Chr2:174103125 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1607G>A (p.Arg536Lys) single nucleotide variant Inborn genetic diseases [RCV002548175]|not provided [RCV002043197] Chr2:173263800 [GRCh38]
Chr2:174128528 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1696G>A (p.Asp566Asn) single nucleotide variant not provided [RCV001945234] Chr2:173263889 [GRCh38]
Chr2:174128617 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1313_1343dup (p.Pro452fs) duplication not provided [RCV001946648] Chr2:173239445..173239446 [GRCh38]
Chr2:174104173..174104174 [GRCh37]
Chr2:2q31.1
pathogenic
NM_016653.3(MAP3K20):c.1592_1593delinsAT (p.Ser531Tyr) indel not provided [RCV001890679] Chr2:173263785..173263786 [GRCh38]
Chr2:174128513..174128514 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1786A>G (p.Ile596Val) single nucleotide variant not provided [RCV001944635] Chr2:173266133 [GRCh38]
Chr2:174130861 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1849C>T (p.Arg617Trp) single nucleotide variant not provided [RCV002011009] Chr2:173266196 [GRCh38]
Chr2:174130924 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1600T>C (p.Trp534Arg) single nucleotide variant not provided [RCV001961572] Chr2:173263793 [GRCh38]
Chr2:174128521 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2192A>G (p.Lys731Arg) single nucleotide variant not provided [RCV002019199] Chr2:173266539 [GRCh38]
Chr2:174131267 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2096A>G (p.Lys699Arg) single nucleotide variant not provided [RCV001977871] Chr2:173266443 [GRCh38]
Chr2:174131171 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1268A>G (p.Asp423Gly) single nucleotide variant not provided [RCV001932421] Chr2:173239405 [GRCh38]
Chr2:174104133 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1712G>A (p.Cys571Tyr) single nucleotide variant not provided [RCV002027019] Chr2:173266059 [GRCh38]
Chr2:174130787 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2308A>G (p.Lys770Glu) single nucleotide variant not provided [RCV001898100] Chr2:173266655 [GRCh38]
Chr2:174131383 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.623G>A (p.Gly208Asp) single nucleotide variant not provided [RCV002047136] Chr2:173198066 [GRCh38]
Chr2:174062794 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1481C>G (p.Pro494Arg) single nucleotide variant not provided [RCV002016336] Chr2:173261067 [GRCh38]
Chr2:174125795 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2175C>A (p.His725Gln) single nucleotide variant not provided [RCV002047231] Chr2:173266522 [GRCh38]
Chr2:174131250 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.983C>T (p.Thr328Ile) single nucleotide variant not provided [RCV001866361] Chr2:173217246 [GRCh38]
Chr2:174081974 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1810C>T (p.His604Tyr) single nucleotide variant not provided [RCV002047219] Chr2:173266157 [GRCh38]
Chr2:174130885 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2342C>T (p.Ser781Phe) single nucleotide variant not provided [RCV002013404] Chr2:173266689 [GRCh38]
Chr2:174131417 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1225C>T (p.His409Tyr) single nucleotide variant not provided [RCV002030149] Chr2:173238394 [GRCh38]
Chr2:174103122 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1656ATT[1] (p.Leu553del) microsatellite not provided [RCV002030197] Chr2:173263849..173263851 [GRCh38]
Chr2:174128577..174128579 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1360-17_1360-15del deletion not provided [RCV002030455] Chr2:173258681..173258683 [GRCh38]
Chr2:174123409..174123411 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.874G>C (p.Glu292Gln) single nucleotide variant not provided [RCV001906936] Chr2:173217137 [GRCh38]
Chr2:174081865 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2012G>T (p.Gly671Val) single nucleotide variant not provided [RCV001921494] Chr2:173266359 [GRCh38]
Chr2:174131087 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.941G>A (p.Arg314His) single nucleotide variant not provided [RCV001999500] Chr2:173217204 [GRCh38]
Chr2:174081932 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.702T>A (p.Ser234Arg) single nucleotide variant not provided [RCV001976724] Chr2:173203828 [GRCh38]
Chr2:174068556 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1825G>A (p.Asp609Asn) single nucleotide variant not provided [RCV001902150] Chr2:173266172 [GRCh38]
Chr2:174130900 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1694C>T (p.Ser565Phe) single nucleotide variant not provided [RCV002017891] Chr2:173263887 [GRCh38]
Chr2:174128615 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1903A>C (p.Ser635Arg) single nucleotide variant not provided [RCV002047469] Chr2:173266250 [GRCh38]
Chr2:174130978 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.800C>G (p.Thr267Arg) single nucleotide variant not provided [RCV001916051] Chr2:173209784 [GRCh38]
Chr2:174074512 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2066A>G (p.Asn689Ser) single nucleotide variant not provided [RCV002029232] Chr2:173266413 [GRCh38]
Chr2:174131141 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.2009G>A (p.Arg670Lys) single nucleotide variant not provided [RCV001960801] Chr2:173266356 [GRCh38]
Chr2:174131084 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2354C>A (p.Thr785Asn) single nucleotide variant not provided [RCV001959702] Chr2:173266701 [GRCh38]
Chr2:174131429 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1303A>T (p.Ile435Leu) single nucleotide variant not provided [RCV001980214] Chr2:173239440 [GRCh38]
Chr2:174104168 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1769G>A (p.Arg590His) single nucleotide variant not provided [RCV001960010] Chr2:173266116 [GRCh38]
Chr2:174130844 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1307T>G (p.Val436Gly) single nucleotide variant not provided [RCV002035795] Chr2:173239444 [GRCh38]
Chr2:174104172 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1677C>T (p.Gly559=) single nucleotide variant not provided [RCV001926233] Chr2:173263870 [GRCh38]
Chr2:174128598 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1027G>A (p.Asp343Asn) single nucleotide variant not provided [RCV001924679] Chr2:173229728 [GRCh38]
Chr2:174094456 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.829C>G (p.Leu277Val) single nucleotide variant not provided [RCV001906550] Chr2:173209813 [GRCh38]
Chr2:174074541 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1216A>C (p.Lys406Gln) single nucleotide variant not provided [RCV002019564] Chr2:173238385 [GRCh38]
Chr2:174103113 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2334C>A (p.His778Gln) single nucleotide variant not provided [RCV001925845] Chr2:173266681 [GRCh38]
Chr2:174131409 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2382C>A (p.His794Gln) single nucleotide variant not provided [RCV001972950] Chr2:173266729 [GRCh38]
Chr2:174131457 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.871C>T (p.Leu291Phe) single nucleotide variant not provided [RCV001957720] Chr2:173217134 [GRCh38]
Chr2:174081862 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.693C>G (p.Cys231Trp) single nucleotide variant not provided [RCV002016402] Chr2:173203819 [GRCh38]
Chr2:174068547 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1739G>A (p.Arg580Gln) single nucleotide variant not provided [RCV001898290] Chr2:173266086 [GRCh38]
Chr2:174130814 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2297G>T (p.Gly766Val) single nucleotide variant not provided [RCV001922814] Chr2:173266644 [GRCh38]
Chr2:174131372 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1082T>C (p.Met361Thr) single nucleotide variant not provided [RCV001935003] Chr2:173232338 [GRCh38]
Chr2:174097066 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1281A>C (p.Glu427Asp) single nucleotide variant not provided [RCV001996195] Chr2:173239418 [GRCh38]
Chr2:174104146 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2254A>G (p.Thr752Ala) single nucleotide variant not provided [RCV001901990] Chr2:173266601 [GRCh38]
Chr2:174131329 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2275G>A (p.Glu759Lys) single nucleotide variant not provided [RCV001938114] Chr2:173266622 [GRCh38]
Chr2:174131350 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1476+17G>A single nucleotide variant not provided [RCV002126621] Chr2:173258832 [GRCh38]
Chr2:174123560 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1360-10_1360-9del deletion not provided [RCV002128427] Chr2:173258686..173258687 [GRCh38]
Chr2:174123414..174123415 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1581A>G (p.Lys527=) single nucleotide variant not provided [RCV002185012] Chr2:173263774 [GRCh38]
Chr2:174128502 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.744+8T>C single nucleotide variant not provided [RCV002108732] Chr2:173203878 [GRCh38]
Chr2:174068606 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.988-5T>C single nucleotide variant not provided [RCV002146070] Chr2:173229684 [GRCh38]
Chr2:174094412 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1203+19A>C single nucleotide variant not provided [RCV002126147] Chr2:173232478 [GRCh38]
Chr2:174097206 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1552-10G>C single nucleotide variant not provided [RCV002187392] Chr2:173263735 [GRCh38]
Chr2:174128463 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1542C>G (p.Val514=) single nucleotide variant not provided [RCV002148713] Chr2:173261128 [GRCh38]
Chr2:174125856 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1020G>C (p.Thr340=) single nucleotide variant not provided [RCV002075823] Chr2:173229721 [GRCh38]
Chr2:174094449 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.612C>T (p.Val204=) single nucleotide variant not provided [RCV002089104] Chr2:173198055 [GRCh38]
Chr2:174062783 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1545A>T (p.Thr515=) single nucleotide variant not provided [RCV002189508] Chr2:173261131 [GRCh38]
Chr2:174125859 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.625T>C (p.Leu209=) single nucleotide variant not provided [RCV002108240] Chr2:173198068 [GRCh38]
Chr2:174062796 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1203+18A>G single nucleotide variant not provided [RCV002075189] Chr2:173232477 [GRCh38]
Chr2:174097205 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1552-18G>A single nucleotide variant not provided [RCV002185746] Chr2:173263727 [GRCh38]
Chr2:174128455 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1019C>T (p.Thr340Met) single nucleotide variant not provided [RCV002210724] Chr2:173229720 [GRCh38]
Chr2:174094448 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1362T>C (p.Asp454=) single nucleotide variant not provided [RCV002170916] Chr2:173258701 [GRCh38]
Chr2:174123429 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1267-8T>C single nucleotide variant not provided [RCV002185219] Chr2:173239396 [GRCh38]
Chr2:174104124 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1410A>C (p.Ile470=) single nucleotide variant not provided [RCV002091279] Chr2:173258749 [GRCh38]
Chr2:174123477 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.758T>C (p.Phe253Ser) single nucleotide variant not provided [RCV002112618] Chr2:173209742 [GRCh38]
Chr2:174074470 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.909T>C (p.Phe303=) single nucleotide variant not provided [RCV002076087] Chr2:173217172 [GRCh38]
Chr2:174081900 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1962T>C (p.Ser654=) single nucleotide variant not provided [RCV002129566] Chr2:173266309 [GRCh38]
Chr2:174131037 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2147G>A (p.Arg716Lys) single nucleotide variant not provided [RCV002111645] Chr2:173266494 [GRCh38]
Chr2:174131222 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1640A>T (p.Gln547Leu) single nucleotide variant not provided [RCV002212120] Chr2:173263833 [GRCh38]
Chr2:174128561 [GRCh37]
Chr2:2q31.1
likely benign|conflicting interpretations of pathogenicity
NM_016653.3(MAP3K20):c.645T>C (p.Ala215=) single nucleotide variant not provided [RCV002187460] Chr2:173198088 [GRCh38]
Chr2:174062816 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1360-9del deletion not provided [RCV002087250] Chr2:173258686 [GRCh38]
Chr2:174123414 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.744+9A>G single nucleotide variant not provided [RCV002115613]|not specified [RCV003235675] Chr2:173203879 [GRCh38]
Chr2:174068607 [GRCh37]
Chr2:2q31.1
benign|uncertain significance
NM_016653.3(MAP3K20):c.745-14T>G single nucleotide variant not provided [RCV002166599] Chr2:173209715 [GRCh38]
Chr2:174074443 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.750G>T (p.Arg250=) single nucleotide variant not provided [RCV002092481] Chr2:173209734 [GRCh38]
Chr2:174074462 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1986C>T (p.Gly662=) single nucleotide variant not provided [RCV002134252] Chr2:173266333 [GRCh38]
Chr2:174131061 [GRCh37]
Chr2:2q31.1
benign|likely benign
NM_016653.3(MAP3K20):c.1703-4G>C single nucleotide variant not provided [RCV002127101] Chr2:173266046 [GRCh38]
Chr2:174130774 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.987+4066A>T single nucleotide variant not provided [RCV002214180] Chr2:173221316 [GRCh38]
Chr2:174086044 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2034G>A (p.Arg678=) single nucleotide variant not provided [RCV002196600] Chr2:173266381 [GRCh38]
Chr2:174131109 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2293G>A (p.Glu765Lys) single nucleotide variant not provided [RCV002094267] Chr2:173266640 [GRCh38]
Chr2:174131368 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1359+8A>G single nucleotide variant not provided [RCV002144983] Chr2:173239504 [GRCh38]
Chr2:174104232 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.583-18A>G single nucleotide variant not provided [RCV002096944] Chr2:173198008 [GRCh38]
Chr2:174062736 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.2346C>T (p.Pro782=) single nucleotide variant not provided [RCV002133444] Chr2:173266693 [GRCh38]
Chr2:174131421 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1455G>A (p.Ala485=) single nucleotide variant not provided [RCV002113189] Chr2:173258794 [GRCh38]
Chr2:174123522 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.851+13G>A single nucleotide variant not provided [RCV002149835] Chr2:173209848 [GRCh38]
Chr2:174074576 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1360-14_1360-12del deletion not provided [RCV002121033] Chr2:173258683..173258685 [GRCh38]
Chr2:174123411..174123413 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1032+14A>C single nucleotide variant not provided [RCV002179165] Chr2:173229747 [GRCh38]
Chr2:174094475 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1064-17C>G single nucleotide variant not provided [RCV002201389] Chr2:173232303 [GRCh38]
Chr2:174097031 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2184T>C (p.Pro728=) single nucleotide variant not provided [RCV002197914] Chr2:173266531 [GRCh38]
Chr2:174131259 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.987+15C>T single nucleotide variant not provided [RCV002176326] Chr2:173217265 [GRCh38]
Chr2:174081993 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1773C>T (p.Ser591=) single nucleotide variant not provided [RCV002142639] Chr2:173266120 [GRCh38]
Chr2:174130848 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.852-20C>A single nucleotide variant not provided [RCV002142660] Chr2:173217095 [GRCh38]
Chr2:174081823 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1204-17T>C single nucleotide variant not provided [RCV002154320] Chr2:173238356 [GRCh38]
Chr2:174103084 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.819T>C (p.Cys273=) single nucleotide variant not provided [RCV002143105] Chr2:173209803 [GRCh38]
Chr2:174074531 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1360-11_1360-9del deletion not provided [RCV002163877] Chr2:173258686..173258688 [GRCh38]
Chr2:174123414..174123416 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1552-18GTTT[2] microsatellite not provided [RCV002201236] Chr2:173263727..173263730 [GRCh38]
Chr2:174128455..174128458 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1914T>C (p.Pro638=) single nucleotide variant not provided [RCV002144067] Chr2:173266261 [GRCh38]
Chr2:174130989 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1063+12A>G single nucleotide variant not provided [RCV002139742] Chr2:173232234 [GRCh38]
Chr2:174096962 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.870T>C (p.Thr290=) single nucleotide variant not provided [RCV002122222] Chr2:173217133 [GRCh38]
Chr2:174081861 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1033-10T>C single nucleotide variant not provided [RCV002199513] Chr2:173232182 [GRCh38]
Chr2:174096910 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1833C>T (p.Tyr611=) single nucleotide variant not provided [RCV002081455] Chr2:173266180 [GRCh38]
Chr2:174130908 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1552-10G>A single nucleotide variant not provided [RCV002117816] Chr2:173263735 [GRCh38]
Chr2:174128463 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1695C>T (p.Ser565=) single nucleotide variant not provided [RCV002135878] Chr2:173263888 [GRCh38]
Chr2:174128616 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1204-6T>C single nucleotide variant MAP3K20-related condition [RCV003971115]|not provided [RCV002154279] Chr2:173238367 [GRCh38]
Chr2:174103095 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1204-5dup duplication not provided [RCV002102718] Chr2:173238360..173238361 [GRCh38]
Chr2:174103088..174103089 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1824G>A (p.Gln608=) single nucleotide variant not provided [RCV002220210] Chr2:173266171 [GRCh38]
Chr2:174130899 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.987+15C>G single nucleotide variant not provided [RCV002161312] Chr2:173217265 [GRCh38]
Chr2:174081993 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.967A>T (p.Thr323Ser) single nucleotide variant not provided [RCV003121875] Chr2:173217230 [GRCh38]
Chr2:174081958 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1592C>A (p.Ser531Ter) single nucleotide variant Split-foot malformation-mesoaxial polydactyly syndrome [RCV002279880] Chr2:173263785 [GRCh38]
Chr2:174128513 [GRCh37]
Chr2:2q31.1
pathogenic
NM_016653.3(MAP3K20):c.987+9C>T single nucleotide variant not provided [RCV002903065] Chr2:173217259 [GRCh38]
Chr2:174081987 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1894C>T (p.Gln632Ter) single nucleotide variant not provided [RCV003099107]|not specified [RCV002308527] Chr2:173266241 [GRCh38]
Chr2:174130969 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1812C>T (p.His604=) single nucleotide variant not provided [RCV002971033] Chr2:173266159 [GRCh38]
Chr2:174130887 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1552-19C>T single nucleotide variant not provided [RCV002614708] Chr2:173263726 [GRCh38]
Chr2:174128454 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1523A>C (p.Gln508Pro) single nucleotide variant not provided [RCV002617028] Chr2:173261109 [GRCh38]
Chr2:174125837 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2130C>T (p.Tyr710=) single nucleotide variant not provided [RCV002681658] Chr2:173266477 [GRCh38]
Chr2:174131205 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1083G>A (p.Met361Ile) single nucleotide variant not provided [RCV002618831] Chr2:173232339 [GRCh38]
Chr2:174097067 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1702+7_1702+10del deletion not provided [RCV002902996] Chr2:173263899..173263902 [GRCh38]
Chr2:174128627..174128630 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.2368G>T (p.Ala790Ser) single nucleotide variant not provided [RCV003014461] Chr2:173266715 [GRCh38]
Chr2:174131443 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1164C>G (p.Asp388Glu) single nucleotide variant not provided [RCV003074633] Chr2:173232420 [GRCh38]
Chr2:174097148 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2215C>T (p.Gln739Ter) single nucleotide variant not provided [RCV002681503] Chr2:173266562 [GRCh38]
Chr2:174131290 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.905G>A (p.Ser302Asn) single nucleotide variant not provided [RCV003097510] Chr2:173217168 [GRCh38]
Chr2:174081896 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1648A>T (p.Ile550Phe) single nucleotide variant not provided [RCV002819494] Chr2:173263841 [GRCh38]
Chr2:174128569 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1234A>G (p.Ile412Val) single nucleotide variant not provided [RCV002614647] Chr2:173238403 [GRCh38]
Chr2:174103131 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2068TCT[1] (p.Ser691del) microsatellite not provided [RCV002614025] Chr2:173266414..173266416 [GRCh38]
Chr2:174131142..174131144 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1653_1658del (p.Thr552_Leu553del) deletion not provided [RCV002662974] Chr2:173263846..173263851 [GRCh38]
Chr2:174128574..174128579 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1702A>G (p.Ser568Gly) single nucleotide variant not provided [RCV002622878] Chr2:173263895 [GRCh38]
Chr2:174128623 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.670-12_670-11delinsGC indel not provided [RCV002696284] Chr2:173203784..173203785 [GRCh38]
Chr2:174068512..174068513 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.669+12T>G single nucleotide variant not provided [RCV002593336] Chr2:173198124 [GRCh38]
Chr2:174062852 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NC_000002.12:g.173263743AG[1] microsatellite not provided [RCV002824681] Chr2:173263743..173263744 [GRCh38]
Chr2:174128471..174128472 [GRCh37]
Chr2:2q31.1
pathogenic
NM_016653.3(MAP3K20):c.1947C>T (p.Ser649=) single nucleotide variant not provided [RCV002593024] Chr2:173266294 [GRCh38]
Chr2:174131022 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1267-15G>T single nucleotide variant not provided [RCV002662881] Chr2:173239389 [GRCh38]
Chr2:174104117 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.801G>A (p.Thr267=) single nucleotide variant not provided [RCV002781143] Chr2:173209785 [GRCh38]
Chr2:174074513 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1528G>A (p.Val510Met) single nucleotide variant not provided [RCV002705572] Chr2:173261114 [GRCh38]
Chr2:174125842 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1087G>A (p.Val363Ile) single nucleotide variant not provided [RCV002909513] Chr2:173232343 [GRCh38]
Chr2:174097071 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1275A>G (p.Gly425=) single nucleotide variant not provided [RCV002796385] Chr2:173239412 [GRCh38]
Chr2:174104140 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1143G>A (p.Leu381=) single nucleotide variant not provided [RCV003078451] Chr2:173232399 [GRCh38]
Chr2:174097127 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2181G>A (p.Ser727=) single nucleotide variant not provided [RCV002999198] Chr2:173266528 [GRCh38]
Chr2:174131256 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1447C>A (p.Pro483Thr) single nucleotide variant not provided [RCV002640153] Chr2:173258786 [GRCh38]
Chr2:174123514 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1907C>T (p.Ser636Leu) single nucleotide variant not provided [RCV002639797] Chr2:173266254 [GRCh38]
Chr2:174130982 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1360-14_1360-11del deletion not provided [RCV002695205] Chr2:173258682..173258685 [GRCh38]
Chr2:174123410..174123413 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1000T>C (p.Phe334Leu) single nucleotide variant not provided [RCV002735756] Chr2:173229701 [GRCh38]
Chr2:174094429 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.852-14C>G single nucleotide variant not provided [RCV003018632] Chr2:173217101 [GRCh38]
Chr2:174081829 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2242T>C (p.Leu748=) single nucleotide variant not provided [RCV003077610] Chr2:173266589 [GRCh38]
Chr2:174131317 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2384G>A (p.Arg795His) single nucleotide variant not provided [RCV002913890] Chr2:173266731 [GRCh38]
Chr2:174131459 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1125G>A (p.Gly375=) single nucleotide variant not provided [RCV002866193] Chr2:173232381 [GRCh38]
Chr2:174097109 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.851+12C>T single nucleotide variant not provided [RCV002575660] Chr2:173209847 [GRCh38]
Chr2:174074575 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1476+16C>T single nucleotide variant not provided [RCV002575286] Chr2:173258831 [GRCh38]
Chr2:174123559 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1476+2T>A single nucleotide variant not provided [RCV002642240] Chr2:173258817 [GRCh38]
Chr2:174123545 [GRCh37]
Chr2:2q31.1
likely pathogenic
NM_016653.3(MAP3K20):c.1359+18T>C single nucleotide variant not provided [RCV002627268] Chr2:173239514 [GRCh38]
Chr2:174104242 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1063+2C>T single nucleotide variant not provided [RCV002596413] Chr2:173232224 [GRCh38]
Chr2:174096952 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.862G>A (p.Glu288Lys) single nucleotide variant not provided [RCV002932965] Chr2:173217125 [GRCh38]
Chr2:174081853 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.851+8G>A single nucleotide variant not provided [RCV002875951] Chr2:173209843 [GRCh38]
Chr2:174074571 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1850G>T (p.Arg617Leu) single nucleotide variant not provided [RCV002828659] Chr2:173266197 [GRCh38]
Chr2:174130925 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.705T>C (p.Phe235=) single nucleotide variant not provided [RCV002663546] Chr2:173203831 [GRCh38]
Chr2:174068559 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1817A>G (p.Asp606Gly) single nucleotide variant not provided [RCV002740664] Chr2:173266164 [GRCh38]
Chr2:174130892 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1992T>G (p.Thr664=) single nucleotide variant not provided [RCV003042033] Chr2:173266339 [GRCh38]
Chr2:174131067 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1032+10T>C single nucleotide variant not provided [RCV002800791] Chr2:173229743 [GRCh38]
Chr2:174094471 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2336G>A (p.Arg779Lys) single nucleotide variant not provided [RCV002710077] Chr2:173266683 [GRCh38]
Chr2:174131411 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.619A>C (p.Lys207Gln) single nucleotide variant not provided [RCV002851620] Chr2:173198062 [GRCh38]
Chr2:174062790 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.948G>A (p.Lys316=) single nucleotide variant not provided [RCV002574445] Chr2:173217211 [GRCh38]
Chr2:174081939 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.670-4G>A single nucleotide variant not provided [RCV002623948] Chr2:173203792 [GRCh38]
Chr2:174068520 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1601G>A (p.Trp534Ter) single nucleotide variant not provided [RCV003023309] Chr2:173263794 [GRCh38]
Chr2:174128522 [GRCh37]
Chr2:2q31.1
pathogenic
NM_016653.3(MAP3K20):c.718C>T (p.His240Tyr) single nucleotide variant not provided [RCV002626293] Chr2:173203844 [GRCh38]
Chr2:174068572 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2170C>T (p.Pro724Ser) single nucleotide variant not provided [RCV002642538] Chr2:173266517 [GRCh38]
Chr2:174131245 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1064-6del deletion not provided [RCV002741258] Chr2:173232313 [GRCh38]
Chr2:174097041 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2079A>G (p.Arg693=) single nucleotide variant not provided [RCV002593479] Chr2:173266426 [GRCh38]
Chr2:174131154 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.744+10T>C single nucleotide variant not provided [RCV002700806] Chr2:173203880 [GRCh38]
Chr2:174068608 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1800G>A (p.Pro600=) single nucleotide variant not provided [RCV002643360] Chr2:173266147 [GRCh38]
Chr2:174130875 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2377G>A (p.Asp793Asn) single nucleotide variant not provided [RCV002835381] Chr2:173266724 [GRCh38]
Chr2:174131452 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1061A>G (p.Lys354Arg) single nucleotide variant not provided [RCV002631031] Chr2:173232220 [GRCh38]
Chr2:174096948 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1454C>T (p.Ala485Val) single nucleotide variant not provided [RCV002578320] Chr2:173258793 [GRCh38]
Chr2:174123521 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1629G>T (p.Val543=) single nucleotide variant not provided [RCV002579044] Chr2:173263822 [GRCh38]
Chr2:174128550 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.664A>G (p.Asn222Asp) single nucleotide variant Inborn genetic diseases [RCV002718558] Chr2:173198107 [GRCh38]
Chr2:174062835 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1284T>A (p.Pro428=) single nucleotide variant not provided [RCV002834722] Chr2:173239421 [GRCh38]
Chr2:174104149 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.752C>G (p.Pro251Arg) single nucleotide variant not provided [RCV002629590] Chr2:173209736 [GRCh38]
Chr2:174074464 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1739G>C (p.Arg580Pro) single nucleotide variant not provided [RCV002811815] Chr2:173266086 [GRCh38]
Chr2:174130814 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1068C>G (p.Asp356Glu) single nucleotide variant not provided [RCV002631468] Chr2:173232324 [GRCh38]
Chr2:174097052 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1924G>A (p.Gly642Arg) single nucleotide variant not provided [RCV002835163] Chr2:173266271 [GRCh38]
Chr2:174130999 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.682C>T (p.Pro228Ser) single nucleotide variant not provided [RCV002857665] Chr2:173203808 [GRCh38]
Chr2:174068536 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.893A>G (p.Glu298Gly) single nucleotide variant not provided [RCV002833436] Chr2:173217156 [GRCh38]
Chr2:174081884 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1277G>A (p.Gly426Asp) single nucleotide variant not provided [RCV002581339] Chr2:173239414 [GRCh38]
Chr2:174104142 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2314G>A (p.Glu772Lys) single nucleotide variant not provided [RCV002746528] Chr2:173266661 [GRCh38]
Chr2:174131389 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1703-4G>A single nucleotide variant not provided [RCV002601552] Chr2:173266046 [GRCh38]
Chr2:174130774 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1020G>A (p.Thr340=) single nucleotide variant not provided [RCV002599779] Chr2:173229721 [GRCh38]
Chr2:174094449 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2340A>G (p.Pro780=) single nucleotide variant not provided [RCV002578938] Chr2:173266687 [GRCh38]
Chr2:174131415 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1703-5C>T single nucleotide variant not provided [RCV002671013] Chr2:173266045 [GRCh38]
Chr2:174130773 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1214A>G (p.Glu405Gly) single nucleotide variant Inborn genetic diseases [RCV002599012]|not provided [RCV002588223] Chr2:173238383 [GRCh38]
Chr2:174103111 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1502T>C (p.Ile501Thr) single nucleotide variant not provided [RCV002671241] Chr2:173261088 [GRCh38]
Chr2:174125816 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1203+16A>C single nucleotide variant not provided [RCV003028579] Chr2:173232475 [GRCh38]
Chr2:174097203 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1702+7dup duplication not provided [RCV003029563] Chr2:173263900..173263901 [GRCh38]
Chr2:174128628..174128629 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2145C>T (p.Tyr715=) single nucleotide variant not provided [RCV002628788] Chr2:173266492 [GRCh38]
Chr2:174131220 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1204-15T>C single nucleotide variant not provided [RCV002601420] Chr2:173238358 [GRCh38]
Chr2:174103086 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1461T>C (p.Ile487=) single nucleotide variant not provided [RCV002806184] Chr2:173258800 [GRCh38]
Chr2:174123528 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2066A>T (p.Asn689Ile) single nucleotide variant not provided [RCV002631032] Chr2:173266413 [GRCh38]
Chr2:174131141 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1538C>T (p.Thr513Ile) single nucleotide variant not provided [RCV002676392] Chr2:173261124 [GRCh38]
Chr2:174125852 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2048G>A (p.Arg683His) single nucleotide variant not provided [RCV003068405] Chr2:173266395 [GRCh38]
Chr2:174131123 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1799C>T (p.Pro600Leu) single nucleotide variant not provided [RCV002605599] Chr2:173266146 [GRCh38]
Chr2:174130874 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.971A>C (p.Glu324Ala) single nucleotide variant not provided [RCV002657836] Chr2:173217234 [GRCh38]
Chr2:174081962 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1908G>A (p.Ser636=) single nucleotide variant not provided [RCV002608251] Chr2:173266255 [GRCh38]
Chr2:174130983 [GRCh37]
Chr2:2q31.1
likely benign|uncertain significance
NM_016653.3(MAP3K20):c.1552-15del deletion not provided [RCV003066271] Chr2:173263728 [GRCh38]
Chr2:174128456 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.2292C>T (p.Ser764=) single nucleotide variant not provided [RCV002658455] Chr2:173266639 [GRCh38]
Chr2:174131367 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.988-3C>T single nucleotide variant not provided [RCV003071644] Chr2:173229686 [GRCh38]
Chr2:174094414 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1768C>T (p.Arg590Cys) single nucleotide variant not provided [RCV002587221] Chr2:173266115 [GRCh38]
Chr2:174130843 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1063+19C>T single nucleotide variant not provided [RCV002587377] Chr2:173232241 [GRCh38]
Chr2:174096969 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.745-7T>C single nucleotide variant not provided [RCV002676829] Chr2:173209722 [GRCh38]
Chr2:174074450 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1740G>A (p.Arg580=) single nucleotide variant not provided [RCV002611535] Chr2:173266087 [GRCh38]
Chr2:174130815 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1952A>G (p.His651Arg) single nucleotide variant not provided [RCV003067369] Chr2:173266299 [GRCh38]
Chr2:174131027 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1026C>T (p.Asp342=) single nucleotide variant not provided [RCV003873834] Chr2:173229727 [GRCh38]
Chr2:174094455 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.987+4003G>A single nucleotide variant not provided [RCV003436250] Chr2:173221253 [GRCh38]
Chr2:174085981 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1702+16C>T single nucleotide variant not provided [RCV003828465] Chr2:173263911 [GRCh38]
Chr2:174128639 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1360-9T>A single nucleotide variant not provided [RCV003661805] Chr2:173258690 [GRCh38]
Chr2:174123418 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1404T>C (p.Ile468=) single nucleotide variant not provided [RCV003829926] Chr2:173258743 [GRCh38]
Chr2:174123471 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1632A>G (p.Lys544=) single nucleotide variant not provided [RCV003662284] Chr2:173263825 [GRCh38]
Chr2:174128553 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1296G>A (p.Glu432=) single nucleotide variant not provided [RCV003712724] Chr2:173239433 [GRCh38]
Chr2:174104161 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.744+11G>A single nucleotide variant not provided [RCV003664299] Chr2:173203881 [GRCh38]
Chr2:174068609 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.882A>G (p.Leu294=) single nucleotide variant not provided [RCV003697909] Chr2:173217145 [GRCh38]
Chr2:174081873 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2283C>T (p.Ser761=) single nucleotide variant not provided [RCV003665144] Chr2:173266630 [GRCh38]
Chr2:174131358 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.744+18T>C single nucleotide variant not provided [RCV003670218] Chr2:173203888 [GRCh38]
Chr2:174068616 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1089A>G (p.Val363=) single nucleotide variant not provided [RCV003813834] Chr2:173232345 [GRCh38]
Chr2:174097073 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.867A>T (p.Ala289=) single nucleotide variant not provided [RCV003855670] Chr2:173217130 [GRCh38]
Chr2:174081858 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.588C>T (p.Leu196=) single nucleotide variant not provided [RCV003850943] Chr2:173198031 [GRCh38]
Chr2:174062759 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1267-14G>A single nucleotide variant not provided [RCV003580798] Chr2:173239390 [GRCh38]
Chr2:174104118 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1821C>T (p.Gly607=) single nucleotide variant not provided [RCV003559809] Chr2:173266168 [GRCh38]
Chr2:174130896 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1560T>C (p.Val520=) single nucleotide variant not provided [RCV003668588] Chr2:173263753 [GRCh38]
Chr2:174128481 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1703-15C>A single nucleotide variant not provided [RCV003708218] Chr2:173266035 [GRCh38]
Chr2:174130763 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.852-20C>T single nucleotide variant not provided [RCV003823458] Chr2:173217095 [GRCh38]
Chr2:174081823 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1703-14C>A single nucleotide variant not provided [RCV003866298] Chr2:173266036 [GRCh38]
Chr2:174130764 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1360-15T>C single nucleotide variant not provided [RCV003857982] Chr2:173258684 [GRCh38]
Chr2:174123412 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.736G>A (p.Asp246Asn) single nucleotide variant not provided [RCV003677822] Chr2:173203862 [GRCh38]
Chr2:174068590 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.583-4C>A single nucleotide variant not provided [RCV003679587] Chr2:173198022 [GRCh38]
Chr2:174062750 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1005G>A (p.Glu335=) single nucleotide variant not provided [RCV003818233] Chr2:173229706 [GRCh38]
Chr2:174094434 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.600A>G (p.Leu200=) single nucleotide variant not provided [RCV003737599] Chr2:173198043 [GRCh38]
Chr2:174062771 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1849C>A (p.Arg617=) single nucleotide variant not provided [RCV003735649] Chr2:173266196 [GRCh38]
Chr2:174130924 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1218A>G (p.Lys406=) single nucleotide variant not provided [RCV003720034] Chr2:173238387 [GRCh38]
Chr2:174103115 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1703-9C>A single nucleotide variant not provided [RCV003868327] Chr2:173266041 [GRCh38]
Chr2:174130769 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.669+9A>G single nucleotide variant not provided [RCV003823545] Chr2:173198121 [GRCh38]
Chr2:174062849 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.583-11T>G single nucleotide variant not provided [RCV003823695] Chr2:173198015 [GRCh38]
Chr2:174062743 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1593G>A (p.Ser531=) single nucleotide variant not provided [RCV003848293] Chr2:173263786 [GRCh38]
Chr2:174128514 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.2065A>G (p.Asn689Asp) single nucleotide variant not provided [RCV003731976] Chr2:173266412 [GRCh38]
Chr2:174131140 [GRCh37]
Chr2:2q31.1
benign
NM_016653.3(MAP3K20):c.1148A>G (p.Glu383Gly) single nucleotide variant not provided [RCV003710753] Chr2:173232404 [GRCh38]
Chr2:174097132 [GRCh37]
Chr2:2q31.1
uncertain significance
NM_016653.3(MAP3K20):c.1545A>G (p.Thr515=) single nucleotide variant not provided [RCV003553888] Chr2:173261131 [GRCh38]
Chr2:174125859 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.918G>A (p.Gln306=) single nucleotide variant not provided [RCV003861677] Chr2:173217181 [GRCh38]
Chr2:174081909 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.987+4224GAT[6] microsatellite MAP3K20-related condition [RCV003907018] Chr2:173221473..173221474 [GRCh38]
Chr2:174086201..174086202 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.987+3977G>A single nucleotide variant MAP3K20-related condition [RCV003979655] Chr2:173221227 [GRCh38]
Chr2:174085955 [GRCh37]
Chr2:2q31.1
likely benign
NM_016653.3(MAP3K20):c.1770T>C (p.Arg590=) single nucleotide variant not provided [RCV003725672] Chr2:173266117 [GRCh38]
Chr2:174130845 [GRCh37]
Chr2:2q31.1
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:125
Count of miRNA genes:114
Interacting mature miRNAs:117
Transcripts:ENST00000419609, ENST00000422703, ENST00000423106
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH11697  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372174,098,660 - 174,098,781UniSTSGRCh37
Build 362173,806,906 - 173,807,027RGDNCBI36
Celera2167,712,087 - 167,712,208RGD
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2165,978,099 - 165,978,220UniSTS
GeneMap99-GB4 RH Map2566.26UniSTS
RH80553  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372174,091,625 - 174,091,853UniSTSGRCh37
Build 362173,799,871 - 173,800,099RGDNCBI36
Celera2167,705,052 - 167,705,280RGD
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2165,971,061 - 165,971,289UniSTS
GeneMap99-GB4 RH Map2575.96UniSTS
RH94286  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372174,133,414 - 174,133,544UniSTSGRCh37
Build 362173,841,660 - 173,841,790RGDNCBI36
Celera2167,746,821 - 167,746,951RGD
Cytogenetic Map2q31.1UniSTS
HuRef2166,012,833 - 166,012,963UniSTS
GeneMap99-GB4 RH Map2567.7UniSTS
RH102508  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372174,091,201 - 174,091,380UniSTSGRCh37
Build 362173,799,447 - 173,799,626RGDNCBI36
Celera2167,704,628 - 167,704,807RGD
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2165,970,637 - 165,970,816UniSTS
GeneMap99-GB4 RH Map2559.86UniSTS
A009I04  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372174,090,381 - 174,090,481UniSTSGRCh37
Build 362173,798,627 - 173,798,727RGDNCBI36
Celera2167,703,807 - 167,703,907RGD
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2165,969,816 - 165,969,916UniSTS
GeneMap99-GB4 RH Map2567.59UniSTS
NCBI RH Map21352.7UniSTS
RH69341  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372174,132,480 - 174,132,646UniSTSGRCh37
Build 362173,840,726 - 173,840,892RGDNCBI36
Celera2167,745,891 - 167,746,057RGD
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2166,011,903 - 166,012,069UniSTS
GeneMap99-GB4 RH Map2567.7UniSTS
NCBI RH Map21352.7UniSTS
G32560  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372174,090,381 - 174,090,481UniSTSGRCh37
Celera2167,703,807 - 167,703,907UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q24.2UniSTS
HuRef2165,969,816 - 165,969,916UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 12 1 1 11 1 2
Low 1195 1020 264 88 119 84 2242 1170 218 53 891 557 4 539 1424 1
Below cutoff 1178 1905 1404 496 1559 341 2079 985 3091 290 527 993 166 663 1363 1

Sequence


RefSeq Acc Id: ENST00000419609
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2173,166,446 - 173,207,612 (-)Ensembl
RefSeq Acc Id: ENST00000422703
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2173,166,730 - 173,271,620 (-)Ensembl
RefSeq Acc Id: ENST00000423106
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2173,197,712 - 173,282,036 (-)Ensembl
RefSeq Acc Id: NR_033882
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382173,197,712 - 173,282,036 (-)NCBI
GRCh372174,062,440 - 174,146,764 (-)RGD
Celera2167,675,853 - 167,760,178 (-)RGD
HuRef2165,941,854 - 166,026,211 (-)RGD
CHM1_12174,069,501 - 174,153,968 (-)NCBI
T2T-CHM13v2.02173,684,280 - 173,768,605 (-)NCBI
Sequence:
Promoters
RGD ID:15095507
Promoter ID:EPDNEWNC_H337
Type:initiation region
Name:MAP3K20-AS1_1
Description:MAP3K20 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27935]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382173,282,037 - 173,282,097EPDNEWNC

Additional Information

Database Acc Id Source(s)
COSMIC MAP3K20-AS1 COSMIC
Ensembl Genes ENSG00000238133 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000423106 ENTREZGENE
GTEx ENSG00000238133 GTEx
HGNC ID HGNC:27935 ENTREZGENE
Human Proteome Map MAP3K20-AS1 Human Proteome Map
NCBI Gene 339751 ENTREZGENE
RNAcentral URS000075CC9C RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-11-29 MAP3K20-AS1  MAP3K20 antisense RNA 1  MLK7-AS1  MLK7 antisense RNA 1  Symbol and/or name change 5135510 APPROVED
2012-08-21 MLK7-AS1  MLK7 antisense RNA 1  MLK7-AS1  MLK7 antisense RNA 1 (non-protein coding)  Symbol and/or name change 5135510 APPROVED