NDUFA12P1 (NADH:ubiquinone oxidoreductase subunit A12 pseudogene 1) - Rat Genome Database

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Gene: NDUFA12P1 (NADH:ubiquinone oxidoreductase subunit A12 pseudogene 1) Homo sapiens
Analyze
Symbol: NDUFA12P1
Name: NADH:ubiquinone oxidoreductase subunit A12 pseudogene 1
RGD ID: 4890231
HGNC Page HGNC:39419
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: NDUFA12  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813100,027,769 - 100,028,174 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13100,027,769 - 100,028,174 (-)EnsemblGRCh38hg38GRCh38
GRCh3713100,680,023 - 100,680,428 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map13q32.3NCBI
HuRef1381,273,347 - 81,273,752 (-)NCBIHuRef
CHM1_113100,649,880 - 100,650,285 (-)NCBICHM1_1
T2T-CHM13v2.01399,238,679 - 99,239,084 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:174
Count of miRNA genes:167
Interacting mature miRNAs:173
Transcripts:ENST00000455914
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 4 1 1 12 2
Below cutoff 22 17 10 4 32 2 25 14 128 6 177 15 2 4 15

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000455914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl13100,027,769 - 100,028,174 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC NDUFA12P1 COSMIC
Ensembl Genes ENSG00000225999 Ensembl, ENTREZGENE
GTEx ENSG00000225999 GTEx
HGNC ID HGNC:39419 ENTREZGENE
Human Proteome Map NDUFA12P1 Human Proteome Map
NCBI Gene 100527945 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 NDUFA12P1  NADH:ubiquinone oxidoreductase subunit A12 pseudogene 1    NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 pseudogene 1  Symbol and/or name change 5135510 APPROVED