AK4P2 (adenylate kinase 4 pseudogene 2) - Rat Genome Database

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Gene: AK4P2 (adenylate kinase 4 pseudogene 2) Homo sapiens
Analyze
Symbol: AK4P2
Name: adenylate kinase 4 pseudogene 2
RGD ID: 4144712
HGNC Page HGNC:39066
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: AK4  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38555,551,694 - 55,552,667 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl555,551,885 - 55,552,554 (-)EnsemblGRCh38hg38GRCh38
GRCh37554,847,522 - 54,848,495 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36554,883,470 - 54,896,615 (-)NCBINCBI36Build 36hg18NCBI36
Celera551,801,829 - 51,802,495 (-)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef551,821,051 - 51,821,717 (-)NCBIHuRef
CHM1_1554,851,582 - 54,852,248 (-)NCBICHM1_1
T2T-CHM13v2.0556,379,286 - 56,380,259 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:153
Count of miRNA genes:150
Interacting mature miRNAs:153
Transcripts:ENST00000504372
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 1 37 10 4 10 4 1 33 6 10 4
Below cutoff 111 218 115 45 196 35 295 111 339 13 266 118 10 79 212

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000504372
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl555,551,885 - 55,552,554 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AK4P2 COSMIC
Ensembl Genes ENSG00000249410 Ensembl
GTEx ENSG00000249410 GTEx
HGNC ID HGNC:39066 ENTREZGENE
Human Proteome Map AK4P2 Human Proteome Map
NCBI Gene 100132104 ENTREZGENE