MRPL35P4 (mitochondrial ribosomal protein L35 pseudogene 4) - Rat Genome Database

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Gene: MRPL35P4 (mitochondrial ribosomal protein L35 pseudogene 4) Homo sapiens
Analyze
Symbol: MRPL35P4
Name: mitochondrial ribosomal protein L35 pseudogene 4
RGD ID: 4144479
HGNC Page HGNC:29707
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: MRPL35  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X12,844,917 - 12,845,433 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX12,844,865 - 12,845,430 (-)EnsemblGRCh38hg38GRCh38
GRCh37X12,863,036 - 12,863,552 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X12,773,102 - 12,773,470 (-)NCBINCBI36Build 36hg18NCBI36
CeleraX16,977,187 - 16,977,555 (-)NCBICelera
Cytogenetic MapXp22.2NCBI
HuRefX10,629,768 - 10,630,136 (-)NCBIHuRef
CHM1_1X12,893,613 - 12,893,981 (-)NCBICHM1_1
T2T-CHM13v2.0X12,426,398 - 12,426,913 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:12706105  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:22
Count of miRNA genes:22
Interacting mature miRNAs:22
Transcripts:ENST00000453682
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 7 2 3 1 33 3
Below cutoff 59 71 35 4 81 1 116 35 103 9 104 83 3 33 76

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000453682
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX12,844,865 - 12,845,430 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MRPL35P4 COSMIC
Ensembl Genes ENSG00000230691 Ensembl, ENTREZGENE
GTEx ENSG00000230691 GTEx
HGNC ID HGNC:29707 ENTREZGENE
Human Proteome Map MRPL35P4 Human Proteome Map
NCBI Gene 359745 ENTREZGENE