LOC119872887 (disintegrin and metalloproteinase domain-containing protein 20-like) - Rat Genome Database

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Gene: LOC119872887 (disintegrin and metalloproteinase domain-containing protein 20-like) Canis lupus familiaris
Analyze
Symbol: LOC119872887
Name: disintegrin and metalloproteinase domain-containing protein 20-like
RGD ID: 40918612
Description: ENCODES a protein that exhibits metal ion binding (inferred); metalloendopeptidase activity (inferred); INVOLVED IN male gonad development (inferred); proteolysis (inferred); FOUND IN external side of plasma membrane (inferred); membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha843,804,408 - 43,807,504 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0844,344,624 - 44,347,718 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1843,971,105 - 43,974,192 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0844,044,508 - 44,047,595 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0844,404,965 - 44,408,060 (-)NCBIUU_Cfam_GSD_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038483622   ⟹   XP_038339550
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1843,971,105 - 43,974,192 (-)NCBI
RefSeq Acc Id: XM_038545091   ⟹   XP_038401019
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0844,404,965 - 44,408,060 (-)NCBI
RefSeq Acc Id: XM_038589895   ⟹   XP_038445823
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha843,804,408 - 43,807,504 (-)NCBI
RefSeq Acc Id: XM_038609196   ⟹   XP_038465124
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0844,044,508 - 44,047,595 (-)NCBI
RefSeq Acc Id: XM_038674023   ⟹   XP_038529951
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0844,344,624 - 44,347,718 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038339550   ⟸   XM_038483622
RefSeq Acc Id: XP_038465124   ⟸   XM_038609196
RefSeq Acc Id: XP_038529951   ⟸   XM_038674023
- UniProtKB: A0A8C0JXQ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038445823   ⟸   XM_038589895
- UniProtKB: A0A8P0NMC5 (UniProtKB/TrEMBL),   A0A8C0JXQ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038401019   ⟸   XM_038545091
- UniProtKB: A0A8C0JXQ7 (UniProtKB/TrEMBL),   A0A8P0NMC5 (UniProtKB/TrEMBL)
Protein Domains
Disintegrin   EGF-like   Peptidase M12B


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016658 UniProtKB/TrEMBL
  ENSCAFG00845007386 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000036152.4 UniProtKB/TrEMBL
  ENSCAFT00845013019.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.390.10 UniProtKB/TrEMBL
  4.10.70.10 UniProtKB/TrEMBL
InterPro ADAM_Cys-rich UniProtKB/TrEMBL
  Disintegrin_CS UniProtKB/TrEMBL
  Disintegrin_dom UniProtKB/TrEMBL
  Disintegrin_dom_sf UniProtKB/TrEMBL
  EGF-like_dom UniProtKB/TrEMBL
  MetalloPept_cat_dom_sf UniProtKB/TrEMBL
  Peptidase_M12B UniProtKB/TrEMBL
  Peptidase_M12B_N UniProtKB/TrEMBL
  Reprolysin_adamalysin UniProtKB/TrEMBL
NCBI Gene LOC119872887 ENTREZGENE
PANTHER ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN UniProtKB/TrEMBL
  PTHR11905:SF167 UniProtKB/TrEMBL
Pfam ADAM_CR UniProtKB/TrEMBL
  Disintegrin UniProtKB/TrEMBL
  Pep_M12B_propep UniProtKB/TrEMBL
  Reprolysin UniProtKB/TrEMBL
PROSITE ADAM_MEPRO UniProtKB/TrEMBL
  DISINTEGRIN_1 UniProtKB/TrEMBL
  DISINTEGRIN_2 UniProtKB/TrEMBL
  EGF_2 UniProtKB/TrEMBL
  EGF_3 UniProtKB/TrEMBL
SMART ACR UniProtKB/TrEMBL
  DISIN UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF57552 UniProtKB/TrEMBL
UniProt A0A8C0JXQ7 ENTREZGENE
  A0A8I3N849_CANLF UniProtKB/TrEMBL
  A0A8P0NMC5 ENTREZGENE, UniProtKB/TrEMBL