LOC134478826 (zinc finger protein 420) - Rat Genome Database

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Gene: LOC134478826 (zinc finger protein 420) Rattus norvegicus
Analyze
Symbol: LOC134478826
Name: zinc finger protein 420
RGD ID: 402130795
Description:
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,220,495 - 94,233,805 (+)NCBIGRCr8


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA)

References

Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_039093721   ⟹   XP_038949649
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,220,504 - 94,233,805 (+)NCBI
RefSeq Acc Id: XM_063277729   ⟹   XP_063133799
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,220,495 - 94,233,805 (+)NCBI
RefSeq Acc Id: XM_063277731   ⟹   XP_063133801
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,220,508 - 94,233,805 (+)NCBI
RefSeq Acc Id: XM_063277733   ⟹   XP_063133803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,220,497 - 94,233,805 (+)NCBI
RefSeq Acc Id: XM_063277735   ⟹   XP_063133805
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,220,497 - 94,233,805 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_063133799   ⟸   XM_063277729
- Peptide Label: isoform X1
- UniProtKB: D3Z901 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133803   ⟸   XM_063277733
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063133805   ⟸   XM_063277735
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038949649   ⟸   XM_039093721
- Peptide Label: isoform X1
- UniProtKB: D3Z901 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133801   ⟸   XM_063277731
- Peptide Label: isoform X1
- UniProtKB: D3Z901 (UniProtKB/TrEMBL)
Protein Domains
C2H2-type

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000037556 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000032973.6 UniProtKB/TrEMBL
  ENSRNOT00000118963.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene LOC134478826 ENTREZGENE
PANTHER ZINC FINGER PROTEIN 728-LIKE UniProtKB/TrEMBL
  ZINC FINGER PROTEIN ZIC AND GLI UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PhenoGen LOC134478826 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000037556 RatGTEx
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP beta-beta-alpha zinc fingers UniProtKB/TrEMBL
UniProt D3Z901 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-05 LOC134478826  zinc finger protein 420      Symbol and Name status set to provisional 70820 PROVISIONAL