ALG1L2 (ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2) - Rat Genome Database

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Gene: ALG1L2 (ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2) Homo sapiens
Analyze
Symbol: ALG1L2
Name: ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2
RGD ID: 3378598
HGNC Page HGNC:37258
Description: Predicted to enable mannosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be active in endoplasmic reticulum.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase like 2; ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2; asparagine-linked glycosylation 1-like 2; beta-1,4 mannosyltransferase-like; putative glycosyltransferase ALG1L2
RGD Orthologs
Bonobo
Alliance Orthologs
More Info more info ...
Related Pseudogenes: ALG1L15P  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
NCBI Annotation Information: Note: Genetic polymorphisms result in both protein coding and non-coding alleles of this gene.
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383130,081,831 - 130,098,390 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3130,081,831 - 130,113,227 (+)EnsemblGRCh38hg38GRCh38
GRCh373129,800,674 - 129,817,233 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363131,283,550 - 131,300,274 (+)NCBINCBI36Build 36hg18NCBI36
Celera3128,227,614 - 128,245,632 (+)NCBICelera
Cytogenetic Map3q22.1NCBI
HuRef3127,184,020 - 127,200,556 (+)NCBIHuRef
CHM1_13129,763,883 - 129,780,448 (+)NCBICHM1_1
T2T-CHM13v2.03132,825,683 - 132,842,233 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Autism  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:21873635   PMID:33008348   PMID:34373451  


Genomics

Comparative Map Data
ALG1L2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383130,081,831 - 130,098,390 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3130,081,831 - 130,113,227 (+)EnsemblGRCh38hg38GRCh38
GRCh373129,800,674 - 129,817,233 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363131,283,550 - 131,300,274 (+)NCBINCBI36Build 36hg18NCBI36
Celera3128,227,614 - 128,245,632 (+)NCBICelera
Cytogenetic Map3q22.1NCBI
HuRef3127,184,020 - 127,200,556 (+)NCBIHuRef
CHM1_13129,763,883 - 129,780,448 (+)NCBICHM1_1
T2T-CHM13v2.03132,825,683 - 132,842,233 (+)NCBIT2T-CHM13v2.0
ALG1L2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22127,980,241 - 128,049,144 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13127,984,968 - 128,054,143 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03127,173,756 - 127,178,840 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3

Variants

.
Variants in ALG1L2
21 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 3q13.11-29(chr3:103426882-198110178)x3 copy number gain See cases [RCV000134948] Chr3:103426882..198110178 [GRCh38]
Chr3:103145726..197837049 [GRCh37]
Chr3:104628416..199321446 [NCBI36]
Chr3:3q13.11-29		 pathogenic
GRCh38/hg38 3q22.1-24(chr3:129817243-143381624)x1 copy number loss See cases [RCV000136558] Chr3:129817243..143381624 [GRCh38]
Chr3:129536086..143100466 [GRCh37]
Chr3:131018776..144583156 [NCBI36]
Chr3:3q22.1-24		 pathogenic
GRCh38/hg38 3q22.1(chr3:129855684-130536179)x1 copy number loss See cases [RCV000137900] Chr3:129855684..130536179 [GRCh38]
Chr3:129574527..130255023 [GRCh37]
Chr3:131057217..131737713 [NCBI36]
Chr3:3q22.1		 uncertain significance
GRCh38/hg38 3q22.1-23(chr3:129817243-141425155)x1 copy number loss See cases [RCV000140995] Chr3:129817243..141425155 [GRCh38]
Chr3:129536086..141143997 [GRCh37]
Chr3:131018776..142626687 [NCBI36]
Chr3:3q22.1-23		 pathogenic
GRCh38/hg38 3q21.3-23(chr3:126106779-140918089)x3 copy number gain See cases [RCV000142010] Chr3:126106779..140918089 [GRCh38]
Chr3:125825622..140636931 [GRCh37]
Chr3:127308312..142119621 [NCBI36]
Chr3:3q21.3-23		 uncertain significance
GRCh38/hg38 3q11.1-24(chr3:93800620-145695381)x3 copy number gain See cases [RCV000142340] Chr3:93800620..145695381 [GRCh38]
Chr3:93519464..145413168 [GRCh37]
Chr3:95002154..146895858 [NCBI36]
Chr3:3q11.1-24		 pathogenic
GRCh38/hg38 3q21.3-22.1(chr3:127607945-133566661)x1 copy number loss See cases [RCV000142787] Chr3:127607945..133566661 [GRCh38]
Chr3:127326788..133285505 [GRCh37]
Chr3:128809478..134768195 [NCBI36]
Chr3:3q21.3-22.1		 likely pathogenic
Single allele deletion Autism [RCV000186554] Chr3:130044540..130087902 [GRCh38]
Chr3:129763384..129806746 [GRCh37]
Chr3:3q22.1		 uncertain significance
GRCh37/hg19 3q22.1(chr3:129570599-130273079)x1 copy number loss See cases [RCV000447758] Chr3:129570599..130273079 [GRCh37]
Chr3:3q22.1		 uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3q21.3-22.1(chr3:128660985-129811200)x1 copy number loss not provided [RCV000682304] Chr3:128660985..129811200 [GRCh37]
Chr3:3q21.3-22.1		 uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29		 pathogenic
GRCh37/hg19 3q22.1(chr3:129760622-129805882)x3 copy number gain not provided [RCV000742792] Chr3:129760622..129805882 [GRCh37]
Chr3:3q22.1		 benign
GRCh37/hg19 3q22.1(chr3:129769827-129814869)x1 copy number loss not provided [RCV000742793] Chr3:129769827..129814869 [GRCh37]
Chr3:3q22.1		 benign
NC_000003.11:g.(?_126707437)_(130720194_?)dup duplication Deafness-lymphedema-leukemia syndrome [RCV003113323]|not provided [RCV003107782] Chr3:126707437..130720194 [GRCh37]
Chr3:3q21.3-22.1		 uncertain significance|no classifications from unflagged records
Single allele deletion Deafness-lymphedema-leukemia syndrome [RCV001541925] Chr3:127966423..136853218 [GRCh37]
Chr3:3q21.3-22.3		 pathogenic
GRCh37/hg19 3q13.31-26.31(chr3:116620308-172042292)x3 copy number gain not provided [RCV002472621] Chr3:116620308..172042292 [GRCh37]
Chr3:3q13.31-26.31		 pathogenic
NC_000003.11:g.(?_120365818)_(133465047_?)del deletion Alkaptonuria [RCV002035459] Chr3:120365818..133465047 [GRCh37]
Chr3:3q13.33-22.1		 pathogenic
NM_001136152.1(ALG1L2):c.203C>T (p.Thr68Met) single nucleotide variant not specified [RCV004233666] Chr3:130092172 [GRCh38]
Chr3:129811015 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.110C>T (p.Thr37Met) single nucleotide variant not specified [RCV004089243] Chr3:130091350 [GRCh38]
Chr3:129810193 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.575T>C (p.Leu192Pro) single nucleotide variant not specified [RCV004156943] Chr3:130097210 [GRCh38]
Chr3:129816053 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.289C>T (p.Pro97Ser) single nucleotide variant not specified [RCV004117267] Chr3:130093136 [GRCh38]
Chr3:129811979 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.282G>C (p.Gln94His) single nucleotide variant not specified [RCV004229875] Chr3:130093129 [GRCh38]
Chr3:129811972 [GRCh37]
Chr3:3q22.1		 likely benign
NM_001136152.1(ALG1L2):c.250A>G (p.Thr84Ala) single nucleotide variant not specified [RCV004181010] Chr3:130092219 [GRCh38]
Chr3:129811062 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.493G>A (p.Asp165Asn) single nucleotide variant not specified [RCV004139202] Chr3:130096117 [GRCh38]
Chr3:129814960 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.322C>A (p.Pro108Thr) single nucleotide variant not specified [RCV004219670] Chr3:130094411 [GRCh38]
Chr3:129813254 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.335A>G (p.Tyr112Cys) single nucleotide variant not specified [RCV004222305] Chr3:130094424 [GRCh38]
Chr3:129813267 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.370C>T (p.His124Tyr) single nucleotide variant not specified [RCV004086895] Chr3:130094459 [GRCh38]
Chr3:129813302 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.206G>A (p.Arg69His) single nucleotide variant not specified [RCV004164526] Chr3:130092175 [GRCh38]
Chr3:129811018 [GRCh37]
Chr3:3q22.1		 likely benign
NM_001136152.1(ALG1L2):c.440A>G (p.Asp147Gly) single nucleotide variant not specified [RCV004205591] Chr3:130096064 [GRCh38]
Chr3:129814907 [GRCh37]
Chr3:3q22.1		 likely benign
NM_001136152.1(ALG1L2):c.64G>A (p.Ala22Thr) single nucleotide variant not specified [RCV004098696] Chr3:130091304 [GRCh38]
Chr3:129810147 [GRCh37]
Chr3:3q22.1		 likely benign
NM_001136152.1(ALG1L2):c.232G>A (p.Val78Ile) single nucleotide variant not specified [RCV004078089] Chr3:130092201 [GRCh38]
Chr3:129811044 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.205C>T (p.Arg69Cys) single nucleotide variant not specified [RCV004274569] Chr3:130092174 [GRCh38]
Chr3:129811017 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.629C>T (p.Ala210Val) single nucleotide variant not specified [RCV004252772] Chr3:130098236 [GRCh38]
Chr3:129817079 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.37G>A (p.Asp13Asn) single nucleotide variant not specified [RCV004264360] Chr3:130091277 [GRCh38]
Chr3:129810120 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.53T>C (p.Phe18Ser) single nucleotide variant not specified [RCV004306762] Chr3:130091293 [GRCh38]
Chr3:129810136 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.455C>T (p.Thr152Met) single nucleotide variant not specified [RCV004342390] Chr3:130096079 [GRCh38]
Chr3:129814922 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.413C>A (p.Pro138His) single nucleotide variant not specified [RCV004354949] Chr3:130094502 [GRCh38]
Chr3:129813345 [GRCh37]
Chr3:3q22.1		 uncertain significance
GRCh37/hg19 3q22.1(chr3:129582090-129914957)x3 copy number gain not provided [RCV003484143] Chr3:129582090..129914957 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.12T>C (p.Thr4=) single nucleotide variant not provided [RCV003427363] Chr3:130082028 [GRCh38]
Chr3:129800871 [GRCh37]
Chr3:3q22.1		 likely benign
NM_001136152.1(ALG1L2):c.128C>T (p.Ala43Val) single nucleotide variant not specified [RCV004405418] Chr3:130091368 [GRCh38]
Chr3:129810211 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.217C>G (p.Arg73Gly) single nucleotide variant not specified [RCV004405433] Chr3:130092186 [GRCh38]
Chr3:129811029 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.237C>A (p.Ser79Arg) single nucleotide variant not specified [RCV004405439] Chr3:130092206 [GRCh38]
Chr3:129811049 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.572G>A (p.Arg191His) single nucleotide variant not specified [RCV004405492] Chr3:130097207 [GRCh38]
Chr3:129816050 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.31G>A (p.Val11Ile) single nucleotide variant not specified [RCV004405455] Chr3:130091271 [GRCh38]
Chr3:129810114 [GRCh37]
Chr3:3q22.1		 uncertain significance
NM_001136152.1(ALG1L2):c.344G>A (p.Arg115His) single nucleotide variant not specified [RCV004405466] Chr3:130094433 [GRCh38]
Chr3:129813276 [GRCh37]
Chr3:3q22.1		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1517
Count of miRNA genes:616
Interacting mature miRNAs:704
Transcripts:ENST00000425059, ENST00000503500, ENST00000506370, ENST00000507643, ENST00000511726
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-52066  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372133,818,098 - 33,818,213UniSTSGRCh37
GRCh373129,789,922 - 129,790,037UniSTSGRCh37
Build 363131,272,612 - 131,272,727RGDNCBI36
Celera2119,001,728 - 19,001,843UniSTS
Celera3128,216,858 - 128,216,973RGD
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3q22.1UniSTS
HuRef2119,227,447 - 19,227,562UniSTS
HuRef3127,173,264 - 127,173,379UniSTS
TNG Radiation Hybrid Map2110191.0UniSTS
D21S1819  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372133,818,098 - 33,818,253UniSTSGRCh37
GRCh373129,789,882 - 129,790,037UniSTSGRCh37
Build 363131,272,572 - 131,272,727RGDNCBI36
Celera2119,001,728 - 19,001,883UniSTS
Celera3128,216,818 - 128,216,973RGD
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3q22.1UniSTS
HuRef2119,227,447 - 19,227,602UniSTS
HuRef3127,173,224 - 127,173,379UniSTS
Whitehead-YAC Contig Map21 UniSTS
ECD02309  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3749,721,774 - 9,722,608UniSTSGRCh37
GRCh372133,809,661 - 33,810,495UniSTSGRCh37
Build 3649,330,872 - 9,331,706RGDNCBI36
Celera410,204,691 - 10,205,525RGD
Celera2118,993,291 - 18,994,125UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map4p16.1UniSTS
HuRef3127,183,531 - 127,184,364UniSTS
HuRef2119,218,428 - 19,219,262UniSTS
HuRef49,055,918 - 9,056,752UniSTS
ECD18172  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373129,789,884 - 129,790,254UniSTSGRCh37
GRCh372133,817,881 - 33,818,251UniSTSGRCh37
Build 363131,272,574 - 131,272,944RGDNCBI36
Celera3128,216,820 - 128,217,190RGD
Celera2119,001,511 - 19,001,881UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map21q22.11UniSTS
HuRef3127,173,226 - 127,173,596UniSTS
HuRef2119,227,230 - 19,227,600UniSTS
REN80968  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372133,803,912 - 33,804,175UniSTSGRCh37
Build 362132,725,783 - 32,726,046RGDNCBI36
Celera2118,987,542 - 18,987,805RGD
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map11q13.2UniSTS
HuRef2119,212,755 - 19,213,018UniSTS
HuRef3127,189,735 - 127,189,998UniSTS
HuRef1163,877,566 - 63,877,829UniSTS
REN80986  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373129,801,726 - 129,801,981UniSTSGRCh37
GRCh372133,808,695 - 33,808,950UniSTSGRCh37
Build 363131,284,416 - 131,284,671RGDNCBI36
Celera3128,228,666 - 128,228,921RGD
Celera2118,992,325 - 18,992,580UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map21q22.11UniSTS
HuRef3127,185,072 - 127,185,327UniSTS
HuRef2119,217,462 - 19,217,717UniSTS
REN80998  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373129,798,890 - 129,799,129UniSTSGRCh37
GRCh372133,811,553 - 33,811,792UniSTSGRCh37
Build 363131,281,580 - 131,281,819RGDNCBI36
Celera3128,225,821 - 128,226,060RGD
Celera2118,995,183 - 18,995,422UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map21q22.11UniSTS
HuRef3127,182,224 - 127,182,463UniSTS
HuRef2119,220,320 - 19,220,559UniSTS
REN81031  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373129,789,858 - 129,790,119UniSTSGRCh37
GRCh372133,818,016 - 33,818,277UniSTSGRCh37
Build 363131,272,548 - 131,272,809RGDNCBI36
Celera3128,216,794 - 128,217,055RGD
Celera2119,001,646 - 19,001,907UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map21q22.11UniSTS
HuRef3127,173,200 - 127,173,461UniSTS
HuRef2119,227,365 - 19,227,626UniSTS
stSG606397  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372133,811,135 - 33,812,388UniSTSGRCh37
GRCh373129,798,296 - 129,799,561UniSTSGRCh37
Build 363131,280,986 - 131,282,251RGDNCBI36
Celera2118,994,765 - 18,996,018UniSTS
Celera3128,225,227 - 128,226,501RGD
Cytogenetic Map3q22.1UniSTS
HuRef2119,219,902 - 19,221,155UniSTS
HuRef3127,181,627 - 127,182,907UniSTS
a06503sbk  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map11p15.4UniSTS
GeneMap99-GB4 RH Map3573.02UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 47
Low 372 98 543 75 840 36 604 108 763 159 918 590 48 121 329 3
Below cutoff 2004 2567 1120 493 989 376 3431 1681 2799 248 478 990 120 1054 2164 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000425059   ⟹   ENSP00000479850
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3130,081,831 - 130,098,390 (+)Ensembl
RefSeq Acc Id: ENST00000507643
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3130,081,961 - 130,098,390 (+)Ensembl
RefSeq Acc Id: ENST00000511726
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3130,093,906 - 130,113,227 (+)Ensembl
RefSeq Acc Id: ENST00000698236   ⟹   ENSP00000513618
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3130,081,831 - 130,098,390 (+)Ensembl
RefSeq Acc Id: ENST00000698237   ⟹   ENSP00000513619
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3130,081,831 - 130,098,390 (+)Ensembl
RefSeq Acc Id: NM_001136152   ⟹   NP_001129624
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383130,081,831 - 130,098,390 (+)NCBI
GRCh373129,800,674 - 129,817,233 (+)RGD
Celera3128,227,614 - 128,245,632 (+)RGD
HuRef3127,184,020 - 127,200,556 (+)ENTREZGENE
CHM1_13129,763,883 - 129,780,448 (+)NCBI
T2T-CHM13v2.03132,825,683 - 132,842,233 (+)NCBI
Sequence:
RefSeq Acc Id: NR_178038
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03132,825,683 - 132,842,233 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001129624 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AFG72968 (Get FASTA)   NCBI Sequence Viewer  
  C9J202 (Get FASTA)   NCBI Sequence Viewer  
  EAW79228 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000479850
  ENSP00000479850.1
  ENSP00000513618.2
  ENSP00000513619.1
Reference Protein Sequences
RefSeq Acc Id: NP_001129624   ⟸   NM_001136152
- UniProtKB: C9J202 (UniProtKB/Swiss-Prot),   A0A8V8TLI2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000479850   ⟸   ENST00000425059
RefSeq Acc Id: ENSP00000513619   ⟸   ENST00000698237
RefSeq Acc Id: ENSP00000513618   ⟸   ENST00000698236
Protein Domains
Glycosyl transferase family

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-C9J202-F1-model_v2 AlphaFold C9J202 1-215 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:37258 AgrOrtholog
COSMIC ALG1L2 COSMIC
Ensembl Genes ENSG00000251287 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000425059 ENTREZGENE
  ENST00000425059.1 UniProtKB/Swiss-Prot
  ENST00000698236.2 UniProtKB/TrEMBL
  ENST00000698237.1 UniProtKB/TrEMBL
Gene3D-CATH Glycogen Phosphorylase B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000251287 GTEx
HGNC ID HGNC:37258 ENTREZGENE
Human Proteome Map ALG1L2 Human Proteome Map
InterPro ALG1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Glyco_trans_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:644974 UniProtKB/Swiss-Prot
NCBI Gene 644974 ENTREZGENE
PANTHER BETA1,4 MANNOSYLTRANSFERASE UniProtKB/TrEMBL
  GLYCOSYLTRANSFERASE ALG1L2-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13036 UniProtKB/Swiss-Prot
Pfam Glycos_transf_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA165696819 PharmGKB
Superfamily-SCOP UDP-Glycosyltransferase/glycogen phosphorylase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8V8TLI2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8V8TNA5_HUMAN UniProtKB/TrEMBL
  AG1L2_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  H9XFA2_HUMAN UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-01-22 ALG1L2  ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2    ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase like 2  Symbol and/or name change 5135510 APPROVED
2016-06-21 ALG1L2  ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase like 2    ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2  Symbol and/or name change 5135510 APPROVED
2013-02-27 ALG1L2  ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2    asparagine-linked glycosylation 1-like 2  Symbol and/or name change 5135510 APPROVED