Mir203 (microRNA 203) - Rat Genome Database

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Pathways
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Gene: Mir203 (microRNA 203) Rattus norvegicus
Analyze
Symbol: Mir203
Name: microRNA 203
RGD ID: 2325452
Description:
Type: ncrna
RefSeq Status: PROVISIONAL
Previously known as: Mir203a; rno-mir-203; rno-mir-203a
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86137,020,705 - 137,020,801 (+)NCBIGRCr8
mRatBN7.26131,199,556 - 131,199,652 (+)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx6131,372,554 - 131,372,650 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06131,669,520 - 131,669,616 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06131,029,069 - 131,029,165 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06136,704,961 - 136,705,057 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06145,714,633 - 145,714,729 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera6128,752,146 - 128,752,242 (+)NCBICelera
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. MicroRNA-31 activates the RAS pathway and functions as an oncogenic MicroRNA in human colorectal cancer by repressing RAS p21 GTPase activating protein 1 (RASA1). Sun D, etal., J Biol Chem. 2013 Mar 29;288(13):9508-18. doi: 10.1074/jbc.M112.367763. Epub 2013 Jan 15.
Additional References at PubMed
PMID:16381832   PMID:16766679   PMID:20403161   PMID:23951316   PMID:24451631   PMID:25259839   PMID:28100026   PMID:28347692   PMID:28501131   PMID:28586069   PMID:29248491   PMID:29328402  
PMID:30178828   PMID:30575929   PMID:31707396   PMID:31725080   PMID:31814541   PMID:32639875   PMID:32783282   PMID:32787903   PMID:33415607   PMID:34756996   PMID:35052415   PMID:35305977  
PMID:37945654   PMID:38095638  


Genomics

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:14512
Count of gene targets:7949
Count of transcripts:8612
Interacting mature miRNAs:rno-miR-203a-3p, rno-miR-203a-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
2312560Pur20Proteinuria QTL 202.10.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)6122549046137801795Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: NR_031918
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86137,020,705 - 137,020,801 (+)NCBI
mRatBN7.26131,199,556 - 131,199,652 (+)NCBI
Rnor_6.06136,704,961 - 136,705,057 (+)NCBI
Rnor_5.06145,714,633 - 145,714,729 (+)NCBI
Celera6128,752,146 - 128,752,242 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35801 BioCyc
miRBase MI0000945 ENTREZGENE
NCBI Gene 100314161 ENTREZGENE
PhenoGen Mir203 PhenoGen
RNAcentral URS00004DA9DB RNACentral
  URS000075BAF4 RNACentral
  URS000075CCD1 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-04-09 Mir203  microRNA 203  Mir203  microRNA mir-203  Name updated 61478 APPROVED
2010-06-02 Mir203  microRNA mir-203      Symbol and Name status set to provisional 70820 PROVISIONAL