Poteh (POTE ankyrin domain family member H) - Rat Genome Database

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Gene: Poteh (POTE ankyrin domain family member H) Rattus norvegicus
Analyze
Symbol: Poteh
Name: POTE ankyrin domain family member H
RGD ID: 2323175
Description: Orthologous to human POTEH (POTE ankyrin domain family member H); INTERACTS WITH bisphenol A; aflatoxin B1 (ortholog); amiodarone (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat domain-containing protein 26-like; coiled-coil domain-containing protein 144A-like; LOC100363368; mCG11429-like
RGD Orthologs
Human
Mouse
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81519,559,450 - 19,654,345 (+)NCBIGRCr8
mRatBN7.21517,131,582 - 17,219,924 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01518,919,299 - 19,008,178 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01522,885,738 - 22,973,003 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41519,121,888 - 19,160,715 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1517,086,946 - 17,173,612 (+)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Poteh
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81519,559,450 - 19,654,345 (+)NCBIGRCr8
mRatBN7.21517,131,582 - 17,219,924 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01518,919,299 - 19,008,178 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01522,885,738 - 22,973,003 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41519,121,888 - 19,160,715 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1517,086,946 - 17,173,612 (+)NCBICelera
Cytogenetic Map15p14NCBI
POTEH
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382215,690,026 - 15,721,631 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2215,690,026 - 15,721,631 (+)EnsemblGRCh38hg38GRCh38
GRCh372216,256,332 - 16,287,937 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362214,636,332 - 14,667,937 (-)NCBINCBI36Build 36hg18NCBI36
Build 341419,058,805 - 19,090,272NCBI
Cytogenetic Map22q11.1NCBI
HuRef2272,736 - 82,738 (-)NCBIHuRef
CHM1_12216,257,042 - 16,288,874 (-)NCBICHM1_1
T2T-CHM13v2.02216,263,953 - 16,295,528 (+)NCBIT2T-CHM13v2.0
Potegl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39223,094,769 - 23,157,141 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl223,097,488 - 23,157,141 (+)EnsemblGRCm39 Ensembl
GRCm38223,204,748 - 23,267,129 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl223,207,476 - 23,267,129 (+)EnsemblGRCm38mm10GRCm38
MGSCv37223,062,996 - 23,122,649 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36223,029,485 - 23,089,127 (+)NCBIMGSCv36mm8
Celera222,939,280 - 22,999,116 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map215.25NCBI

Variants

.
Variants in Poteh
601 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)colorectal tumor number (CMO:0001794)15226636822711984Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
5685002Bss103Bone structure and strength QTL 1032.8tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)151448116528469888Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat

Markers in Region
RH138186  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21517,131,344 - 17,131,590 (+)MAPPERmRatBN7.2
Rnor_6.01518,919,523 - 18,919,768NCBIRnor6.0
Rnor_5.01522,885,927 - 22,886,172UniSTSRnor5.0
RGSC_v3.41519,121,083 - 19,121,328UniSTSRGSC3.4
Celera1517,087,170 - 17,087,415UniSTS
RH 3.4 Map15144.9UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_006221898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006251787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001841482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001841483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001846229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001846230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005493886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_006251787   ⟹   XP_006251849
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,646,791 (+)NCBI
mRatBN7.21517,131,582 - 17,216,595 (+)NCBI
Rnor_6.01518,919,302 - 19,008,177 (+)NCBI
Rnor_5.01522,885,738 - 22,973,003 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770604   ⟹   XP_008768826
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,654,345 (+)NCBI
mRatBN7.21517,131,582 - 17,219,924 (+)NCBI
Rnor_6.01518,919,302 - 19,008,177 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008770605   ⟹   XP_008768827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,646,791 (+)NCBI
mRatBN7.21517,131,582 - 17,216,595 (+)NCBI
Rnor_6.01518,919,299 - 19,008,178 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039093754   ⟹   XP_038949682
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,646,791 (+)NCBI
mRatBN7.21517,131,582 - 17,216,595 (+)NCBI
RefSeq Acc Id: XM_063274848   ⟹   XP_063130918
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,562,393 - 19,646,791 (+)NCBI
RefSeq Acc Id: XM_063274849   ⟹   XP_063130919
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,562,381 - 19,646,791 (+)NCBI
RefSeq Acc Id: XM_063274850   ⟹   XP_063130920
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,583,088 - 19,646,791 (+)NCBI
RefSeq Acc Id: XR_001841483
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,646,791 (+)NCBI
mRatBN7.21517,131,582 - 17,216,595 (+)NCBI
Rnor_6.01518,919,303 - 19,003,707 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005493877
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,654,345 (+)NCBI
mRatBN7.21517,131,582 - 17,219,924 (+)NCBI
RefSeq Acc Id: XR_005493879
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,634,768 (+)NCBI
mRatBN7.21517,131,582 - 17,204,513 (+)NCBI
RefSeq Acc Id: XR_005493880
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,636,988 (+)NCBI
mRatBN7.21517,131,582 - 17,206,791 (+)NCBI
RefSeq Acc Id: XR_005493881
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,613,458 (+)NCBI
mRatBN7.21517,131,582 - 17,183,261 (+)NCBI
RefSeq Acc Id: XR_005493882
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,630,644 (+)NCBI
mRatBN7.21517,131,582 - 17,200,447 (+)NCBI
RefSeq Acc Id: XR_005493883
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,613,458 (+)NCBI
mRatBN7.21517,131,582 - 17,183,261 (+)NCBI
RefSeq Acc Id: XR_005493884
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,630,644 (+)NCBI
mRatBN7.21517,131,582 - 17,200,447 (+)NCBI
RefSeq Acc Id: XR_005493885
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,613,458 (+)NCBI
mRatBN7.21517,131,582 - 17,183,261 (+)NCBI
RefSeq Acc Id: XR_005493886
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,630,644 (+)NCBI
mRatBN7.21517,131,582 - 17,200,447 (+)NCBI
RefSeq Acc Id: XR_010058105
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,654,345 (+)NCBI
RefSeq Acc Id: XR_010058106
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,654,345 (+)NCBI
RefSeq Acc Id: XR_010058107
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,654,345 (+)NCBI
RefSeq Acc Id: XR_010058108
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81519,559,450 - 19,654,345 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_006251849   ⟸   XM_006251787
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008768827   ⟸   XM_008770605
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_008768826   ⟸   XM_008770604
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_038949682   ⟸   XM_039093754
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063130919   ⟸   XM_063274849
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063130918   ⟸   XM_063274848
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063130920   ⟸   XM_063274850
- Peptide Label: isoform X6


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2323175 AgrOrtholog
BioCyc Gene G2FUF-14276 BioCyc
NCBI Gene 100363368 ENTREZGENE
PhenoGen Poteh PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-23 Poteh  POTE ankyrin domain family member H  LOC100363368  mCG11429-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-06 LOC100363368  mCG11429-like      Symbol and Name status set to provisional 70820 PROVISIONAL