Mageb10-ps (MAGE family member B10, pseudogene) - Rat Genome Database

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Gene: Mageb10-ps (MAGE family member B10, pseudogene) Mus musculus
Analyze
No known orthologs.
Symbol: Mageb10-ps
Name: MAGE family member B10, pseudogene
RGD ID: 2312030
MGI Page MGI
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: EG236427; Gm4901; Mageb1; Mageb10; melanoma antigen, family B, 10, pseudogene; mMage-b10
RGD Orthologs
Alliance Genes
More Info homologs ...
Related Functional Gene: Mageb4  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X85,343,372 - 85,348,699 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX85,343,528 - 85,344,934 (-)EnsemblGRCm39 Ensembl
GRCm38X86,299,766 - 86,305,093 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX86,299,922 - 86,301,328 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X83,545,205 - 83,550,792 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X82,552,586 - 82,558,173 (-)NCBIMGSCv36mm8
Cytogenetic MapXC1NCBI
cM MapX39.75NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11454705   PMID:32692974  


Genomics

Variants

.
Variants in Mageb10-ps
113 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:235
Count of miRNA genes:210
Interacting mature miRNAs:218
Transcripts:ENSMUST00000119697
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
25314316Mlh1fc3_mMLH1 foci count 3 (mouse)X6134360689843606Mouse
25314318Sccor2_msynaptonemal complex length to mean MLH1 count ratio 2 (mouse)X7054360696543606Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
12879918Shm4_msperm head morphology 4 (mouse)X72072050102062720Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
1302054Gct4_mgranulosa cell tumorigenesis 4 (mouse)Not determinedX76124336102062720Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000119697
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX85,343,528 - 85,344,934 (-)Ensembl
GRCm38.p6 EnsemblX86,299,922 - 86,301,328 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000082033 Ensembl
MGD MGI:2148174 ENTREZGENE
NCBI Gene 236427 ENTREZGENE
PhenoGen Mageb10-ps PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-09-01 Mageb10-ps  MAGE family member B10, pseudogene  Mageb10-ps  melanoma antigen, family B, 10, pseudogene  Symbol and/or name change 5135510 APPROVED