RPL32P26 (ribosomal protein L32 pseudogene 26) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: RPL32P26 (ribosomal protein L32 pseudogene 26) Homo sapiens
Analyze
Symbol: RPL32P26
Name: ribosomal protein L32 pseudogene 26
RGD ID: 2304649
HGNC Page HGNC:36027
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: RPL32_17_1245
Related Functional Gene: RPL32  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381262,658,797 - 62,659,271 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1262,658,823 - 62,659,225 (+)EnsemblGRCh38hg38GRCh38
GRCh371263,052,577 - 63,053,051 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361263,052,603 - 63,053,005 (+)NCBINCBI36Build 36hg18NCBI36
Celera1262,721,094 - 62,721,496 (+)NCBICelera
Cytogenetic Map12q14.1NCBI
HuRef1260,102,613 - 60,103,015 (+)NCBIHuRef
CHM1_11263,020,404 - 63,020,806 (+)NCBICHM1_1
T2T-CHM13v2.01262,637,575 - 62,638,055 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:19123937  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:68
Count of miRNA genes:68
Interacting mature miRNAs:68
Transcripts:ENST00000480482
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 4
Low 26 8 39 13 36 6 25 1 86 23 64 42 8 6 7 1
Below cutoff 266 368 425 143 201 63 593 208 853 104 330 373 82 181 334

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000480482
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1262,658,823 - 62,659,225 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RPL32P26 COSMIC
Ensembl Genes ENSG00000241941 Ensembl, ENTREZGENE
GTEx ENSG00000241941 GTEx
HGNC ID HGNC:36027 ENTREZGENE
Human Proteome Map RPL32P26 Human Proteome Map
NCBI Gene 100271491 ENTREZGENE