Ccnq-ps2 (cyclin Q, pseudogene 2) - Rat Genome Database

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Gene: Ccnq-ps2 (cyclin Q, pseudogene 2) Mus musculus
Analyze
Symbol: Ccnq-ps2
Name: cyclin Q, pseudogene 2
RGD ID: 2303940
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: VALIDATED
Previously known as: Gm9731
Related Functional Gene: Ccnq  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39827,786,073 - 27,787,228 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl827,786,083 - 27,786,829 (+)EnsemblGRCm39 Ensembl
GRCm38827,296,045 - 27,297,200 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl827,296,055 - 27,296,801 (+)EnsemblGRCm38mm10GRCm38
MGSCv37828,406,517 - 28,407,672 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36828,406,517 - 28,407,672 (+)NCBIMGSCv36mm8
Celera828,786,385 - 28,787,540 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map815.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Ccnq-ps2
35 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11533914Mts5_mmammary tumor susceptibility 5 (mouse)8130447432Mouse
4140978Nilac5_mnicotine induced locomotor activity 5 (mouse)Not determined8131773288Mouse
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8495000035067154Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8721249935110107Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8798418941984342Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8810320142103372Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8810320142103372Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8810320142103372Mouse
11532713Sluc42_msusceptibility to lung cancer 42 (mouse)81344721035321225Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
4142199Poats1_mpost-ovarectomy adrenal tumor susceptibility 1 (mouse)Not determined1708262628849467Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse

Markers in Region
RH142728  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37828,407,293 - 28,407,525UniSTSGRCm37
MGSCv371178,564,155 - 78,564,395UniSTSGRCm37
Celera1188,383,272 - 88,383,512UniSTS
Celera839,737,212 - 39,737,443UniSTS
Celera828,787,161 - 28,787,393UniSTS
Celera839,747,767 - 39,747,999UniSTS
Celera839,726,657 - 39,726,889UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000209480
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl827,786,083 - 27,786,829 (+)Ensembl
GRCm38.p6 Ensembl827,296,055 - 27,296,801 (+)Ensembl
RefSeq Acc Id: NR_003107
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39827,786,073 - 27,787,228 (+)NCBI
GRCm38827,296,045 - 27,297,200 (+)ENTREZGENE
MGSCv37828,406,517 - 28,407,672 (+)RGD
Celera828,786,385 - 28,787,540 (+)RGD
cM Map8 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000110154 Ensembl
MGD MGI:3780135 ENTREZGENE
NCBI Gene 732482 ENTREZGENE
PhenoGen Ccnq-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-03-21 Ccnq-ps2  cyclin Q, pseudogene 2  Gm9731  predicted gene 9731  Symbol and/or name updated 27372883 PROVISIONAL