CRACD (capping protein inhibiting regulator of actin dynamics) - Rat Genome Database

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Gene: CRACD (capping protein inhibiting regulator of actin dynamics) Homo sapiens
Analyze
Symbol: CRACD
Name: capping protein inhibiting regulator of actin dynamics
RGD ID: 2303430
HGNC Page HGNC:29219
Description: Involved in negative regulation of barbed-end actin filament capping. Predicted to be located in cytosol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cancer-related regulator of actin dynamics; capping protein-inhibiting regulator of actin dynamics; CRAD; DKFZp564H1363; hypothetical protein LOC57482; KIAA1211; uncharacterized protein KIAA1211
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38456,049,098 - 56,330,609 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl456,049,098 - 56,330,609 (+)EnsemblGRCh38hg38GRCh38
GRCh37456,915,264 - 57,196,775 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36456,731,118 - 56,891,647 (+)NCBINCBI36Build 36hg18NCBI36
Celera454,542,821 - 54,703,255 (+)NCBICelera
Cytogenetic Map4q12NCBI
HuRef452,990,321 - 53,150,672 (+)NCBIHuRef
CHM1_1457,071,533 - 57,232,004 (+)NCBICHM1_1
T2T-CHM13v2.0459,537,287 - 59,818,577 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10574462   PMID:11230166   PMID:12477932   PMID:14702039   PMID:21873635   PMID:23314748   PMID:25609649   PMID:25921289   PMID:26186194   PMID:26496610   PMID:28514442   PMID:29298432  
PMID:29507755   PMID:29568061   PMID:29859926   PMID:30258100   PMID:30361697   PMID:30652415   PMID:30833792   PMID:30890647   PMID:31240132   PMID:31527615   PMID:31699089   PMID:32513696  
PMID:32694731   PMID:33006362   PMID:33916271   PMID:33961781   PMID:34079125   PMID:34349018   PMID:35013218   PMID:35172140   PMID:35271311   PMID:36217030   PMID:36634849   PMID:37827155  


Genomics

Comparative Map Data
CRACD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38456,049,098 - 56,330,609 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl456,049,098 - 56,330,609 (+)EnsemblGRCh38hg38GRCh38
GRCh37456,915,264 - 57,196,775 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36456,731,118 - 56,891,647 (+)NCBINCBI36Build 36hg18NCBI36
Celera454,542,821 - 54,703,255 (+)NCBICelera
Cytogenetic Map4q12NCBI
HuRef452,990,321 - 53,150,672 (+)NCBIHuRef
CHM1_1457,071,533 - 57,232,004 (+)NCBICHM1_1
T2T-CHM13v2.0459,537,287 - 59,818,577 (+)NCBIT2T-CHM13v2.0
Cracd
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39576,803,225 - 77,021,393 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl576,804,359 - 77,021,392 (+)EnsemblGRCm39 Ensembl
GRCm38576,657,629 - 76,873,554 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl576,656,512 - 76,873,554 (+)EnsemblGRCm38mm10GRCm38
MGSCv37577,269,624 - 77,302,579 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36577,915,374 - 77,948,329 (+)NCBIMGSCv36mm8
Celera574,119,956 - 74,149,740 (+)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map541.34NCBI
Cracd
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81431,638,328 - 31,874,391 (-)NCBIGRCr8
mRatBN7.21431,284,066 - 31,520,103 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1431,284,184 - 31,522,431 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01433,649,989 - 33,783,794 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1433,649,637 - 33,677,031 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01433,440,443 - 33,572,091 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41433,579,288 - 33,607,176 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11433,580,497 - 33,603,246 (-)NCBI
Celera1430,598,428 - 30,835,727 (-)NCBICelera
Cytogenetic Map14p11NCBI
Cracd
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544714,650,035 - 14,672,593 (-)NCBIChiLan1.0ChiLan1.0
CRACD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2373,455,101 - 73,736,550 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1473,660,618 - 73,942,052 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0467,598,880 - 67,880,269 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1474,167,488 - 74,317,354 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl474,167,488 - 74,199,802 (-)Ensemblpanpan1.1panPan2
CRACD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha1348,186,323 - 48,464,898 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01348,908,991 - 49,188,758 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1349,053,638 - 49,185,780 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11348,582,034 - 48,860,708 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01348,274,278 - 48,389,682 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01349,055,345 - 49,335,630 (+)NCBIUU_Cfam_GSD_1.0
Cracd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528527,740,917 - 27,989,201 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493648218,309,078 - 18,557,335 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CRACD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl855,537,546 - 55,600,939 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1855,336,363 - 55,600,931 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2857,919,085 - 57,976,199 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CRACD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1712,293,366 - 12,570,793 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl712,296,214 - 12,325,965 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606612,963,771 - 13,241,119 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cracd
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476113,065,318 - 13,367,504 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CRACD
26 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 4p13-q13.1(chr4:44356201-62245882)x3 copy number gain See cases [RCV000050683] Chr4:44356201..62245882 [GRCh38]
Chr4:44358218..63111600 [GRCh37]
Chr4:44052975..62794195 [NCBI36]
Chr4:4p13-q13.1
pathogenic
GRCh38/hg38 4q12(chr4:56301201-56829410)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051598]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051598]|See cases [RCV000051598] Chr4:56301201..56829410 [GRCh38]
Chr4:57167367..57695576 [GRCh37]
Chr4:56862124..57390333 [NCBI36]
Chr4:4q12
uncertain significance
GRCh38/hg38 4q12-13.2(chr4:51831622-66991489)x3 copy number gain See cases [RCV000051771] Chr4:51831622..66991489 [GRCh38]
Chr4:52697788..67857207 [GRCh37]
Chr4:52392545..67539802 [NCBI36]
Chr4:4q12-13.2
pathogenic
GRCh38/hg38 4q12-22.3(chr4:51831622-97505618)x3 copy number gain See cases [RCV000051772] Chr4:51831622..97505618 [GRCh38]
Chr4:52697788..98426769 [GRCh37]
Chr4:52392545..98645792 [NCBI36]
Chr4:4q12-22.3
pathogenic
GRCh38/hg38 4q12-13.1(chr4:51899860-59984479)x3 copy number gain See cases [RCV000051773] Chr4:51899860..59984479 [GRCh38]
Chr4:52766026..60850197 [GRCh37]
Chr4:52460783..60532792 [NCBI36]
Chr4:4q12-13.1
pathogenic
GRCh38/hg38 4q12-13.1(chr4:52639018-59984479)x1 copy number loss See cases [RCV000053265] Chr4:52639018..59984479 [GRCh38]
Chr4:53505185..60850197 [GRCh37]
Chr4:53199942..60532792 [NCBI36]
Chr4:4q12-13.1
pathogenic
GRCh38/hg38 4q12-13.1(chr4:54198601-62270115)x1 copy number loss See cases [RCV000053266] Chr4:54198601..62270115 [GRCh38]
Chr4:55064768..63135833 [GRCh37]
Chr4:54759525..62818428 [NCBI36]
Chr4:4q12-13.1
pathogenic
NM_020722.1(KIAA1211):c.66G>C (p.Gln22His) single nucleotide variant Malignant melanoma [RCV000066463] Chr4:56298295 [GRCh38]
Chr4:57164461 [GRCh37]
Chr4:56859218 [NCBI36]
Chr4:4q12
not provided
NM_020722.1(KIAA1211):c.2115C>T (p.Ser705=) single nucleotide variant Malignant melanoma [RCV000066464] Chr4:56315617 [GRCh38]
Chr4:57181783 [GRCh37]
Chr4:56876540 [NCBI36]
Chr4:4q12
not provided
NM_020722.1(KIAA1211):c.2187C>T (p.Ser729=) single nucleotide variant Malignant melanoma [RCV000066465] Chr4:56315689 [GRCh38]
Chr4:57181855 [GRCh37]
Chr4:56876612 [NCBI36]
Chr4:4q12
not provided
GRCh38/hg38 4q12(chr4:55831692-56248102)x3 copy number gain See cases [RCV000135499] Chr4:55831692..56248102 [GRCh38]
Chr4:56697858..57114268 [GRCh37]
Chr4:56392615..56809025 [NCBI36]
Chr4:4q12
uncertain significance
GRCh38/hg38 4q12(chr4:56248102-57218522)x4 copy number gain See cases [RCV000137649] Chr4:56248102..57218522 [GRCh38]
Chr4:57114268..58084688 [GRCh37]
Chr4:56809025..57779445 [NCBI36]
Chr4:4q12
uncertain significance
NC_000004.12:g.56120879G>C single nucleotide variant Lung cancer [RCV000094906] Chr4:56120879 [GRCh38]
Chr4:56987045 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:12440-190904441)x3 copy number gain See cases [RCV000446653] Chr4:12440..190904441 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4q12(chr4:56946533-57046730)x1 copy number loss See cases [RCV000447177] Chr4:56946533..57046730 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473) copy number gain See cases [RCV000510453] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q13.1(chr4:68345-66440622)x3 copy number gain See cases [RCV000511193] Chr4:68345..66440622 [GRCh37]
Chr4:4p16.3-q13.1
pathogenic
NM_001393381.1(CRACD):c.514A>G (p.Lys172Glu) single nucleotide variant not specified [RCV004308105] Chr4:56313356 [GRCh38]
Chr4:57179522 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.553C>G (p.Gln185Glu) single nucleotide variant not specified [RCV004311360] Chr4:56314055 [GRCh38]
Chr4:57180221 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2250G>T (p.Met750Ile) single nucleotide variant not specified [RCV004305745] Chr4:56315752 [GRCh38]
Chr4:57181918 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.7A>G (p.Thr3Ala) single nucleotide variant not specified [RCV004329401] Chr4:56298236 [GRCh38]
Chr4:57164402 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473)x3 copy number gain See cases [RCV000512241] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4q12(chr4:57036491-57206774)x1 copy number loss not provided [RCV000682405] Chr4:57036491..57206774 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190915650)x3 copy number gain not provided [RCV000743155] Chr4:49450..190915650 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4q12(chr4:56945325-57149650)x1 copy number loss not provided [RCV000743589] Chr4:56945325..57149650 [GRCh37]
Chr4:4q12
benign
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190963766)x3 copy number gain not provided [RCV000743156] Chr4:49450..190963766 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:11525-191028879)x3 copy number gain not provided [RCV000743147] Chr4:11525..191028879 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
NM_001393381.1(CRACD):c.2461G>C (p.Asp821His) single nucleotide variant not specified [RCV004314591] Chr4:56315963 [GRCh38]
Chr4:57182129 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q12(chr4:57067953-57957651)x3 copy number gain not provided [RCV001005548] Chr4:57067953..57957651 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q11-12(chr4:52685980-59272025)x3 copy number gain not provided [RCV002473779] Chr4:52685980..59272025 [GRCh37]
Chr4:4q11-12
uncertain significance
GRCh37/hg19 4q12(chr4:56859976-57079261)x3 copy number gain not provided [RCV001005546] Chr4:56859976..57079261 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q12(chr4:56942915-57151080)x1 copy number loss not provided [RCV001005547] Chr4:56942915..57151080 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q12(chr4:56852775-57079261)x3 copy number gain not provided [RCV001005545] Chr4:56852775..57079261 [GRCh37]
Chr4:4q12
uncertain significance
GRCh38/hg38 4q12-21.1(chr4:51891814-76009719)x1 copy number loss Piebaldism [RCV001420508] Chr4:51891814..76009719 [GRCh38]
Chr4:4q12-21.1
pathogenic
GRCh37/hg19 4q12(chr4:56946533-57046730) copy number loss not specified [RCV002053421] Chr4:56946533..57046730 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q12-31.21(chr4:52866944-143582507)x3 copy number gain not provided [RCV001827738] Chr4:52866944..143582507 [GRCh37]
Chr4:4q12-31.21
pathogenic
GRCh37/hg19 4q11-12(chr4:52685685-58104722)x1 copy number loss not provided [RCV001829079] Chr4:52685685..58104722 [GRCh37]
Chr4:4q11-12
pathogenic
NC_000004.11:g.(?_55124936)_(57798318_?)dup duplication TMEM165-congenital disorder of glycosylation [RCV003120758]|not provided [RCV001944395] Chr4:55124936..57798318 [GRCh37]
Chr4:4q12
uncertain significance|no classifications from unflagged records
NC_000004.11:g.(?_55124936)_(57368027_?)del deletion TMEM165-congenital disorder of glycosylation [RCV003119917]|not provided [RCV003119918] Chr4:55124936..57368027 [GRCh37]
Chr4:4q12
pathogenic|uncertain significance|no classifications from unflagged records
NM_001393381.1(CRACD):c.2947C>A (p.Pro983Thr) single nucleotide variant not specified [RCV004321628] Chr4:56316449 [GRCh38]
Chr4:57182615 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1816C>G (p.Pro606Ala) single nucleotide variant not specified [RCV004287209] Chr4:56315318 [GRCh38]
Chr4:57181484 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.848C>T (p.Ala283Val) single nucleotide variant not specified [RCV004279444] Chr4:56314350 [GRCh38]
Chr4:57180516 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2891C>T (p.Ala964Val) single nucleotide variant not specified [RCV004262175] Chr4:56316393 [GRCh38]
Chr4:57182559 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2837C>T (p.Pro946Leu) single nucleotide variant not specified [RCV004252975] Chr4:56316339 [GRCh38]
Chr4:57182505 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.971A>G (p.Gln324Arg) single nucleotide variant not specified [RCV004254006] Chr4:56314473 [GRCh38]
Chr4:57180639 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1025A>G (p.Glu342Gly) single nucleotide variant not specified [RCV004257422] Chr4:56314527 [GRCh38]
Chr4:57180693 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2105G>A (p.Arg702Gln) single nucleotide variant not specified [RCV004259970] Chr4:56315607 [GRCh38]
Chr4:57181773 [GRCh37]
Chr4:4q12
uncertain significance
GRCh38/hg38 4p16.3-q12(chr4:85624-57073230)x3 copy number gain Neurodevelopmental disorder [RCV003327613] Chr4:85624..57073230 [GRCh38]
Chr4:4p16.3-q12
pathogenic
NM_001393381.1(CRACD):c.673G>C (p.Glu225Gln) single nucleotide variant not specified [RCV004340161] Chr4:56314175 [GRCh38]
Chr4:57180341 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.929A>C (p.Glu310Ala) single nucleotide variant not specified [RCV004365472] Chr4:56314431 [GRCh38]
Chr4:57180597 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3352C>A (p.Gln1118Lys) single nucleotide variant not specified [RCV004352890] Chr4:56323541 [GRCh38]
Chr4:57189707 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.863G>C (p.Arg288Pro) single nucleotide variant not specified [RCV004352475] Chr4:56314365 [GRCh38]
Chr4:57180531 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4q11-13.1(chr4:52685685-61903883)x1 copy number loss not provided [RCV003485416] Chr4:52685685..61903883 [GRCh37]
Chr4:4q11-13.1
pathogenic
NM_001393381.1(CRACD):c.1202T>C (p.Leu401Pro) single nucleotide variant not specified [RCV004374859] Chr4:56314704 [GRCh38]
Chr4:57180870 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2680G>C (p.Glu894Gln) single nucleotide variant not specified [RCV004374883] Chr4:56316182 [GRCh38]
Chr4:57182348 [GRCh37]
Chr4:4q12
uncertain significance
GRCh37/hg19 4p12-q35.2(chr4:45455621-191003541)x3 copy number gain not provided [RCV003885507] Chr4:45455621..191003541 [GRCh37]
Chr4:4p12-q35.2
pathogenic
NM_001393381.1(CRACD):c.2852C>T (p.Ala951Val) single nucleotide variant not specified [RCV004366994] Chr4:56316354 [GRCh38]
Chr4:57182520 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2870T>A (p.Leu957Gln) single nucleotide variant not specified [RCV004366995] Chr4:56316372 [GRCh38]
Chr4:57182538 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3569C>T (p.Ala1190Val) single nucleotide variant not specified [RCV004367008] Chr4:56327671 [GRCh38]
Chr4:57193837 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.806T>G (p.Leu269Arg) single nucleotide variant not specified [RCV004367018] Chr4:56314308 [GRCh38]
Chr4:57180474 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.811G>C (p.Glu271Gln) single nucleotide variant not specified [RCV004367019] Chr4:56314313 [GRCh38]
Chr4:57180479 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.10C>G (p.Arg4Gly) single nucleotide variant not specified [RCV004374855] Chr4:56298239 [GRCh38]
Chr4:57164405 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.110A>G (p.Lys37Arg) single nucleotide variant not specified [RCV004374856] Chr4:56298339 [GRCh38]
Chr4:57164505 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1130C>T (p.Ala377Val) single nucleotide variant not specified [RCV004374857] Chr4:56314632 [GRCh38]
Chr4:57180798 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.11G>A (p.Arg4Gln) single nucleotide variant not specified [RCV004374858] Chr4:56298240 [GRCh38]
Chr4:57164406 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1304G>C (p.Arg435Pro) single nucleotide variant not specified [RCV004374862] Chr4:56314806 [GRCh38]
Chr4:57180972 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.155G>A (p.Arg52Gln) single nucleotide variant not specified [RCV004374864] Chr4:56307569 [GRCh38]
Chr4:57173735 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1577A>T (p.Glu526Val) single nucleotide variant not specified [RCV004374865] Chr4:56315079 [GRCh38]
Chr4:57181245 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1807C>T (p.Leu603Phe) single nucleotide variant not specified [RCV004374870] Chr4:56315309 [GRCh38]
Chr4:57181475 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1948G>A (p.Gly650Arg) single nucleotide variant not specified [RCV004374873] Chr4:56315450 [GRCh38]
Chr4:57181616 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1961C>G (p.Pro654Arg) single nucleotide variant not specified [RCV004374874] Chr4:56315463 [GRCh38]
Chr4:57181629 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2081G>A (p.Gly694Asp) single nucleotide variant not specified [RCV004374877] Chr4:56315583 [GRCh38]
Chr4:57181749 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2293G>A (p.Gly765Ser) single nucleotide variant not specified [RCV004374878] Chr4:56315795 [GRCh38]
Chr4:57181961 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2648C>A (p.Pro883Gln) single nucleotide variant not specified [RCV004374881] Chr4:56316150 [GRCh38]
Chr4:57182316 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2668C>G (p.Arg890Gly) single nucleotide variant not specified [RCV004374882] Chr4:56316170 [GRCh38]
Chr4:57182336 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2708G>A (p.Gly903Asp) single nucleotide variant not specified [RCV004366990] Chr4:56316210 [GRCh38]
Chr4:57182376 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2780G>T (p.Arg927Leu) single nucleotide variant not specified [RCV004366992] Chr4:56316282 [GRCh38]
Chr4:57182448 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3317C>T (p.Thr1106Met) single nucleotide variant not specified [RCV004367002] Chr4:56323506 [GRCh38]
Chr4:57189672 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3347C>A (p.Ala1116Asp) single nucleotide variant not specified [RCV004367003] Chr4:56323536 [GRCh38]
Chr4:57189702 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3352C>G (p.Gln1118Glu) single nucleotide variant not specified [RCV004367004] Chr4:56323541 [GRCh38]
Chr4:57189707 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3530C>T (p.Thr1177Met) single nucleotide variant not specified [RCV004367006] Chr4:56324255 [GRCh38]
Chr4:57190421 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.451C>T (p.Arg151Cys) single nucleotide variant not specified [RCV004367011] Chr4:56313293 [GRCh38]
Chr4:57179459 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.58A>G (p.Ser20Gly) single nucleotide variant not specified [RCV004367015] Chr4:56298287 [GRCh38]
Chr4:57164453 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3272C>T (p.Thr1091Met) single nucleotide variant not specified [RCV004367000] Chr4:56323461 [GRCh38]
Chr4:57189627 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3535G>A (p.Val1179Met) single nucleotide variant not specified [RCV004367007] Chr4:56324260 [GRCh38]
Chr4:57190426 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.395C>T (p.Ser132Phe) single nucleotide variant not specified [RCV004367010] Chr4:56313237 [GRCh38]
Chr4:57179403 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2038G>A (p.Glu680Lys) single nucleotide variant not specified [RCV004374875] Chr4:56315540 [GRCh38]
Chr4:57181706 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2064G>C (p.Arg688Ser) single nucleotide variant not specified [RCV004374876] Chr4:56315566 [GRCh38]
Chr4:57181732 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2393T>G (p.Phe798Cys) single nucleotide variant not specified [RCV004374879] Chr4:56315895 [GRCh38]
Chr4:57182061 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1223G>A (p.Gly408Asp) single nucleotide variant not specified [RCV004374860] Chr4:56314725 [GRCh38]
Chr4:57180891 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1736G>A (p.Ser579Asn) single nucleotide variant not specified [RCV004374868] Chr4:56315238 [GRCh38]
Chr4:57181404 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1805A>C (p.Gln602Pro) single nucleotide variant not specified [RCV004374869] Chr4:56315307 [GRCh38]
Chr4:57181473 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1237G>C (p.Glu413Gln) single nucleotide variant not specified [RCV004374861] Chr4:56314739 [GRCh38]
Chr4:57180905 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1336G>C (p.Glu446Gln) single nucleotide variant not specified [RCV004374863] Chr4:56314838 [GRCh38]
Chr4:57181004 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1681G>A (p.Ala561Thr) single nucleotide variant not specified [RCV004374866] Chr4:56315183 [GRCh38]
Chr4:57181349 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1712A>G (p.Gln571Arg) single nucleotide variant not specified [RCV004374867] Chr4:56315214 [GRCh38]
Chr4:57181380 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.184G>A (p.Ala62Thr) single nucleotide variant not specified [RCV004374871] Chr4:56307598 [GRCh38]
Chr4:57173764 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.907G>A (p.Ala303Thr) single nucleotide variant not specified [RCV004367020] Chr4:56314409 [GRCh38]
Chr4:57180575 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2689G>C (p.Gly897Arg) single nucleotide variant not specified [RCV004366989] Chr4:56316191 [GRCh38]
Chr4:57182357 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2775C>A (p.Ser925Arg) single nucleotide variant not specified [RCV004366991] Chr4:56316277 [GRCh38]
Chr4:57182443 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.280A>G (p.Asn94Asp) single nucleotide variant not specified [RCV004366993] Chr4:56307694 [GRCh38]
Chr4:57173860 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.2923T>C (p.Ser975Pro) single nucleotide variant not specified [RCV004366996] Chr4:56316425 [GRCh38]
Chr4:57182591 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.296C>T (p.Thr99Met) single nucleotide variant not specified [RCV004366997] Chr4:56310676 [GRCh38]
Chr4:57176842 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3194C>T (p.Pro1065Leu) single nucleotide variant not specified [RCV004366999] Chr4:56323383 [GRCh38]
Chr4:57189549 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3314C>T (p.Ala1105Val) single nucleotide variant not specified [RCV004367001] Chr4:56323503 [GRCh38]
Chr4:57189669 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3433C>G (p.His1145Asp) single nucleotide variant not specified [RCV004367005] Chr4:56324158 [GRCh38]
Chr4:57190324 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.376C>T (p.Arg126Trp) single nucleotide variant not specified [RCV004367009] Chr4:56313218 [GRCh38]
Chr4:57179384 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.452G>A (p.Arg151His) single nucleotide variant not specified [RCV004367012] Chr4:56313294 [GRCh38]
Chr4:57179460 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.585C>A (p.Asp195Glu) single nucleotide variant not specified [RCV004367014] Chr4:56314087 [GRCh38]
Chr4:57180253 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.604G>A (p.Glu202Lys) single nucleotide variant not specified [RCV004367016] Chr4:56314106 [GRCh38]
Chr4:57180272 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.794G>A (p.Arg265Lys) single nucleotide variant not specified [RCV004367017] Chr4:56314296 [GRCh38]
Chr4:57180462 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.979G>T (p.Ala327Ser) single nucleotide variant not specified [RCV004367022] Chr4:56314481 [GRCh38]
Chr4:57180647 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1871T>C (p.Leu624Ser) single nucleotide variant not specified [RCV004374872] Chr4:56315373 [GRCh38]
Chr4:57181539 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.259A>G (p.Ile87Val) single nucleotide variant not specified [RCV004374880] Chr4:56307673 [GRCh38]
Chr4:57173839 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.3112A>G (p.Arg1038Gly) single nucleotide variant not specified [RCV004366998] Chr4:56316614 [GRCh38]
Chr4:57182780 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.914G>C (p.Arg305Pro) single nucleotide variant not specified [RCV004367021] Chr4:56314416 [GRCh38]
Chr4:57180582 [GRCh37]
Chr4:4q12
uncertain significance
NM_001393381.1(CRACD):c.1007A>C (p.Glu336Ala) single nucleotide variant not specified [RCV004347210] Chr4:56314509 [GRCh38]
Chr4:57180675 [GRCh37]
Chr4:4q12
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1138
Count of miRNA genes:649
Interacting mature miRNAs:719
Transcripts:ENST00000264229, ENST00000503618, ENST00000504228, ENST00000505410, ENST00000514330, ENST00000541073
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
STS-N21336  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,157,743 - 57,157,862UniSTSGRCh37
Build 36456,852,500 - 56,852,619RGDNCBI36
Celera454,664,182 - 54,664,301RGD
Cytogenetic Map4q12UniSTS
HuRef453,111,576 - 53,111,695UniSTS
GeneMap99-GB4 RH Map4347.8UniSTS
NCBI RH Map4688.0UniSTS
STS-N35889  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,196,567 - 57,196,743UniSTSGRCh37
Build 36456,891,324 - 56,891,500RGDNCBI36
Celera454,702,932 - 54,703,108RGD
Cytogenetic Map4q12UniSTS
HuRef453,150,349 - 53,150,525UniSTS
TNG Radiation Hybrid Map430696.0UniSTS
GeneMap99-GB4 RH Map4352.94UniSTS
RH94148  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,195,442 - 57,195,562UniSTSGRCh37
Build 36456,890,199 - 56,890,319RGDNCBI36
Celera454,701,808 - 54,701,928RGD
Cytogenetic Map4q12UniSTS
HuRef453,149,225 - 53,149,345UniSTS
GeneMap99-GB4 RH Map4350.24UniSTS
SHGC-18324  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,118,611 - 57,118,723UniSTSGRCh37
Build 36456,813,368 - 56,813,480RGDNCBI36
Celera454,625,084 - 54,625,196RGD
Cytogenetic Map4q12UniSTS
HuRef453,072,542 - 53,072,654UniSTS
SHGC-50836  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,118,593 - 57,118,723UniSTSGRCh37
Build 36456,813,350 - 56,813,480RGDNCBI36
Celera454,625,066 - 54,625,196RGD
Cytogenetic Map4q12UniSTS
HuRef453,072,524 - 53,072,654UniSTS
TNG Radiation Hybrid Map430578.0UniSTS
D4S1495E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,189,565 - 57,189,699UniSTSGRCh37
Build 36456,884,322 - 56,884,456RGDNCBI36
Celera454,695,950 - 54,696,084RGD
Cytogenetic Map4q12UniSTS
HuRef453,143,367 - 53,143,501UniSTS
G09535  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,196,984 - 57,197,127UniSTSGRCh37
Build 36456,891,741 - 56,891,884RGDNCBI36
Celera454,703,349 - 54,703,492RGD
Cytogenetic Map4q12UniSTS
HuRef453,150,766 - 53,150,909UniSTS
G34122  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,186,735 - 57,186,969UniSTSGRCh37
Build 36456,881,492 - 56,881,726RGDNCBI36
Celera454,693,120 - 54,693,354RGD
Cytogenetic Map4q12UniSTS
HuRef453,140,537 - 53,140,771UniSTS
D4S260  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37457,186,725 - 57,187,001UniSTSGRCh37
Build 36456,881,482 - 56,881,758RGDNCBI36
Celera454,693,110 - 54,693,386RGD
Cytogenetic Map4q12UniSTS
HuRef453,140,527 - 53,140,803UniSTS
TNG Radiation Hybrid Map430665.0UniSTS
Stanford-G3 RH Map43320.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 128 2 13 10 126 11 205 27 97 25 433 89 1
Low 1525 1146 464 112 659 103 1175 443 3342 168 830 675 14 192 1010 4
Below cutoff 778 1718 1184 464 1039 314 2853 1553 269 176 179 812 153 1002 1672

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001393381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005265752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005265755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005265756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006714045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011534397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017008473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017008474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047415994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047415995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB033037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC022267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC068620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC092627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK097530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK126014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL110138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL133028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL137336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC150615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC171783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HF584144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000264229   ⟹   ENSP00000264229
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,170,195 - 56,328,625 (+)Ensembl
RefSeq Acc Id: ENST00000503618   ⟹   ENSP00000494920
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,246,503 - 56,307,565 (+)Ensembl
RefSeq Acc Id: ENST00000504228   ⟹   ENSP00000423366
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,216,102 - 56,328,625 (+)Ensembl
RefSeq Acc Id: ENST00000505410
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,308,929 - 56,311,621 (+)Ensembl
RefSeq Acc Id: ENST00000514330   ⟹   ENSP00000473672
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,316,663 - 56,327,703 (+)Ensembl
RefSeq Acc Id: ENST00000541073   ⟹   ENSP00000444006
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,272,404 - 56,328,092 (+)Ensembl
RefSeq Acc Id: ENST00000629263   ⟹   ENSP00000486652
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,049,098 - 56,298,340 (+)Ensembl
RefSeq Acc Id: ENST00000636006   ⟹   ENSP00000490902
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,049,847 - 56,314,663 (+)Ensembl
RefSeq Acc Id: ENST00000646253   ⟹   ENSP00000495373
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,049,847 - 56,327,804 (+)Ensembl
RefSeq Acc Id: ENST00000682029   ⟹   ENSP00000507165
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl456,049,098 - 56,330,609 (+)Ensembl
RefSeq Acc Id: NM_001393381   ⟹   NP_001380310
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,049,098 - 56,330,609 (+)NCBI
T2T-CHM13v2.0459,537,287 - 59,818,577 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001393382   ⟹   NP_001380311
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,216,142 - 56,330,609 (+)NCBI
T2T-CHM13v2.0459,704,163 - 59,818,577 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001393383   ⟹   NP_001380312
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,049,098 - 56,330,609 (+)NCBI
T2T-CHM13v2.0459,537,287 - 59,818,577 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001393384   ⟹   NP_001380313
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,049,098 - 56,330,609 (+)NCBI
T2T-CHM13v2.0459,537,287 - 59,818,577 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001393385   ⟹   NP_001380314
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,216,142 - 56,330,609 (+)NCBI
T2T-CHM13v2.0459,704,163 - 59,818,577 (+)NCBI
Sequence:
RefSeq Acc Id: NM_020722   ⟹   NP_065773
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,170,195 - 56,330,609 (+)NCBI
GRCh37457,036,361 - 57,196,890 (+)RGD
Build 36456,731,118 - 56,891,647 (+)NCBI Archive
Celera454,542,821 - 54,703,255 (+)RGD
HuRef452,990,321 - 53,150,672 (+)RGD
CHM1_1457,071,533 - 57,232,004 (+)NCBI
T2T-CHM13v2.0459,658,187 - 59,818,577 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005265752   ⟹   XP_005265809
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,246,503 - 56,330,609 (+)NCBI
GRCh37457,036,361 - 57,196,890 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005265755   ⟹   XP_005265812
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,308,929 - 56,330,609 (+)NCBI
GRCh37457,036,361 - 57,196,890 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005265756   ⟹   XP_005265813
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,308,775 - 56,330,609 (+)NCBI
GRCh37457,036,361 - 57,196,890 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006714045   ⟹   XP_006714108
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,308,929 - 56,330,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017008473   ⟹   XP_016863962
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,298,257 - 56,330,609 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047415994   ⟹   XP_047271950
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,049,098 - 56,330,609 (+)NCBI
RefSeq Acc Id: XM_047415995   ⟹   XP_047271951
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,049,612 - 56,330,609 (+)NCBI
RefSeq Acc Id: XM_054350560   ⟹   XP_054206535
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,537,800 - 59,818,577 (+)NCBI
RefSeq Acc Id: XM_054350561   ⟹   XP_054206536
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,537,287 - 59,818,577 (+)NCBI
RefSeq Acc Id: XM_054350562   ⟹   XP_054206537
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,734,428 - 59,818,577 (+)NCBI
RefSeq Acc Id: XM_054350563   ⟹   XP_054206538
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,786,251 - 59,818,577 (+)NCBI
RefSeq Acc Id: XM_054350564   ⟹   XP_054206539
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,796,929 - 59,818,577 (+)NCBI
RefSeq Acc Id: XM_054350565   ⟹   XP_054206540
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,795,737 - 59,818,577 (+)NCBI
RefSeq Acc Id: XM_054350566   ⟹   XP_054206541
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0459,796,929 - 59,818,577 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001380310 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380311 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380312 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380313 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380314 (Get FASTA)   NCBI Sequence Viewer  
  NP_065773 (Get FASTA)   NCBI Sequence Viewer  
  XP_005265809 (Get FASTA)   NCBI Sequence Viewer  
  XP_005265812 (Get FASTA)   NCBI Sequence Viewer  
  XP_005265813 (Get FASTA)   NCBI Sequence Viewer  
  XP_006714108 (Get FASTA)   NCBI Sequence Viewer  
  XP_016863962 (Get FASTA)   NCBI Sequence Viewer  
  XP_047271950 (Get FASTA)   NCBI Sequence Viewer  
  XP_047271951 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206535 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206536 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206537 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206538 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206539 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206540 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206541 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI44537 (Get FASTA)   NCBI Sequence Viewer  
  AAI50616 (Get FASTA)   NCBI Sequence Viewer  
  AAI71783 (Get FASTA)   NCBI Sequence Viewer  
  BAA86525 (Get FASTA)   NCBI Sequence Viewer  
  BAC86392 (Get FASTA)   NCBI Sequence Viewer  
  BAG63771 (Get FASTA)   NCBI Sequence Viewer  
  CAB61360 (Get FASTA)   NCBI Sequence Viewer  
  CAB70699 (Get FASTA)   NCBI Sequence Viewer  
  CCQ43641 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000264229
  ENSP00000264229.6
  ENSP00000423366
  ENSP00000423366.1
  ENSP00000444006
  ENSP00000444006.1
  ENSP00000473672.1
  ENSP00000486652.1
  ENSP00000490902.1
  ENSP00000494920.1
  ENSP00000495373
  ENSP00000495373.2
  ENSP00000507165
  ENSP00000507165.1
GenBank Protein Q6ZU35 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_065773   ⟸   NM_020722
- Peptide Label: isoform 1
- UniProtKB: Q9NTP8 (UniProtKB/Swiss-Prot),   Q9NTE2 (UniProtKB/Swiss-Prot),   Q9ULK9 (UniProtKB/Swiss-Prot),   Q6ZU35 (UniProtKB/Swiss-Prot),   B7ZMH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005265809   ⟸   XM_005265752
- Peptide Label: isoform X2
- UniProtKB: Q9NTP8 (UniProtKB/Swiss-Prot),   Q9NTE2 (UniProtKB/Swiss-Prot),   Q9ULK9 (UniProtKB/Swiss-Prot),   Q6ZU35 (UniProtKB/Swiss-Prot),   B7ZMH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005265813   ⟸   XM_005265756
- Peptide Label: isoform X5
- UniProtKB: B7ZMH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005265812   ⟸   XM_005265755
- Peptide Label: isoform X4
- UniProtKB: B7ZMH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006714108   ⟸   XM_006714045
- Peptide Label: isoform X6
- UniProtKB: B7ZMH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016863962   ⟸   XM_017008473
- Peptide Label: isoform X3
- UniProtKB: F5H1N7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000444006   ⟸   ENST00000541073
RefSeq Acc Id: ENSP00000494920   ⟸   ENST00000503618
RefSeq Acc Id: ENSP00000490902   ⟸   ENST00000636006
RefSeq Acc Id: ENSP00000423366   ⟸   ENST00000504228
RefSeq Acc Id: ENSP00000486652   ⟸   ENST00000629263
RefSeq Acc Id: ENSP00000264229   ⟸   ENST00000264229
RefSeq Acc Id: ENSP00000495373   ⟸   ENST00000646253
RefSeq Acc Id: ENSP00000473672   ⟸   ENST00000514330
RefSeq Acc Id: NP_001380310   ⟸   NM_001393381
- Peptide Label: isoform 1
- UniProtKB: Q9NTP8 (UniProtKB/Swiss-Prot),   Q9NTE2 (UniProtKB/Swiss-Prot),   Q6ZU35 (UniProtKB/Swiss-Prot),   Q9ULK9 (UniProtKB/Swiss-Prot),   B7ZMH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380313   ⟸   NM_001393384
- Peptide Label: isoform 2
- UniProtKB: B7ZMH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380312   ⟸   NM_001393383
- Peptide Label: isoform 2
- UniProtKB: B7ZMH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380311   ⟸   NM_001393382
- Peptide Label: isoform 1
- UniProtKB: Q9NTP8 (UniProtKB/Swiss-Prot),   Q9NTE2 (UniProtKB/Swiss-Prot),   Q6ZU35 (UniProtKB/Swiss-Prot),   Q9ULK9 (UniProtKB/Swiss-Prot),   B7ZMH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380314   ⟸   NM_001393385
- Peptide Label: isoform 2
- UniProtKB: B7ZMH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000507165   ⟸   ENST00000682029
RefSeq Acc Id: XP_047271950   ⟸   XM_047415994
- Peptide Label: isoform X1
- UniProtKB: A0A2R8Y6P1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047271951   ⟸   XM_047415995
- Peptide Label: isoform X1
- UniProtKB: A0A2R8Y6P1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054206536   ⟸   XM_054350561
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054206535   ⟸   XM_054350560
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054206537   ⟸   XM_054350562
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054206538   ⟸   XM_054350563
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054206540   ⟸   XM_054350565
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054206539   ⟸   XM_054350564
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054206541   ⟸   XM_054350566
- Peptide Label: isoform X6
Protein Domains
DUF4592

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6ZU35-F1-model_v2 AlphaFold Q6ZU35 1-1233 view protein structure

Promoters
RGD ID:6867502
Promoter ID:EPDNEW_H6916
Type:initiation region
Name:KIAA1211_1
Description:KIAA1211
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H6917  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,272,416 - 56,272,476EPDNEW
RGD ID:6867504
Promoter ID:EPDNEW_H6917
Type:initiation region
Name:KIAA1211_2
Description:KIAA1211
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H6916  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38456,308,959 - 56,309,019EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29219 AgrOrtholog
COSMIC CRACD COSMIC
Ensembl Genes ENSG00000109265 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000264229 ENTREZGENE
  ENST00000264229.11 UniProtKB/Swiss-Prot
  ENST00000503618.1 UniProtKB/TrEMBL
  ENST00000504228 ENTREZGENE
  ENST00000504228.6 UniProtKB/Swiss-Prot
  ENST00000514330.1 UniProtKB/TrEMBL
  ENST00000541073 ENTREZGENE
  ENST00000541073.5 UniProtKB/TrEMBL
  ENST00000629263.3 UniProtKB/TrEMBL
  ENST00000636006.1 UniProtKB/TrEMBL
  ENST00000646253 ENTREZGENE
  ENST00000646253.2 UniProtKB/TrEMBL
  ENST00000682029 ENTREZGENE
  ENST00000682029.1 UniProtKB/Swiss-Prot
GTEx ENSG00000109265 GTEx
HGNC ID HGNC:29219 ENTREZGENE
Human Proteome Map CRACD Human Proteome Map
InterPro DUF4592 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:57482 UniProtKB/Swiss-Prot
NCBI Gene 57482 ENTREZGENE
OMIM 618327 OMIM
PANTHER CANCER-RELATED REGULATOR OF ACTIN DYNAMICS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CAPPING PROTEIN-INHIBITING REGULATOR OF ACTIN DYNAMICS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF4592 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0D9SFJ2_HUMAN UniProtKB/TrEMBL
  A0A1B0GWF1_HUMAN UniProtKB/TrEMBL
  A0A2R8Y5Y4_HUMAN UniProtKB/TrEMBL
  A0A2R8Y6P1 ENTREZGENE, UniProtKB/TrEMBL
  B7ZMH1 ENTREZGENE, UniProtKB/TrEMBL
  CRAD_HUMAN UniProtKB/Swiss-Prot
  F5H1N7 ENTREZGENE, UniProtKB/TrEMBL
  Q6ZU35 ENTREZGENE
  Q9NTE2 ENTREZGENE
  Q9NTP8 ENTREZGENE
  Q9ULK9 ENTREZGENE
  R4GNI9_HUMAN UniProtKB/TrEMBL
UniProt Secondary Q9NTE2 UniProtKB/Swiss-Prot
  Q9NTP8 UniProtKB/Swiss-Prot
  Q9ULK9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-20 CRACD  capping protein inhibiting regulator of actin dynamics  KIAA1211  KIAA1211  Symbol and/or name change 5135510 APPROVED