Gm10132 (predicted gene 10132) - Rat Genome Database

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Gene: Gm10132 (predicted gene 10132) Mus musculus
Analyze
No known orthologs.
Symbol: Gm10132
Name: predicted gene 10132
RGD ID: 2294076
MGI Page MGI
Description: Orthologous to human RPL23A (ribosomal protein L23a). [provided by Alliance of Genome Resources, Apr 2022]
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: ENSMUSG00000063556; predicted gene, ENSMUSG00000063556
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Related Functional Gene: Rpl23a  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391477,489,236 - 77,489,767 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1477,489,287 - 77,489,754 (-)EnsemblGRCm39 Ensembl
GRCm381477,251,796 - 77,252,327 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1477,251,847 - 77,252,314 (-)EnsemblGRCm38mm10GRCm38
MGSCv371477,651,608 - 77,652,121 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361477,651,588 - 77,652,137 (-)NCBIMGSCv36mm8
Celera1474,757,446 - 74,757,917 (-)NCBICelera
Cytogenetic Map14D3NCBI
cM Map1440.67NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:25921334  


Genomics

Variants

.
Variants in Gm10132
16 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:116
Count of miRNA genes:112
Interacting mature miRNAs:115
Transcripts:ENSMUST00000099431
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
4142364Pbwg18_mpostnatal body weight growth 18 (mouse)Not determined145228198486282125Mouse
1301489Lbm10_mlean body mass 10 (mouse)Not determined145376129687761529Mouse
12880432Fgf23lq3_mFGF23 serum level QTL 3 (mouse)145393744087937440Mouse
10043889Cia52_mcollagen induced arthritis QTL 52 (mouse)Not determined145608238190082509Mouse
1301562Hwq1_mheart weight quantitative locus 1 (mouse)Not determined145654674590546941Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1458179640101859473Mouse
11039527Ccc2_mcolitis susceptibility in the Collaborative Cross 2 (mouse)145991861294138217Mouse
1300666Fembm2_mfemoral bone morphometry 2 (mouse)Not determined146239746096397680Mouse
14747006Mancz12_mmandible centroid size 12 (mouse)1470071977104071977Mouse
10054475Ossc3_mosteosarcoma susceptibility 3 (mouse)Not determined1470863768104863926Mouse
1300551Lprm3_mlymphoproliferation modifier 3 (mouse)Not determined1471221224105221344Mouse
1301844Pgia29_mproteoglycan induced arthritis 29 (mouse)Not determined1474352296108352384Mouse
1558819Ossc2_mosteosarcoma susceptibility 2 (mouse)Not determined1474394976108395093Mouse
14928314Manh77_mmandible shape 77 (mouse)1476767790110767790Mouse
1558823Tbbmd6_mtotal body bone mineral density 6 (mouse)Not determined1477073696111073787Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000099431
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1477,489,287 - 77,489,754 (-)Ensembl
GRCm38.p6 Ensembl1477,251,847 - 77,252,314 (-)Ensembl
RefSeq Acc Id: XM_001480900   ⟹   XP_001480950
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381477,251,801 - 77,252,314 (-)ENTREZGENE
MGSCv371477,651,608 - 77,652,121 (-)RGD
cM Map14 ENTREZGENE
RefSeq Acc Id: XM_003085936   ⟹   XP_003085984
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
Celera1474,757,446 - 74,757,917 (-)RGD

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3704449 AgrOrtholog
Ensembl Genes ENSMUSG00000063556 Ensembl, ENTREZGENE
MGD MGI:3704449 ENTREZGENE
NCBI Gene 100043755 ENTREZGENE
PhenoGen Gm10132 PhenoGen