RNU7-72P (RNA, U7 small nuclear 72 pseudogene) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: RNU7-72P (RNA, U7 small nuclear 72 pseudogene) Homo sapiens
Analyze
Symbol: RNU7-72P
Name: RNA, U7 small nuclear 72 pseudogene
RGD ID: 2293227
HGNC Page HGNC:34168
Description:
Type: pseudo
RefSeq Status: INFERRED
Previously known as: U7.72
Related Functional Gene: RNU7-1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382049,827,996 - 49,828,052 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372048,444,533 - 48,444,589 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362048,444,533 - 48,444,589 (+)NCBINCBI36Build 36hg18NCBI36
Celera2045,149,126 - 45,149,182 (+)NCBICelera
Cytogenetic Map20q13.13NCBI
HuRef2045,193,825 - 45,193,881 (+)NCBIHuRef
CHM1_12048,349,216 - 48,349,272 (+)NCBICHM1_1
T2T-CHM13v2.02051,597,522 - 51,597,578 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:18267300  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:238
Count of miRNA genes:231
Interacting mature miRNAs:237
Transcripts:ENST00000516314
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC RNU7-72P COSMIC
GTEx RNU7-72P GTEx
HGNC ID HGNC:34168 ENTREZGENE
Human Proteome Map RNU7-72P Human Proteome Map
NCBI Gene 100151669 ENTREZGENE