Vmn2r-ps110 (vomeronasal 2, receptor, pseudogene 110) - Rat Genome Database

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Gene: Vmn2r-ps110 (vomeronasal 2, receptor, pseudogene 110) Mus musculus
Analyze
Symbol: Vmn2r-ps110
Name: vomeronasal 2, receptor, pseudogene 110
RGD ID: 2292273
MGI Page MGI
Description:
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Vmn2r28  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391451,614,755 - 51,618,444 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1451,614,741 - 51,618,431 (+)EnsemblGRCm39 Ensembl
GRCm381451,377,298 - 51,380,987 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1451,377,284 - 51,380,974 (+)EnsemblGRCm38mm10GRCm38
MGSCv371451,996,973 - 52,000,662 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361451,996,905 - 52,000,668 (+)NCBIMGSCv36mm8
Celera1447,702,964 - 47,706,652 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1426.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:17382427  


Genomics

Variants

.
Variants in Vmn2r-ps110
129 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
4141484Hcbip1_mhexachlorobenzene induced porphyria 1 (mouse)Not determined4733525059962593Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
4142310Carg1_mCandida albicans resistance gene 1 (mouse)Not determined5138245954461655Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_006858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000226212
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1451,614,741 - 51,618,185 (+)Ensembl
GRCm38.p6 Ensembl1451,377,284 - 51,380,728 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228290
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1451,614,741 - 51,618,431 (+)Ensembl
GRCm38.p6 Ensembl1451,377,284 - 51,380,974 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000115166 Ensembl
  ENSMUSG00000121466 ENTREZGENE
MGD MGI:3761529 ENTREZGENE
NCBI Gene 671357 ENTREZGENE
PhenoGen Vmn2r-ps110 PhenoGen