OXLD1 (oxidoreductase like domain containing 1)

Gene: OXLD1 (oxidoreductase like domain containing 1) Homo sapiens

Analyze

Symbol:

OXLD1

Name:

oxidoreductase like domain containing 1

RGD ID:

2290031

HGNC Page

HGNC:27901

Description:

Predicted to be located in mitochondrion; INTERACTS WITH Aflatoxin B2 alpha; benzo[a]pyrene; cisplatin.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

C17orf90; hypothetical protein LOC339229; MGC104712; oxidoreductase-like domain containing 1; oxidoreductase-like domain-containing protein 1; uncharacterized protein C17orf90

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	81,665,036 - 81,666,635 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	79,632,066 - 79,633,635 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	77,242,471 - 77,244,023 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	76,276,983 - 76,278,535 (-)	NCBI		Celera
Cytogenetic Map	17	q25.3	NCBI
HuRef	17	75,078,237 - 75,079,789 (-)	NCBI		HuRef
CHM1_1	17	79,718,287 - 79,719,839 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (ISO)

Aflatoxin B2 alpha (EXP)

benzo[a]pyrene (EXP)

bisphenol A (ISO)

bisphenol F (ISO)

carbon nanotube (ISO)

cisplatin (EXP)

clofibrate (ISO)

cyclosporin A (EXP)

fenthion (ISO)

folic acid (ISO)

gentamycin (ISO)

inulin (ISO)

paracetamol (ISO)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (ISO)

resveratrol (EXP)

temozolomide (EXP)

tetrachloromethane (ISO)

thioacetamide (ISO)

urethane (EXP)

valproic acid (EXP)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8619474	PMID:9110174	PMID:12477932	PMID:17213182	PMID:20877624	PMID:26186194	PMID:28514442	PMID:30652415	PMID:33961781

Genomics

Comparative Map Data

OXLD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	81,665,036 - 81,666,635 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	79,632,066 - 79,633,635 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	77,242,471 - 77,244,023 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	76,276,983 - 76,278,535 (-)	NCBI		Celera
Cytogenetic Map	17	q25.3	NCBI
HuRef	17	75,078,237 - 75,079,789 (-)	NCBI		HuRef
CHM1_1	17	79,718,287 - 79,719,839 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI		T2T-CHM13v2.0

Oxld1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	120,347,427 - 120,348,896 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	120,347,432 - 120,348,894 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	120,456,601 - 120,458,070 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	120,456,606 - 120,458,068 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	120,317,918 - 120,319,377 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	120,272,694 - 120,274,153 (-)	NCBI		MGSCv36	mm8
Celera	11	132,192,034 - 132,193,493 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	84.15	NCBI

Oxld1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	106,227,633 - 106,229,027 (-)	NCBI		GRCr8
mRatBN7.2	10	105,729,285 - 105,731,278 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	105,729,288 - 105,731,487 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	110,833,642 - 110,835,036 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	110,296,672 - 110,298,066 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	105,649,751 - 105,651,145 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	109,628,611 - 109,630,005 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	109,628,772 - 109,630,005 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	109,222,175 - 109,223,569 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	10	104,273,330 - 104,274,724 (-)	NCBI		Celera
Cytogenetic Map	10	q32.3	NCBI

Oxld1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	1,433,796 - 1,434,987 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955506	1,433,754 - 1,435,141 (+)	NCBI	ChiLan1.0	ChiLan1.0

OXLD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	98,254,964 - 98,256,584 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	103,155,379 - 103,157,018 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	76,124,275 - 76,125,889 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	81,824,942 - 81,826,536 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	81,824,942 - 81,826,536 (-)	Ensembl	panpan1.1		panPan2

OXLD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	522,819 - 524,060 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	522,876 - 524,057 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	1,125,015 - 1,126,238 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	1,116,337 - 1,117,560 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	1,116,378 - 1,117,559 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	1,141,250 - 1,142,473 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	1,267,852 - 1,269,075 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	1,346,857 - 1,348,080 (+)	NCBI		UU_Cfam_GSD_1.0

Oxld1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	1,140,535 - 1,141,982 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936594	5,269,975 - 5,271,375 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OXLD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	1,232,872 - 1,234,375 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	1,232,836 - 1,234,381 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

OXLD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	73,596,584 - 73,597,765 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666077	45,002,854 - 45,004,428 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Oxld1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624801	10,604,515 - 10,605,929 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in OXLD1
6 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 17q25.3(chr17:78901959-83086677)x3	copy number gain	See cases [RCV000050934]	Chr17:78901959..83086677 [GRCh38] Chr17:76898041..81044553 [GRCh37] Chr17:74409636..78637842 [NCBI36] Chr17:17q25.3	pathogenic
GRCh38/hg38 17q25.3(chr17:78092236-83086677)x3	copy number gain	See cases [RCV000050685]	Chr17:78092236..83086677 [GRCh38] Chr17:76088317..81044553 [GRCh37] Chr17:73599912..78637842 [NCBI36] Chr17:17q25.3	pathogenic
GRCh38/hg38 17q24.3-25.3(chr17:69209079-83086677)x3	copy number gain	See cases [RCV000052486]	Chr17:69209079..83086677 [GRCh38] Chr17:67205220..81044553 [GRCh37] Chr17:64716815..78637842 [NCBI36] Chr17:17q24.3-25.3	pathogenic
GRCh38/hg38 17q25.3(chr17:78918650-83021095)x3	copy number gain	See cases [RCV000052497]	Chr17:78918650..83021095 [GRCh38] Chr17:76914732..80978971 [GRCh37] Chr17:74426327..78572260 [NCBI36] Chr17:17q25.3	pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]\|See cases [RCV000052483]	Chr17:36449220..83086677 [GRCh38] Chr17:58617905..81044553 [GRCh37] Chr17:55972687..78637842 [NCBI36] Chr17:17q23.2-25.3	pathogenic
GRCh38/hg38 17q25.3(chr17:80328106-83086677)x1	copy number loss	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053454]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053454]\|See cases [RCV000053454]	Chr17:80328106..83086677 [GRCh38] Chr17:78301906..81044553 [GRCh37] Chr17:75916501..78637842 [NCBI36] Chr17:17q25.3	pathogenic
GRCh38/hg38 17q25.3(chr17:81008196-83102584)x3	copy number gain	See cases [RCV000138688]	Chr17:81008196..83102584 [GRCh38] Chr17:78981996..81048189 [GRCh37] Chr17:76596591..78653749 [NCBI36] Chr17:17q25.3	pathogenic
GRCh38/hg38 17q25.3(chr17:81401966-83084062)x1	copy number loss	See cases [RCV000142007]	Chr17:81401966..83084062 [GRCh38] Chr17:79375766..81041938 [GRCh37] Chr17:76990361..78635227 [NCBI36] Chr17:17q25.3	likely pathogenic
GRCh38/hg38 17q24.3-25.3(chr17:69916435-83102552)x3	copy number gain	See cases [RCV000143342]	Chr17:69916435..83102552 [GRCh38] Chr17:67912576..81048189 [GRCh37] Chr17:65424171..78653717 [NCBI36] Chr17:17q24.3-25.3	pathogenic
GRCh37/hg19 17q25.3(chr17:78514452-81041938)x1	copy number loss	See cases [RCV000449416]	Chr17:78514452..81041938 [GRCh37] Chr17:17q25.3	pathogenic
GRCh37/hg19 17q25.1-25.3(chr17:73951701-81041938)x3	copy number gain	See cases [RCV000447539]	Chr17:73951701..81041938 [GRCh37] Chr17:17q25.1-25.3	pathogenic
GRCh37/hg19 17q24.2-25.3(chr17:64241326-81041938)x3	copy number gain	See cases [RCV000447577]	Chr17:64241326..81041938 [GRCh37] Chr17:17q24.2-25.3	pathogenic
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3	copy number gain	See cases [RCV000447823]	Chr17:42580684..81085615 [GRCh37] Chr17:17q21.31-25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)	copy number gain	See cases [RCV000511439]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q25.1-25.3(chr17:73951701-81041938)x3	copy number gain	See cases [RCV000510919]	Chr17:73951701..81041938 [GRCh37] Chr17:17q25.1-25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3	copy number gain	See cases [RCV000512441]	Chr17:526..81041938 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q24.2-25.3(chr17:67002415-81041938)x3	copy number gain	See cases [RCV000512573]	Chr17:67002415..81041938 [GRCh37] Chr17:17q24.2-25.3	pathogenic
GRCh37/hg19 17q24.1-25.3(chr17:63689671-81041938)x3	copy number gain	not provided [RCV000683952]	Chr17:63689671..81041938 [GRCh37] Chr17:17q24.1-25.3	pathogenic
GRCh37/hg19 17q25.3(chr17:76552611-81041938)x3	copy number gain	not provided [RCV000683965]	Chr17:76552611..81041938 [GRCh37] Chr17:17q25.3	likely pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3	copy number gain	not provided [RCV000739325]	Chr17:12344..81057996 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3	copy number gain	not provided [RCV000739324]	Chr17:8547..81060040 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3	copy number gain	not provided [RCV000739320]	Chr17:7214..81058310 [GRCh37] Chr17:17p13.3-q25.3	pathogenic
GRCh37/hg19 17q25.3(chr17:79496613-79693150)x3	copy number gain	not provided [RCV000848240]	Chr17:79496613..79693150 [GRCh37] Chr17:17q25.3	uncertain significance
GRCh37/hg19 17q25.3(chr17:79531886-79685043)x1	copy number loss	not provided [RCV000846802]	Chr17:79531886..79685043 [GRCh37] Chr17:17q25.3	uncertain significance
GRCh37/hg19 17q24.1-25.3(chr17:62778720-81041938)x3	copy number gain	not provided [RCV000849900]	Chr17:62778720..81041938 [GRCh37] Chr17:17q24.1-25.3	pathogenic
GRCh37/hg19 17q25.3(chr17:78608912-81041938)x3	copy number gain	not provided [RCV000848418]	Chr17:78608912..81041938 [GRCh37] Chr17:17q25.3	pathogenic
NC_000017.10:g.(?_79618104)_(79894690_?)dup	duplication	not provided [RCV003109580]	Chr17:79618104..79894690 [GRCh37] Chr17:17q25.3	uncertain significance
NC_000017.10:g.(?_79618104)_(79674270_?)del	deletion	not provided [RCV003122585]	Chr17:79618104..79674270 [GRCh37] Chr17:17q25.3	pathogenic
NC_000017.10:g.(?_79477716)_(80900339_?)dup	duplication	not provided [RCV003122586]	Chr17:79477716..80900339 [GRCh37] Chr17:17q25.3	uncertain significance
GRCh37/hg19 17q25.1-25.3(chr17:73481509-81043199)x3	copy number gain	not provided [RCV002276051]	Chr17:73481509..81043199 [GRCh37] Chr17:17q25.1-25.3	pathogenic
NM_001039842.3(OXLD1):c.131A>G (p.His44Arg)	single nucleotide variant	not specified [RCV004156977]	Chr17:81665514 [GRCh38] Chr17:79632544 [GRCh37] Chr17:17q25.3	uncertain significance
NM_001039842.3(OXLD1):c.67C>G (p.Arg23Gly)	single nucleotide variant	not specified [RCV004217177]	Chr17:81665578 [GRCh38] Chr17:79632608 [GRCh37] Chr17:17q25.3	uncertain significance
NM_001039842.3(OXLD1):c.398C>G (p.Ala133Gly)	single nucleotide variant	not specified [RCV004211763]	Chr17:81665247 [GRCh38] Chr17:79632277 [GRCh37] Chr17:17q25.3	uncertain significance
NM_001039842.3(OXLD1):c.65C>T (p.Ala22Val)	single nucleotide variant	not specified [RCV004150610]	Chr17:81665580 [GRCh38] Chr17:79632610 [GRCh37] Chr17:17q25.3	uncertain significance
NM_001039842.3(OXLD1):c.367G>A (p.Glu123Lys)	single nucleotide variant	not specified [RCV004230502]	Chr17:81665278 [GRCh38] Chr17:79632308 [GRCh37] Chr17:17q25.3	uncertain significance
Single allele	deletion	See cases [RCV003154621]	Chr17:79539041..81052322 [GRCh37] Chr17:17q25.3	pathogenic
NM_001039842.3(OXLD1):c.281G>A (p.Gly94Asp)	single nucleotide variant	not specified [RCV004288237]	Chr17:81665364 [GRCh38] Chr17:79632394 [GRCh37] Chr17:17q25.3	uncertain significance
GRCh37/hg19 17q25.3(chr17:79128754-80092824)x1	copy number loss	not provided [RCV003483326]	Chr17:79128754..80092824 [GRCh37] Chr17:17q25.3	likely pathogenic
NM_001039842.3(OXLD1):c.95A>G (p.Gln32Arg)	single nucleotide variant	not specified [RCV004497415]	Chr17:81665550 [GRCh38] Chr17:79632580 [GRCh37] Chr17:17q25.3	uncertain significance

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1805
Count of miRNA genes:	578
Interacting mature miRNAs:	644
Transcripts:	ENST00000374741, ENST00000571092, ENST00000571503, ENST00000571757, ENST00000573786, ENST00000575963, ENST00000575992
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

RH102453

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	17	79,632,124 - 79,632,296	UniSTS	GRCh37
Build 36	17	77,242,529 - 77,242,701	RGD	NCBI36
Celera	17	76,277,041 - 76,277,213	RGD
Cytogenetic Map	17	q25.3	UniSTS
HuRef	17	75,078,295 - 75,078,467	UniSTS
GeneMap99-GB4 RH Map	17	527.42	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

pharyngeal arch

High

Medium

2420

2437

1621

523

1691

364

3989

1637

3435

409

1443

1596

171

1169

2429

Low

554

105

101

260

101

367

560

299

359

Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_009834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001039842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001304994	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001304995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001304999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_130936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_130937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_130938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_130939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC139530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY007126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC038412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC048102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC090923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE386163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU194770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB048026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DT220680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HY012937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HY056467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000374741 ⟹ ENSP00000363873

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	81,665,036 - 81,666,605 (-)	Ensembl

RefSeq Acc Id:

ENST00000571092 ⟹ ENSP00000459281

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	81,665,461 - 81,666,578 (-)	Ensembl

RefSeq Acc Id:

ENST00000571503 ⟹ ENSP00000466256

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	81,665,101 - 81,666,595 (-)	Ensembl

RefSeq Acc Id:

ENST00000571757 ⟹ ENSP00000459191

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	81,665,141 - 81,666,633 (-)	Ensembl

RefSeq Acc Id:

ENST00000573786

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	81,665,056 - 81,666,146 (-)	Ensembl

RefSeq Acc Id:

ENST00000575963

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	81,665,036 - 81,666,635 (-)	Ensembl

RefSeq Acc Id:

ENST00000575992 ⟹ ENSP00000459374

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	17	81,665,156 - 81,666,537 (-)	Ensembl

RefSeq Acc Id:

NM_001039842 ⟹ NP_001034931

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
GRCh37	17	79,632,066 - 79,633,618 (-)	RGD
Build 36	17	77,242,471 - 77,244,023 (-)	NCBI Archive
Celera	17	76,276,983 - 76,278,535 (-)	RGD
HuRef	17	75,078,237 - 75,079,789 (-)	RGD
CHM1_1	17	79,718,287 - 79,719,888 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGGGGCTCGCCGGTTCTCCAGCCCGGACTGCTGCCAGAGGC
TTCCTGGAGGTGGCAGCTTTCTTCAAAGGCACCATCCCGGAGCGCAAGCCCCTGATGGGCGCAG
AAAATTCGGGACAGACCACGTAGAGGTGGGCTCCCAAGCAGGTGCGGACGGCACCAGGCCGCCC
AAGGCATCGCTGCCACCTGAGCTCCAGCCGCCCACAAACTGCTGCATGAGTGGCTGCCCCAACT
GCGTGTGGGTGGAGTACGCGGACAGGCTGCTGCAGCACTTCCAGGACGGTGGGGAGCGGGCCCT
GGCTGCCCTGGAGGAGCACGTGGCTGATGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGG
CTGCACACCAGGTGCGGAGGCTGAGCCATCCCTGCTGGACTCCCTACCGCAGGACGGAGTCCAG
GACGCAGCCGCAGCCTCCTTCCTTCACACCCCCTCACAGACTCCTTGTGTCCAACGGGAATAGG
AAGAATTAGTTACTGACTTCACCTGAGAAAAAAATAAATTCTCTATGGTGGTTTCACAGGA

hide sequence

RefSeq Acc Id:

NM_001304994 ⟹ NP_001291923

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
CHM1_1	17	79,718,287 - 79,719,888 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGCAAGTACCAGGACGGGTCTTGGCAGCGCCGAAGGGCACG
TCCGAGAGGCCGCTGTCCGGGGGCCCGCACGTACCGGGAGGAGCCCCGGCCCCTCCACCCGCAT
GTGGGGACGGAGCCGGGAGGATCGCGCGCTGGCCGCCGCCGAAGGACCCCTCGCTCCTCTCCTC
CATCGGCTCTTACCGAGTCCCCGCCCCGGAATCTGTGGAGGGGCCGCTTAGCCTTGGGAGAGGA
AGCAGCCCGGTGAACGGCCACTTTCCTGTTTCTCAGTATCTGCCGAGCGCCTGTGTGCGAGCCC
TCCTGGGCTCTGGGGACTGGCCGTGGACATGGAGCGGATGATGCCCCTCGCAGGACTAGGGGCT
CGCCGGTTCTCCAGCCCGGACTGCTGCCAGAGGCTTCCTGGAGGTGGCAGCTTTCTTCAAAGGC
ACCATCCCGGAGCGCAAGCCCCTGATGGGCGCAGAAAATTCGGGACAGACCACGTAGAGGTGGG
CTCCCAAGCAGGTGCGGACGGCACCAGGCCGCCCAAGGCATCGCTGCCACCTGAGCTCCAGCCG
CCCACAAACTGCTGCATGAGTGGCTGCCCCAACTGCGTGTGGGTGGAGTACGCGGACAGGCTGC
TGCAGCACTTCCAGGACGGTGGGGAGCGGGCCCTGGCTGCCCTGGAGGAGCACGTGGCTGATGA
GAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTGCACACCAGGTGCGGAGGCTGAGCCATC
CCTGCTGGACTCCCTACCGCAGGACGGAGTCCAGGACGCAGCCGCAGCCTCCTTCCTTCACACC
CCCTCACAGACTCCTTGTGTCCAACGGGAATAGGAAGAATTAGTTACTGACTTCACCTGAGAAA
AAAATAAATTCTCTATGGTGGTTTCACAGGA

hide sequence

RefSeq Acc Id:

NM_001304995 ⟹ NP_001291924

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
CHM1_1	17	79,718,287 - 79,719,888 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGCAAGTACCAGGACGGGTCTTGGCAGCGCCGAAGGGCACG
TCCGAGAGGCCGCTGTCCGGGGGCCCGCACGTACCGGGAGGAGCCCCGGCCCCTCCACCCGCAT
GTGGGGACGGAGCCGGGAGGATCGCGCGCTGGCCGCCGCCGAAGGACCCCTCGCTCCTCTCCTC
CATCGGCTCTTACCGAGTCCCCGCCCCGGAATCTGTGGAGGGGCCGCTTAGCCTTGGGAGAGGA
AGCAGCCCGGGGGCTCGCCGGTTCTCCAGCCCGGACTGCTGCCAGAGGCTTCCTGGAGGTGGCA
GCTTTCTTCAAAGGCACCATCCCGGAGCGCAAGCCCCTGATGGGCGCAGAAAATTCGGGACAGA
CCACGTAGAGGTGGGCTCCCAAGCAGGTGCGGACGGCACCAGGCCGCCCAAGGCATCGCTGCCA
CCTGAGCTCCAGCCGCCCACAAACTGCTGCATGAGTGGCTGCCCCAACTGCGTGTGGGTGGAGT
ACGCGGACAGGCTGCTGCAGCACTTCCAGGACGGTGGGGAGCGGGCCCTGGCTGCCCTGGAGGA
GCACGTGGCTGATGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTGCACACCAGGTGC
GGAGGCTGAGCCATCCCTGCTGGACTCCCTACCGCAGGACGGAGTCCAGGACGCAGCCGCAGCC
TCCTTCCTTCACACCCCCTCACAGACTCCTTGTGTCCAACGGGAATAGGAAGAATTAGTTACTG
ACTTCACCTGAGAAAAAAATAAATTCTCTATGGTGGTTTCACAGGA

hide sequence

RefSeq Acc Id:

NM_001304999 ⟹ NP_001291928

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
CHM1_1	17	79,718,287 - 79,719,888 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGCAAGTACCAGGACGGGTCTTGGCAGCGCCGAAGGGCACG
TCCGAGAGGCCGCTGTCCGGGGGCCCGCACGTACCGGGAGGAGCCCCGGCCCCTCCACCCGCAT
GTGGGGACGGAGCCGGGAGGATCGCGCGCTGGCCGCCGCCGAAGGACCCCTCGCTCCTCTCCTC
CATCGGCTCTTACCGAGTCCCCGCCCCGGAATCTGTGGAGGGGCCGCTTAGCCTTGGGAGAGGA
AGCAGCCCGGTGAACGGCCACTTTCCTGTTTCTCAGTATCTGCCGAGCGCCTGTGTGCGAGCCC
TCCTGGGCTCTGGGGACTGGCCGTGGACATGGAGCGGATGATGCCCCTCGCAGGACTAGTTAAA
TAAGTGAAGTTGGTAGCGTGTCAGTCCGTGATCCTGGGTAGATAGAGCAGGGCAGCGACGGAAG
ACTGCCTATAGGACATTCACGCTGGGATGAGAGGGGCCTGAGAGGCCTGGGCTTTGTGACAGGG
AAACTTGGATAAAGGGTGGTGCGATTCTTCCGGTTGGTCCCTCAGAGGTGGTGGGGCTTGGTTA
TACTGGTAGAGGTGCTGGGCTGGCCAGGAGCTTACAGGGTTACACCTCTCGCATACTGGTGTCC
ACAGAGCAGCCATCTTAGCTGGAGGTGTCGAGTGCCTCCCCCACCCCCCACCATGTGCTTGAGT
GCACACCCGGCGCCAGGCCCTGATCCTGGCACTTCTTGTGAATCACACCGTGTCATACCCATGA
CTTCCATTGCACAGTGGGGAAACTGAGTCTAGAGAGGTGAAATAACATGTCTAAAGTCACAGGA
AGTGAAAAAGCTGAGGACATGGAGCCAGTTGCCCAATGACAGGAGAGCTGAAATGTCCTCACTG
CTGGGGGTAGACCGGGCCTCACCAGCTTCCTGGAGAGTCACATGTTTGTCTGCATCCTCAGGGG
GCTCGCCGGTTCTCCAGCCCGGACTGCTGCCAGAGGCTTCCTGGAGGTGGCAGCTTTCTTCAAA
GGCACCATCCCGGAGCGCAAGCCCCTGATGGGCGCAGAAAATTCGGGACAGACCACGTAGAGGT
GGGCTCCCAAGCAGGTGCGGACGGCACCAGGCCGCCCAAGGCATCGCTGCCACCTGAGCTCCAG
CCGCCCACAAACTGCTGCATGAGTGGCTGCCCCAACTGCGTGTGGGTGGAGTACGCGGACAGGC
TGCTGCAGCACTTCCAGGACGGTGGGGAGCGGGCCCTGGCTGCCCTGGAGGAGCACGTGGCTGA
TGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTGCACACCAGGTGCGGAGGCTGAGCC
ATCCCTGCTGGACTCCCTACCGCAGGACGGAGTCCAGGACGCAGCCGCAGCCTCCTTCCTTCAC
ACCCCCTCACAGACTCCTTGTGTCCAACGGGAATAGGAAGAATTAGTTACTGACTTCACCTGAG
AAAAAAATAAATTCTCTATGGTGGTTTCACAGGA

hide sequence

RefSeq Acc Id:

NR_130936

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
CHM1_1	17	79,718,287 - 79,719,888 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGCAAGTACCAGGACGGGTCTTGGCAGCGCCGAAGGGCACG
TCCGAGAGGCCGCTGTCCGGGGGCCCGCACGTACCGGGAGGAGCCCCGGCCCCTCCACCCGCAT
GTGGGGACGGAGCCGGGAGGATCGCGCGCTGGCCGCCGCCGAAGGACCCCTCGCTCCTCTCCTC
CATCGGCTCTTACCGAGTCCCCGCCCCGGAATCTGTGGAGGGGCCGCTTAGCCTTGGGAGAGGA
AGCAGCCCGGTGAACGGCCACTTTCCTGTTTCTCAGTATCTGCCGAGCGCCTGTGTGCGAGCCC
TCCTGGGCTCTGGGGACTGGCCGTGGACATGGAGCGGATGATGCCCCTCGCAGGACTAGTTAAA
TAAGGGGCTCGCCGGTTCTCCAGCCCGGACTGCTGCCAGAGGCTTCCTGGAGGTGGCAGCTTTC
TTCAAAGGCACCATCCCGGAGCGCAAGCCCCTGATGGGCGCAGAAAATTCGGGACAGACCACGT
AGAGGTGGGCTCCCAAGCAGGTGCGGACGGCACCAGGCCGCCCAAGGCATCGCTGCCACCTGAG
CTCCAGCCGCCCACAAACTGCTGCATGAGTGGCTGCCCCAACTGCGTGTGGGTGGAGTACGCGG
ACAGGCTGCTGCAGCACTTCCAGGACGGTGGGGAGCGGGCCCTGGCTGCCCTGGAGGAGCACGT
GGCTGATGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTGCACACCAGGTGCGGAGGC
TGAGCCATCCCTGCTGGACTCCCTACCGCAGGACGGAGTCCAGGACGCAGCCGCAGCCTCCTTC
CTTCACACCCCCTCACAGACTCCTTGTGTCCAACGGGAATAGGAAGAATTAGTTACTGACTTCA
CCTGAGAAAAAAATAAATTCTCTATGGTGGTTTCACAGGA

hide sequence

RefSeq Acc Id:

NR_130937

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
CHM1_1	17	79,718,287 - 79,719,888 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGCAAGTACCAGGACGGGTCTTGGCAGCGCCGAAGGGCACG
TCCGAGAGGCCGCTGTCCGGGGGCCCGCACGTACCGGGAGGAGCCCCGGCCCCTCCACCCGCAT
GTGGGGACGGAGCCGGGAGGATCGCGCGCTGGCCGCCGCCGAAGGACCCCTCGCTCCTCTCCTC
CATCGGCTCTTACCGAGTCCCCGCCCCGGAATCTGTGGAGGGGCCGCTTAGCCTTGGGAGAGGA
AGCAGCCCGGTGAACGGCCACTTTCCTGTTTCTCAGTATCTGCCGAGCGCCTGTGTGCGAGCCC
TCCTGGGCTCTGGGGACTGGCCGTGGACATGGAGCGGATGATGCCCCTCGCAGGACTAGTTAAA
TAAGTGAAGGGGCTCGCCGGTTCTCCAGCCCGGACTGCTGCCAGAGGCTTCCTGGAGGTGGCAG
CTTTCTTCAAAGGCACCATCCCGGAGCGCAAGCCCCTGATGGGCGCAGAAAATTCGGGACAGAC
CACGTAGAGGTGGGCTCCCAAGCAGGTGCGGACGGCACCAGGCCGCCCAAGGCATCGCTGCCAC
CTGAGCTCCAGCCGCCCACAAACTGCTGCATGAGTGGCTGCCCCAACTGCGTGTGGGTGGAGTA
CGCGGACAGGCTGCTGCAGCACTTCCAGGACGGTGGGGAGCGGGCCCTGGCTGCCCTGGAGGAG
CACGTGGCTGATGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTGCACACCAGGTGCG
GAGGCTGAGCCATCCCTGCTGGACTCCCTACCGCAGGACGGAGTCCAGGACGCAGCCGCAGCCT
CCTTCCTTCACACCCCCTCACAGACTCCTTGTGTCCAACGGGAATAGGAAGAATTAGTTACTGA
CTTCACCTGAGAAAAAAATAAATTCTCTATGGTGGTTTCACAGGA

hide sequence

RefSeq Acc Id:

NR_130938

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
CHM1_1	17	79,718,287 - 79,719,888 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGCAAGTACCAGGACGGGTCTTGGCAGCGCCGAAGGGCACG
TCCGAGAGGCCGCTGTCCGGGGGCCCGCACGTACCGGGAGGAGCCCCGGCCCCTCCACCCGCAT
GTGGGGACGGAGCCGGGAGGATCGCGCGCTGGCCGCCGCCGAAGGACCCCTCGCTCCTCTCCTC
CATCGGCTCTTACCGAGTCCCCGCCCCGGAATCTGTGGAGGGGCCGCTTAGCCTTGGGAGAGGA
AGCAGCCCGGTGAACGGCCACTTTCCTGTTTCTCAGTATCTGCCGAGCGCCTGTGTGCGAGCCC
TCCTGGGCTCTGGGGACTGGCCGTGGACATGGAGCGGATGATGCCCCTCGCAGGACTAGTTAAA
TAAGTGAAGTTGGGGGCTCGCCGGTTCTCCAGCCCGGACTGCTGCCAGAGGCTTCCTGGAGGTG
GCAGCTTTCTTCAAAGGCACCATCCCGGAGCGCAAGCCCCTGATGGGCGCAGAAAATTCGGGAC
AGACCACGTAGAGGTGGGCTCCCAAGCAGGTGCGGACGGCACCAGGCCGCCCAAGGCATCGCTG
CCACCTGAGCTCCAGCCGCCCACAAACTGCTGCATGAGTGGCTGCCCCAACTGCGTGTGGGTGG
AGTACGCGGACAGGCTGCTGCAGCACTTCCAGGACGGTGGGGAGCGGGCCCTGGCTGCCCTGGA
GGAGCACGTGGCTGATGAGAACCTCAAGGCCTTCCTCAGGATGGAGATCCGGCTGCACACCAGG
TGCGGAGGCTGAGCCATCCCTGCTGGACTCCCTACCGCAGGACGGAGTCCAGGACGCAGCCGCA
GCCTCCTTCCTTCACACCCCCTCACAGACTCCTTGTGTCCAACGGGAATAGGAAGAATTAGTTA
CTGACTTCACCTGAGAAAAAAATAAATTCTCTATGGTGGTTTCACAGGA

hide sequence

RefSeq Acc Id:

NR_130939

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,665,036 - 81,666,605 (-)	NCBI
CHM1_1	17	79,718,287 - 79,719,397 (-)	NCBI
T2T-CHM13v2.0	17	82,581,948 - 82,583,517 (-)	NCBI

Sequence:

show sequence

AGGGGTTGCCGGATCCCGTCCGCGGGCGATGCTGCTGCGGAGGGTGGTCGAGGGAGGCCGGGCG
GTAGCCGCCGCGGTCCGTGGCTCGGCAAGTACCAGGACGGGTCTTGGCAGCGCCGAAGGGCACG
TCCGAGAGGCCGCTGTCCGGGGGCCCGCACGTACCGGGAGGAGCCCCGGCCCCTCCACCCGCAT
GTGGGGACGGAGCCGGGAGGATCGCGCGCTGGCCGCCGCCGAAGGACCCCTCGCTCCTCTCCTC
CATCGGCTCTTACCGAGTCCCCGCCCCGGAATCTGTGGAGGGGCCGCTTAGCCTTGGGAGAGGA
AGCAGCCCGGTGAACGGCCACTTTCCTGTTTCTCAGTATCTGCCGAGCGCCTGTGTGCGAGCCC
TCCTGGGCTCTGGGGACTGGCCGTGGACATGGAGCGGATGATGCCCCTCGCAGGACTAGTTAAA
TAAGTGAAGTTGGTAGCGTGTCAGTCCGTGATCCTGGGTAGATAGAGCAGGGCAGCGACGGAAG
ACTGCCTATAGGACATTCACGCTGGGATGAGAGGGGCCTGAGAGGCCTGGGCTTTGTGACAGGG
AAACTTGGATAAAGGGTGGTGCGATTCTTCCGGGGGCTCGCCGGTTCTCCAGCCCGGACTGCTG
CCAGAGGCTTCCTGGAGGTGGCAGCTTTCTTCAAAGGCACCATCCCGGAGCGCAAGCCCCTGAT
GGGCGCAGAAAATTCGGGACAGACCACGTAGAGGTGGGCTCCCAAGCAGGTGCGGACGGCACCA
GGCCGCCCAAGGCATCGCTGCCACCTGAGCTCCAGCCGCCCACAAACTGCTGCATGAGTGGCTG
CCCCAACTGCGTGTGGGTGGAGTACGCGGACAGGCTGCTGCAGCACTTCCAGGACGGTGGGGAG
CGGGCCCTGGCTGCCCTGGAGGAGCACGTGGCTGATGAGAACCTCAAGGCCTTCCTCAGGATGG
AGATCCGGCTGCACACCAGGTGCGGAGGCTGAGCCATCCCTGCTGGACTCCCTACCGCAGGACG
GAGTCCAGGACGCAGCCGCAGCCTCCTTCCTTCACACCCCCTCACAGACTCCTTGTGTCCAACG
GGAATAGGAAGAATTAGTTACTGACTTCACCTGAGAAAAAAATAAATTCTCTATGGTGGTTTCA
CAGGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001034931	(Get FASTA)	NCBI Sequence Viewer
	NP_001291923	(Get FASTA)	NCBI Sequence Viewer
	NP_001291924	(Get FASTA)	NCBI Sequence Viewer
	NP_001291928	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH90923	(Get FASTA)	NCBI Sequence Viewer
	EAW89667	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000363873
	ENSP00000363873.3
	ENSP00000459191.1
	ENSP00000459281.1
	ENSP00000459374.1
	ENSP00000466256
	ENSP00000466256.1
GenBank Protein	Q5BKU9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001034931 ⟸ NM_001039842
- Peptide Label:	isoform a
- UniProtKB:	A6ND24 (UniProtKB/Swiss-Prot), Q5BKU9 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MLLRRVVEGGRAVAAAVRGSGARRFSSPDCCQRLPGGGSFLQRHHPGAQAPDGRRKFGTDHVEV GSQAGADGTRPPKASLPPELQPPTNCCMSGCPNCVWVEYADRLLQHFQDGGERALAALEEHVAD ENLKAFLRMEIRLHTRCGG hide sequence

RefSeq Acc Id:	NP_001291924 ⟸ NM_001304995
- Peptide Label:	isoform c
- UniProtKB:	I3L208 (UniProtKB/TrEMBL), I3L247 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLRRVVEGGRAVAAAVRGSASTRTGLGSAEGHVREAAVRGPARTGRSPGPSTRMWGRSREDRA LAAAEGPLAPLLHRLLPSPRPGICGGAA hide sequence

RefSeq Acc Id:	NP_001291923 ⟸ NM_001304994
- Peptide Label:	isoform b
- Sequence:	show sequence MERMMPLAGLGARRFSSPDCCQRLPGGGSFLQRHHPGAQAPDGRRKFGTDHVEVGSQAGADGTR PPKASLPPELQPPTNCCMSGCPNCVWVEYADRLLQHFQDGGERALAALEEHVADENLKAFLRME IRLHTRCGG hide sequence

RefSeq Acc Id:	NP_001291928 ⟸ NM_001304999
- Peptide Label:	isoform c
- UniProtKB:	I3L208 (UniProtKB/TrEMBL), I3L247 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLRRVVEGGRAVAAAVRGSASTRTGLGSAEGHVREAAVRGPARTGRSPGPSTRMWGRSREDRA LAAAEGPLAPLLHRLLPSPRPGICGGAA hide sequence

RefSeq Acc Id:

ENSP00000363873 ⟸ ENST00000374741

RefSeq Acc Id:

ENSP00000459281 ⟸ ENST00000571092

RefSeq Acc Id:

ENSP00000466256 ⟸ ENST00000571503

RefSeq Acc Id:

ENSP00000459191 ⟸ ENST00000571757

RefSeq Acc Id:

ENSP00000459374 ⟸ ENST00000575992

Protein Domains

Oxidoreductase-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5BKU9-F1-model_v2	AlphaFold	Q5BKU9	1-147	view protein structure

Promoters

RGD ID:

6793828

Promoter ID:

HG_KWN:27371

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

NM_001039842, NM_199287, UC002KBB.2, UC002KBD.2

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	17	77,241,746 - 77,244,212 (-)	MPROMDB

RGD ID:

7236631

Promoter ID:

EPDNEW_H24061

Type:

initiation region

Name:

OXLD1_1

Description:

oxidoreductase like domain containing 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H24062

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,666,588 - 81,666,648	EPDNEW

RGD ID:

7236635

Promoter ID:

EPDNEW_H24062

Type:

initiation region

Name:

OXLD1_2

Description:

oxidoreductase like domain containing 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H24061

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	17	81,666,691 - 81,666,751	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:27901	AgrOrtholog
COSMIC	OXLD1	COSMIC
Ensembl Genes	ENSG00000204237	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENST00000374741	ENTREZGENE
	ENST00000374741.4	UniProtKB/Swiss-Prot
	ENST00000571092.1	UniProtKB/TrEMBL
	ENST00000571503	ENTREZGENE
	ENST00000571503.1	UniProtKB/TrEMBL
	ENST00000571757.1	UniProtKB/TrEMBL
	ENST00000575963	ENTREZGENE
	ENST00000575992.1	UniProtKB/TrEMBL
GTEx	ENSG00000204237	GTEx
HGNC ID	HGNC:27901	ENTREZGENE
Human Proteome Map	OXLD1	Human Proteome Map
InterPro	Oxidoreductase-like_N	UniProtKB/Swiss-Prot
	OXLD1	UniProtKB/Swiss-Prot
KEGG Report	hsa:339229	UniProtKB/Swiss-Prot
NCBI Gene	339229	ENTREZGENE
PANTHER	OXIDOREDUCTASE-LIKE DOMAIN-CONTAINING PROTEIN 1	UniProtKB/Swiss-Prot
	PTHR21193	UniProtKB/Swiss-Prot
Pfam	Oxidored-like	UniProtKB/Swiss-Prot
PharmGKB	PA162378543	PharmGKB
UniProt	A6ND24	ENTREZGENE
	I3L208	ENTREZGENE, UniProtKB/TrEMBL
	I3L247	ENTREZGENE, UniProtKB/TrEMBL
	OXLD1_HUMAN	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	A6ND24	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-04-12	OXLD1	oxidoreductase like domain containing 1		oxidoreductase-like domain containing 1	Symbol and/or name change	5135510	APPROVED
2012-07-24	OXLD1	oxidoreductase-like domain containing 1	C17orf90	chromosome 17 open reading frame 90	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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