Mpv17 (mitochondrial inner membrane protein MPV17) - Rat Genome Database

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Gene: Mpv17 (mitochondrial inner membrane protein MPV17) Heterocephalus glaber
Analyze
Symbol: Mpv17
Name: mitochondrial inner membrane protein MPV17
RGD ID: 18932432
Description: ENCODES a protein that exhibits channel activity (ortholog); INVOLVED IN glomerular basement membrane development (ortholog); homeostatic process (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal recessive Alport syndrome (ortholog); Charcot-Marie-Tooth disease type 2EE (ortholog); cochlear disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); peroxisome (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: MPV17, mitochondrial inner membrane protein; protein Mpv17
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247389,395,416 - 9,407,223 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247389,395,315 - 9,411,904 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mpv17
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247389,395,416 - 9,407,223 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247389,395,315 - 9,411,904 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MPV17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38227,309,492 - 27,323,097 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl227,309,492 - 27,325,680 (-)EnsemblGRCh38hg38GRCh38
GRCh37227,532,360 - 27,545,964 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36227,385,864 - 27,399,473 (-)NCBINCBI36Build 36hg18NCBI36
Build 34227,444,012 - 27,457,082NCBI
Celera227,379,464 - 27,393,076 (-)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef227,274,582 - 27,288,152 (-)NCBIHuRef
CHM1_1227,462,306 - 27,475,919 (-)NCBICHM1_1
T2T-CHM13v2.0227,351,915 - 27,365,520 (-)NCBIT2T-CHM13v2.0
Mpv17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39531,298,007 - 31,311,595 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl531,297,998 - 31,311,595 (-)EnsemblGRCm39 Ensembl
GRCm38531,140,663 - 31,154,251 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl531,140,654 - 31,154,251 (-)EnsemblGRCm38mm10GRCm38
MGSCv37531,443,033 - 31,456,615 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36531,417,529 - 31,430,812 (-)NCBIMGSCv36mm8
Celera528,619,571 - 28,633,245 (-)NCBICelera
Cytogenetic Map5B1NCBI
cM Map517.12NCBI
Mpv17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8630,941,693 - 30,956,389 (+)NCBIGRCr8
mRatBN7.2625,221,668 - 25,236,241 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,222,896 - 25,236,244 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,523,972 - 25,537,065 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0625,839,865 - 25,852,958 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,318,528 - 25,331,843 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0626,585,713 - 26,600,265 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,587,443 - 26,599,511 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,403,896 - 36,416,645 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,200,452 - 25,214,909 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1101,655,564 - 1,672,677 (+)NCBI
Celera624,714,225 - 24,727,365 (+)NCBICelera
Cytogenetic Map6q14NCBI
Mpv17
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554699,279,540 - 9,291,954 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554699,279,540 - 9,292,012 (-)NCBIChiLan1.0ChiLan1.0
MPV17
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21299,189,334 - 99,202,979 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A99,193,303 - 99,206,947 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A27,311,551 - 27,325,249 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A27,399,258 - 27,412,747 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A27,399,258 - 27,414,090 (-)Ensemblpanpan1.1panPan2
MPV17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11721,280,523 - 21,290,967 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1721,281,361 - 21,290,339 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1721,172,324 - 21,182,712 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01721,601,802 - 21,612,194 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1721,601,804 - 21,612,150 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11721,288,497 - 21,298,885 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01721,297,995 - 21,308,610 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01721,346,222 - 21,356,615 (-)NCBIUU_Cfam_GSD_1.0
Mpv17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629265,580,429 - 65,593,085 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364935,248,059 - 5,258,147 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364935,246,803 - 5,258,147 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPV17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3111,821,690 - 111,833,928 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13111,823,075 - 111,833,929 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MPV17
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11480,289,285 - 80,302,838 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604531,849,129 - 31,863,229 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000010182   ⟹   ENSHGLP00000010070
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247389,395,416 - 9,407,223 (-)Ensembl
RefSeq Acc Id: ENSHGLT00000010183   ⟹   ENSHGLP00000010071
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247389,395,854 - 9,406,711 (-)Ensembl
RefSeq Acc Id: XM_004839188   ⟹   XP_004839245
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247389,395,315 - 9,407,246 (-)NCBI
RefSeq Acc Id: XM_004839189   ⟹   XP_004839246
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247389,395,315 - 9,404,360 (-)NCBI
RefSeq Acc Id: XM_021253624   ⟹   XP_021109283
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247389,395,315 - 9,411,904 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004839245 (Get FASTA)   NCBI Sequence Viewer  
  XP_004839246 (Get FASTA)   NCBI Sequence Viewer  
  XP_021109283 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000010070
GenBank Protein JAO00324 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021109283   ⟸   XM_021253624
- Peptide Label: isoform X1
- UniProtKB: G5BZ03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004839245   ⟸   XM_004839188
- Peptide Label: isoform X1
- UniProtKB: G5BZ03 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004839246   ⟸   XM_004839189
- Peptide Label: isoform X2
RefSeq Acc Id: ENSHGLP00000010071   ⟸   ENSHGLT00000010183
RefSeq Acc Id: ENSHGLP00000010070   ⟸   ENSHGLT00000010182


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000007226 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000010182 ENTREZGENE
InterPro Mpv17_PMP22 UniProtKB/TrEMBL
NCBI Gene Mpv17 ENTREZGENE
PANTHER PROTEIN MPV17 UniProtKB/TrEMBL
  PTHR11266 UniProtKB/TrEMBL
Pfam Mpv17_PMP22 UniProtKB/TrEMBL
UniProt A0A0P6J9J5_HETGA UniProtKB/TrEMBL
  G5BZ03 ENTREZGENE, UniProtKB/TrEMBL