Megf9 (multiple EGF like domains 9) - Rat Genome Database

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Gene: Megf9 (multiple EGF like domains 9) Heterocephalus glaber
Analyze
Symbol: Megf9
Name: multiple EGF like domains 9
RGD ID: 18932408
Description: ASSOCIATED WITH genetic disease (ortholog); FOUND IN basement membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Multiple epidermal growth factor-like domains 9; multiple epidermal growth factor-like domains protein 9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476014,629,985 - 14,723,546 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476014,629,989 - 14,721,655 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Megf9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476014,629,985 - 14,723,546 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476014,629,989 - 14,721,655 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MEGF9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389120,600,811 - 120,714,470 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9120,600,811 - 120,714,470 (-)EnsemblGRCh38hg38GRCh38
GRCh379123,363,089 - 123,476,748 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369122,402,912 - 122,516,433 (-)NCBINCBI36Build 36hg18NCBI36
Build 349120,442,644 - 120,501,329NCBI
Celera994,011,363 - 94,124,882 (-)NCBICelera
Cytogenetic Map9q33.2NCBI
HuRef992,980,942 - 93,106,705 (-)NCBIHuRef
CHM1_19123,510,375 - 123,623,915 (-)NCBICHM1_1
T2T-CHM13v2.09132,795,136 - 132,910,624 (-)NCBIT2T-CHM13v2.0
Megf9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39470,350,164 - 70,453,165 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl470,345,302 - 70,453,232 (-)EnsemblGRCm39 Ensembl
GRCm38470,431,927 - 70,534,928 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl470,427,065 - 70,534,995 (-)EnsemblGRCm38mm10GRCm38
MGSCv37470,092,961 - 70,195,962 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36469,918,288 - 70,021,289 (-)NCBIMGSCv36mm8
Celera469,026,247 - 69,125,899 (-)NCBICelera
Cytogenetic Map4C2NCBI
cM Map435.92NCBI
Megf9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8589,008,679 - 89,120,731 (-)NCBIGRCr8
mRatBN7.2583,993,565 - 84,105,622 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl583,993,565 - 84,105,622 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx586,384,336 - 86,496,433 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0588,201,662 - 88,313,760 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0588,177,337 - 88,289,435 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0586,586,996 - 86,696,388 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl586,586,996 - 86,696,388 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0590,674,194 - 90,783,779 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4587,771,841 - 87,884,885 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1587,835,304 - 87,889,914 (-)NCBI
Celera582,798,300 - 82,909,288 (-)NCBICelera
Cytogenetic Map5q31NCBI
Megf9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554197,303,346 - 7,395,493 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554197,303,248 - 7,399,796 (+)NCBIChiLan1.0ChiLan1.0
MEGF9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21118,631,309 - 18,745,186 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1918,633,656 - 18,747,648 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0991,728,219 - 91,842,056 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19120,076,181 - 120,189,364 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9120,076,181 - 120,189,364 (-)Ensemblpanpan1.1panPan2
MEGF9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11173,716,395 - 73,793,072 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1172,129,733 - 72,206,838 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01174,849,424 - 74,927,568 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11173,361,703 - 73,440,223 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01173,393,710 - 73,470,845 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01174,130,763 - 74,208,829 (-)NCBIUU_Cfam_GSD_1.0
Megf9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947189,327,446 - 189,428,986 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049364879,095,979 - 9,203,768 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEGF9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,661,420 - 260,756,866 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,662,355 - 260,756,930 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21292,733,710 - 292,827,868 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MEGF9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11218,866,228 - 18,976,522 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1218,866,185 - 18,974,909 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603524,028,779 - 24,146,286 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000020351   ⟹   ENSHGLP00000020150
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476014,629,985 - 14,723,546 (+)Ensembl
RefSeq Acc Id: XM_004849471   ⟹   XP_004849528
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476014,629,989 - 14,721,655 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004849528 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB08708 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000020150
Reference Protein Sequences
RefSeq Acc Id: XP_004849528   ⟸   XM_004849471
RefSeq Acc Id: ENSHGLP00000020150   ⟸   ENSHGLT00000020351


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000014426 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000020351 ENTREZGENE
NCBI Gene Megf9 ENTREZGENE