Il27ra (interleukin 27 receptor subunit alpha) - Rat Genome Database

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Gene: Il27ra (interleukin 27 receptor subunit alpha) Heterocephalus glaber
Analyze
Symbol: Il27ra
Name: interleukin 27 receptor subunit alpha
RGD ID: 18932373
Description: ENCODES a protein that exhibits interleukin-27 receptor activity (inferred); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cellular extravasation (ortholog); negative regulation of interleukin-17 production (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); genetic disease (ortholog); pneumoconiosis (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin-27 receptor subunit alpha
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249011,274,840 - 1,287,861 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249011,274,753 - 1,288,783 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
Il27ra
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249011,274,840 - 1,287,861 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249011,274,753 - 1,288,783 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
IL27RA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381914,031,762 - 14,053,218 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1914,031,762 - 14,053,218 (+)EnsemblGRCh38hg38GRCh38
GRCh371914,142,574 - 14,164,030 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,003,262 - 14,025,026 (+)NCBINCBI36Build 36hg18NCBI36
Build 341914,003,261 - 14,025,026NCBI
Celera1914,036,058 - 14,057,825 (+)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1913,714,538 - 13,735,786 (+)NCBIHuRef
CHM1_11914,143,096 - 14,164,322 (+)NCBICHM1_1
T2T-CHM13v2.01914,158,051 - 14,179,508 (+)NCBIT2T-CHM13v2.0
Il27ra
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,756,915 - 84,769,250 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl884,756,923 - 84,769,218 (-)EnsemblGRCm39 Ensembl
GRCm38884,030,286 - 84,042,600 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,030,294 - 84,042,589 (-)EnsemblGRCm38mm10GRCm38
MGSCv37886,554,185 - 86,566,474 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36886,920,423 - 86,932,680 (-)NCBIMGSCv36mm8
Celera888,323,361 - 88,337,096 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.26NCBI
Il27ra
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81941,014,730 - 41,026,740 (+)NCBIGRCr8
mRatBN7.21924,109,963 - 24,121,977 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1924,109,972 - 24,121,938 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1930,931,218 - 30,943,116 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01931,585,624 - 31,597,522 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01933,808,352 - 33,820,238 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01925,151,835 - 25,163,995 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1925,149,897 - 25,164,086 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01936,128,834 - 36,140,875 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41925,795,355 - 25,807,317 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11925,802,500 - 25,806,104 (+)NCBI
Celera1923,657,895 - 23,669,746 (+)NCBICelera
Cytogenetic Map19q11NCBI
Il27ra
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541532,749,094 - 32,761,882 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541532,749,682 - 32,762,532 (+)NCBIChiLan1.0ChiLan1.0
IL27RA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22018,960,949 - 18,982,615 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11917,961,963 - 17,983,593 (+)NCBINHGRI_mPanPan1
PanPan1.11914,323,618 - 14,343,636 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,323,618 - 14,343,627 (+)Ensemblpanpan1.1panPan2
IL27RA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12048,456,766 - 48,475,414 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2048,457,134 - 48,472,450 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2048,330,953 - 48,346,665 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02048,974,444 - 48,990,172 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2048,974,445 - 48,990,429 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12048,185,368 - 48,201,224 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,612,194 - 48,627,913 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02048,854,767 - 48,870,725 (-)NCBIUU_Cfam_GSD_1.0
Il27ra
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,634,220 - 207,649,537 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366592,705,985 - 2,722,748 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366592,706,037 - 2,720,486 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL27RA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl265,127,287 - 65,149,740 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1265,127,278 - 65,149,665 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,401,420 - 65,423,808 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL27RA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1612,679,270 - 12,699,254 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl612,686,838 - 12,701,867 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660746,950,555 - 6,971,183 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000012023   ⟹   ENSHGLP00000011893
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046249011,274,840 - 1,287,861 (+)Ensembl
RefSeq Acc Id: XM_004872542   ⟹   XP_004872599
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249011,274,762 - 1,288,783 (+)NCBI
RefSeq Acc Id: XM_021250445   ⟹   XP_021106104
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249011,274,757 - 1,288,783 (+)NCBI
RefSeq Acc Id: XM_021250446   ⟹   XP_021106105
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249011,274,758 - 1,288,783 (+)NCBI
RefSeq Acc Id: XM_021250447   ⟹   XP_021106106
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249011,274,755 - 1,288,783 (+)NCBI
RefSeq Acc Id: XM_021250449   ⟹   XP_021106108
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249011,274,755 - 1,288,783 (+)NCBI
RefSeq Acc Id: XM_021250450   ⟹   XP_021106109
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249011,274,753 - 1,288,783 (+)NCBI
RefSeq Acc Id: XM_021250451   ⟹   XP_021106110
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046249011,275,358 - 1,288,783 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_021106109   ⟸   XM_021250450
- Peptide Label: isoform X6
- UniProtKB: G5BYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106106   ⟸   XM_021250447
- Peptide Label: isoform X3
- UniProtKB: G5BYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106108   ⟸   XM_021250449
- Peptide Label: isoform X4
- UniProtKB: G5BYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106104   ⟸   XM_021250445
- Peptide Label: isoform X1
- UniProtKB: G5BYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106105   ⟸   XM_021250446
- Peptide Label: isoform X2
- UniProtKB: G5BYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004872599   ⟸   XM_004872542
- Peptide Label: isoform X5
- UniProtKB: G5BYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021106110   ⟸   XM_021250451
- Peptide Label: isoform X7
- UniProtKB: G5BYT9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000011893   ⟸   ENSHGLT00000012023


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008513 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000012023 ENTREZGENE
Gene3D-CATH Immunoglobulins UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
NCBI Gene Il27ra ENTREZGENE
PANTHER INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
  INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
Pfam fn3 UniProtKB/TrEMBL
PROSITE FN3 UniProtKB/TrEMBL
Superfamily-SCOP Fibronectin type III UniProtKB/TrEMBL
UniProt G5BYT9 ENTREZGENE, UniProtKB/TrEMBL