Rdh14 (retinol dehydrogenase 14) - Rat Genome Database

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Gene: Rdh14 (retinol dehydrogenase 14) Heterocephalus glaber
Analyze
Symbol: Rdh14
Name: retinol dehydrogenase 14
RGD ID: 18932199
Description: ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); steroid dehydrogenase activity (ortholog); INVOLVED IN retinol metabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247381,393,157 - 1,397,587 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Rdh14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247381,393,157 - 1,397,587 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
RDH14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38218,554,723 - 18,560,653 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl218,554,723 - 18,560,679 (-)EnsemblGRCh38hg38GRCh38
GRCh37218,735,989 - 18,741,919 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36218,599,473 - 18,605,381 (-)NCBINCBI36Build 36hg18NCBI36
Build 34218,657,624 - 18,663,520NCBI
Celera218,617,249 - 18,623,222 (-)NCBICelera
Cytogenetic Map2p24.2NCBI
HuRef218,511,154 - 18,517,127 (-)NCBIHuRef
CHM1_1218,665,393 - 18,671,366 (-)NCBICHM1_1
T2T-CHM13v2.0218,586,834 - 18,592,767 (-)NCBIT2T-CHM13v2.0
Rdh14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391210,440,752 - 10,445,562 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1210,440,772 - 10,445,562 (+)EnsemblGRCm39 Ensembl
GRCm381210,390,748 - 10,395,562 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1210,390,772 - 10,395,562 (+)EnsemblGRCm38mm10GRCm38
MGSCv371210,397,586 - 10,402,368 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361210,416,788 - 10,421,569 (+)NCBIMGSCv36mm8
Celera1210,767,241 - 10,772,010 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map125.29NCBI
Rdh14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8638,875,693 - 38,880,836 (+)NCBIGRCr8
mRatBN7.2633,156,569 - 33,161,712 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl633,156,569 - 33,161,712 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx633,449,459 - 33,454,605 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0633,765,372 - 33,770,518 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0633,237,152 - 33,242,297 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0636,106,926 - 36,112,069 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl636,107,147 - 36,112,064 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0645,868,730 - 45,873,873 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4633,867,711 - 33,872,853 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera632,593,617 - 32,598,763 (+)NCBICelera
Cytogenetic Map6q14NCBI
Rdh14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554691,281,791 - 1,286,147 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554691,281,391 - 1,287,334 (-)NCBIChiLan1.0ChiLan1.0
RDH14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212107,969,873 - 107,975,830 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A107,973,836 - 107,979,804 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A18,534,357 - 18,540,325 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A18,661,815 - 18,667,359 (-)NCBIpanpan1.1PanPan1.1panPan2
RDH14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11713,843,278 - 13,848,498 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1713,795,101 - 13,800,302 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01713,986,784 - 13,991,984 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1713,986,775 - 13,992,058 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11713,843,170 - 13,848,363 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01713,848,691 - 13,853,892 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01713,882,462 - 13,887,659 (-)NCBIUU_Cfam_GSD_1.0
Rdh14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629258,292,202 - 58,297,536 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649312,542,144 - 12,546,977 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
RDH14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3119,453,995 - 119,458,778 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13119,453,986 - 119,458,787 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23127,542,600 - 127,547,399 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RDH14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11489,128,850 - 89,134,879 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1489,128,828 - 89,135,033 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604523,096,213 - 23,102,239 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004839034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01015423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_004839034   ⟹   XP_004839091
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247381,393,157 - 1,397,587 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004839091 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000018294
Reference Protein Sequences
RefSeq Acc Id: XP_004839091   ⟸   XM_004839034


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000013103 ENTREZGENE
Ensembl Transcript ENSHGLT00000018478 ENTREZGENE
NCBI Gene Rdh14 ENTREZGENE