Kat6a (lysine acetyltransferase 6A) - Rat Genome Database

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Gene: Kat6a (lysine acetyltransferase 6A) Heterocephalus glaber
Analyze
Symbol: Kat6a
Name: lysine acetyltransferase 6A
RGD ID: 18930960
Description: ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone H3K14 acetyltransferase activity (ortholog); INVOLVED IN aorta morphogenesis (ortholog); cellular senescence (ortholog); embryonic hemopoiesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Arboleda-Tham syndrome (ortholog); FOUND IN cytosol (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nuclear speck (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: histone acetyltransferase KAT6A; Histone acetyltransferase MYST3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247801,240,292 - 1,376,072 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247801,237,326 - 1,378,718 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Kat6a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247801,240,292 - 1,376,072 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247801,237,326 - 1,378,718 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
KAT6A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38841,929,479 - 42,051,987 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl841,929,479 - 42,051,994 (-)EnsemblGRCh38hg38GRCh38
GRCh37841,786,997 - 41,909,505 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36841,906,154 - 42,028,662 (-)NCBINCBI36Build 36hg18NCBI36
Build 34841,907,425 - 42,028,635NCBI
Celera840,736,067 - 40,858,643 (-)NCBICelera
Cytogenetic Map8p11.21NCBI
HuRef840,314,984 - 40,434,974 (-)NCBIHuRef
CHM1_1841,835,431 - 41,957,801 (-)NCBICHM1_1
T2T-CHM13v2.0842,203,787 - 42,326,296 (-)NCBIT2T-CHM13v2.0
Kat6a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,349,458 - 23,433,275 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl823,349,551 - 23,433,275 (+)EnsemblGRCm39 Ensembl
GRCm38822,859,442 - 22,943,259 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl822,859,535 - 22,943,259 (+)EnsemblGRCm38mm10GRCm38
MGSCv37823,970,011 - 24,053,734 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36824,325,080 - 24,408,807 (+)NCBIMGSCv36mm8
Celera824,351,439 - 24,433,561 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map811.42NCBI
Kat6a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81675,787,411 - 75,868,584 (-)NCBIGRCr8
mRatBN7.21669,084,914 - 69,165,923 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1669,084,914 - 69,163,606 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1674,358,565 - 74,437,271 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01677,790,634 - 77,869,724 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01673,039,779 - 73,118,865 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01673,942,669 - 74,020,750 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1673,943,455 - 74,023,005 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,575,194 - 73,655,378 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,553,868 - 73,634,794 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11673,556,791 - 73,632,511 (-)NCBI
Celera1666,978,642 - 67,057,326 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
Kat6a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955536900,198 - 1,015,520 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955536900,198 - 1,015,520 (+)NCBIChiLan1.0ChiLan1.0
KAT6A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2760,382,028 - 60,506,436 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1836,099,345 - 36,222,083 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0841,173,833 - 41,296,547 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1838,622,419 - 38,742,273 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl838,625,156 - 38,741,538 (-)Ensemblpanpan1.1panPan2
KAT6A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11623,604,629 - 23,717,047 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1623,604,200 - 23,724,252 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1624,108,113 - 24,221,865 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01625,351,804 - 25,466,743 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1625,351,846 - 25,464,076 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11623,722,919 - 23,836,884 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01624,284,506 - 24,398,604 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01624,335,164 - 24,449,218 (+)NCBIUU_Cfam_GSD_1.0
Kat6a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494346,646,353 - 46,748,108 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936785603,478 - 701,791 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936785602,754 - 704,504 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KAT6A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11711,002,818 - 11,109,974 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21712,485,672 - 12,536,507 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KAT6A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1839,912,120 - 40,035,776 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl839,911,776 - 39,962,735 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660521,751,940 - 1,875,909 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000005500   ⟹   ENSHGLP00000005429
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247801,240,292 - 1,376,072 (+)Ensembl
RefSeq Acc Id: XM_004855288   ⟹   XP_004855345
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247801,237,338 - 1,378,718 (+)NCBI
RefSeq Acc Id: XM_004855289   ⟹   XP_004855346
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247801,237,338 - 1,378,718 (+)NCBI
RefSeq Acc Id: XM_004855290   ⟹   XP_004855347
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247801,237,326 - 1,378,718 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004855345 (Get FASTA)   NCBI Sequence Viewer  
  XP_004855346 (Get FASTA)   NCBI Sequence Viewer  
  XP_004855347 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB10501 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000005429
Reference Protein Sequences
RefSeq Acc Id: XP_004855347   ⟸   XM_004855290
- UniProtKB: G5BMJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004855346   ⟸   XM_004855289
- UniProtKB: G5BMJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004855345   ⟸   XM_004855288
- UniProtKB: G5BMJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000005429   ⟸   ENSHGLT00000005500


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000003976 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000005500 ENTREZGENE
Gene3D-CATH 3.40.630.30 UniProtKB/TrEMBL
  N-acetyl transferase-like UniProtKB/TrEMBL
  Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain UniProtKB/TrEMBL
  Zinc/RING finger domain, C3HC4 (zinc finger) UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  HAT_MYST-type UniProtKB/TrEMBL
  Histone_H1/H5_H15 UniProtKB/TrEMBL
  SAMD1-like_WH UniProtKB/TrEMBL
  WH-like_DNA-bd_sf UniProtKB/TrEMBL
  WH_DNA-bd_sf UniProtKB/TrEMBL
  Zf-MYST UniProtKB/TrEMBL
  Znf_FYVE_PHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_PHD-finger UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene Kat6a ENTREZGENE
PANTHER HISTONE ACETYLTRANSFERASE UniProtKB/TrEMBL
  HISTONE ACETYLTRANSFERASE KAT6A UniProtKB/TrEMBL
Pfam MOZ_SAS UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
  SAMD1_WH UniProtKB/TrEMBL
  zf-MYST UniProtKB/TrEMBL
PROSITE H15 UniProtKB/TrEMBL
  MYST_HAT UniProtKB/TrEMBL
  ZF_PHD_2 UniProtKB/TrEMBL
SMART H15 UniProtKB/TrEMBL
  PHD UniProtKB/TrEMBL
Superfamily-SCOP Acyl-CoA N-acyltransferases (Nat) UniProtKB/TrEMBL
  FYVE/PHD zinc finger UniProtKB/TrEMBL
  Winged helix' DNA-binding domain UniProtKB/TrEMBL
UniProt G5BMJ0 ENTREZGENE, UniProtKB/TrEMBL