Hjv (hemojuvelin BMP co-receptor) - Rat Genome Database

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Gene: Hjv (hemojuvelin BMP co-receptor) Heterocephalus glaber
Analyze
Symbol: Hjv
Name: hemojuvelin BMP co-receptor
RGD ID: 18913335
Description: ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN basolateral plasma membrane (ortholog); BMP receptor complex (ortholog); cell surface (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: hemochromatosis type 2 (juvenile); hemojuvelin; Hfe2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477217,360,207 - 17,367,373 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477217,363,062 - 17,367,320 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Hjv
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477217,360,207 - 17,367,373 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477217,363,062 - 17,367,320 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
HJV
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381146,017,470 - 146,021,735 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1146,017,468 - 146,036,746 (-)EnsemblGRCh38hg38GRCh38
GRCh371145,413,278 - 145,417,543 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361144,124,635 - 144,128,902 (+)NCBINCBI36Build 36hg18NCBI36
Celera1119,616,475 - 119,620,829 (+)NCBICelera
Cytogenetic Map1q21.1NCBI
HuRef1119,377,356 - 119,381,710 (+)NCBIHuRef
CHM1_11147,385,594 - 147,389,948 (-)NCBICHM1_1
T2T-CHM13v2.01145,134,353 - 145,138,618 (-)NCBIT2T-CHM13v2.0
Hjv
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39396,432,479 - 96,436,532 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl396,432,488 - 96,436,526 (+)EnsemblGRCm39 Ensembl
GRCm38396,525,163 - 96,529,216 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl396,525,172 - 96,529,210 (+)EnsemblGRCm38mm10GRCm38
MGSCv37396,329,108 - 96,333,139 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36396,610,588 - 96,614,616 (+)NCBIMGSCv36mm8
Celera397,932,148 - 97,936,132 (+)NCBICelera
Cytogenetic Map3F2.1NCBI
cM Map341.91NCBI
Hjv
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82186,754,801 - 186,758,708 (+)NCBIGRCr8
mRatBN7.22184,065,944 - 184,069,851 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2184,065,970 - 184,069,850 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2191,737,251 - 191,741,158 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02189,529,998 - 189,533,905 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02184,369,809 - 184,373,716 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02198,655,437 - 198,659,318 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2198,655,437 - 198,659,317 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02218,142,371 - 218,146,252 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42191,329,644 - 191,333,525 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12191,292,397 - 191,296,279 (+)NCBI
Celera2176,591,216 - 176,595,097 (+)NCBICelera
Cytogenetic Map2q34NCBI
Hjv
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495556880,444 - 84,834 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495556880,386 - 84,707 (+)NCBIChiLan1.0ChiLan1.0
HJV
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21103,409,776 - 103,412,640 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11102,998,130 - 103,000,994 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01121,738,465 - 121,742,743 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11113,926,383 - 113,930,761 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1113,926,383 - 113,930,761 (-)Ensemblpanpan1.1panPan2
HJV
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11758,792,647 - 58,797,504 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1758,793,247 - 58,797,373 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1758,260,716 - 58,265,587 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01759,789,615 - 59,794,475 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11758,662,392 - 58,667,230 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01758,723,379 - 58,728,233 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01759,450,061 - 59,454,907 (-)NCBIUU_Cfam_GSD_1.0
Hjv
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505820,866,341 - 20,870,830 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936867742,501 - 746,930 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936867742,539 - 747,035 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HJV
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl499,328,053 - 99,332,645 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1499,327,989 - 99,332,647 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24108,970,829 - 108,975,446 (+)NCBISscrofa10.2Sscrofa10.2susScr3
HJV
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12012,730,106 - 12,735,230 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2012,730,912 - 12,735,255 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603815,407,037 - 15,411,308 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000007874   ⟹   ENSHGLP00000007788
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462477217,360,207 - 17,367,373 (-)Ensembl
RefSeq Acc Id: XM_004853927   ⟹   XP_004853984
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477217,363,062 - 17,367,291 (-)NCBI
RefSeq Acc Id: XM_004853928   ⟹   XP_004853985
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477217,363,062 - 17,367,320 (-)NCBI
RefSeq Acc Id: XM_021265830   ⟹   XP_021121489
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477217,363,062 - 17,367,290 (-)NCBI
RefSeq Acc Id: XM_021265832   ⟹   XP_021121491
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462477217,363,062 - 17,367,291 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004853984 (Get FASTA)   NCBI Sequence Viewer  
  XP_004853985 (Get FASTA)   NCBI Sequence Viewer  
  XP_021121489 (Get FASTA)   NCBI Sequence Viewer  
  XP_021121491 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000007788
Reference Protein Sequences
RefSeq Acc Id: XP_004853985   ⟸   XM_004853928
RefSeq Acc Id: XP_021121491   ⟸   XM_021265832
RefSeq Acc Id: XP_004853984   ⟸   XM_004853927
RefSeq Acc Id: XP_021121489   ⟸   XM_021265830
RefSeq Acc Id: ENSHGLP00000007788   ⟸   ENSHGLT00000007874


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000005651 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000007874 ENTREZGENE
NCBI Gene Hjv ENTREZGENE