Cept1 (choline/ethanolamine phosphotransferase 1) - Rat Genome Database

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Gene: Cept1 (choline/ethanolamine phosphotransferase 1) Heterocephalus glaber
Analyze
Symbol: Cept1
Name: choline/ethanolamine phosphotransferase 1
RGD ID: 18908888
Description: ENCODES a protein that exhibits diacylglycerol cholinephosphotransferase activity (inferred); ethanolaminephosphotransferase activity (inferred); phosphotransferase activity, for other substituted phosphate groups (inferred); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); Golgi apparatus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Choline/ethanolaminephosphotransferase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247726,922,981 - 6,963,250 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247726,922,930 - 6,965,718 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:21993625   PMID:30032202  


Genomics

Comparative Map Data
Cept1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247726,922,981 - 6,963,250 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247726,922,930 - 6,965,718 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CEPT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381111,139,499 - 111,185,104 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1111,139,479 - 111,185,104 (+)EnsemblGRCh38hg38GRCh38
GRCh371111,682,121 - 111,727,726 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361111,483,772 - 111,529,247 (+)NCBINCBI36Build 36hg18NCBI36
Build 341111,394,874 - 111,439,766NCBI
Celera1109,929,250 - 109,974,702 (+)NCBICelera
Cytogenetic Map1p13.3NCBI
HuRef1109,553,819 - 109,599,280 (+)NCBIHuRef
CHM1_11111,797,394 - 111,842,864 (+)NCBICHM1_1
T2T-CHM13v2.01111,154,313 - 111,199,909 (+)NCBIT2T-CHM13v2.0
Cept1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393106,409,576 - 106,455,118 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3106,409,576 - 106,455,118 (-)EnsemblGRCm39 Ensembl
GRCm383106,502,260 - 106,547,802 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3106,502,260 - 106,547,802 (-)EnsemblGRCm38mm10GRCm38
MGSCv373106,305,178 - 106,350,679 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363106,630,316 - 106,675,817 (-)NCBIMGSCv36mm8
Celera3108,834,197 - 108,879,672 (-)NCBICelera
Cytogenetic Map3F2.3NCBI
cM Map346.49NCBI
Cept1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82196,682,455 - 196,724,430 (-)NCBIGRCr8
mRatBN7.22193,994,220 - 194,036,141 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2193,993,447 - 194,035,578 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2201,586,728 - 201,627,840 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02199,492,994 - 199,534,088 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02194,309,952 - 194,351,042 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02209,118,140 - 209,162,071 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2209,118,922 - 209,160,653 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02228,527,799 - 228,569,927 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42201,801,921 - 201,843,259 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12201,764,676 - 201,806,013 (-)NCBI
Celera2186,676,674 - 186,717,806 (-)NCBICelera
Cytogenetic Map2q34NCBI
Cept1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543514,704,269 - 14,743,765 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543514,704,269 - 14,743,765 (+)NCBIChiLan1.0ChiLan1.0
CEPT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21115,858,503 - 115,903,655 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11115,007,386 - 115,052,522 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01113,785,264 - 113,830,648 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11126,516,554 - 126,561,990 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1126,514,879 - 126,561,850 (-)Ensemblpanpan1.1panPan2
CEPT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1640,838,584 - 40,869,606 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl640,839,219 - 40,869,582 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha643,616,675 - 43,654,508 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0641,170,608 - 41,208,479 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl641,170,501 - 41,208,405 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1640,891,866 - 40,929,624 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0640,861,830 - 40,899,641 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0641,297,120 - 41,334,956 (-)NCBIUU_Cfam_GSD_1.0
Cept1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505817,564,126 - 17,601,131 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367042,512,273 - 2,550,135 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367042,513,064 - 2,550,133 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEPT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4109,142,713 - 109,183,324 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14109,142,712 - 109,185,497 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24119,320,247 - 119,552,730 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CEPT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12022,394,045 - 22,434,600 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2022,394,722 - 22,426,512 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603836,042,291 - 36,083,063 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000006442   ⟹   ENSHGLP00000006361
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247726,922,981 - 6,963,250 (+)Ensembl
RefSeq Acc Id: ENSHGLT00000006443   ⟹   ENSHGLP00000006362
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247726,923,122 - 6,963,250 (+)Ensembl
RefSeq Acc Id: ENSHGLT00000006444   ⟹   ENSHGLP00000006363
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247726,933,086 - 6,946,891 (+)Ensembl
RefSeq Acc Id: XM_004853698   ⟹   XP_004853755
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247726,922,930 - 6,963,250 (+)NCBI
RefSeq Acc Id: XM_004853699   ⟹   XP_004853756
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247726,922,930 - 6,963,250 (+)NCBI
RefSeq Acc Id: XM_004853701   ⟹   XP_004853758
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247726,923,121 - 6,963,250 (+)NCBI
RefSeq Acc Id: XM_021265642   ⟹   XP_021121301
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247726,923,121 - 6,963,250 (+)NCBI
RefSeq Acc Id: XM_021265643   ⟹   XP_021121302
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247726,923,121 - 6,963,250 (+)NCBI
RefSeq Acc Id: XR_205632
Type: NON-CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247726,922,930 - 6,965,718 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_004853756   ⟸   XM_004853699
- Peptide Label: isoform X2
RefSeq Acc Id: XP_004853755   ⟸   XM_004853698
- Peptide Label: isoform X1
- UniProtKB: G5BNY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004853758   ⟸   XM_004853701
- Peptide Label: isoform X1
- UniProtKB: G5BNY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121301   ⟸   XM_021265642
- Peptide Label: isoform X1
- UniProtKB: G5BNY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_021121302   ⟸   XM_021265643
- Peptide Label: isoform X1
- UniProtKB: G5BNY2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000006362   ⟸   ENSHGLT00000006443
RefSeq Acc Id: ENSHGLP00000006363   ⟸   ENSHGLT00000006444
RefSeq Acc Id: ENSHGLP00000006361   ⟸   ENSHGLT00000006442


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004650 Ensembl, ENTREZGENE
  ENSHGLG00100006738 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000006442 ENTREZGENE
  ENSHGLT00000006443 ENTREZGENE
  ENSHGLT00100009178 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1760 UniProtKB/TrEMBL
InterPro CDP-OH_P_trans UniProtKB/TrEMBL
  CDP-OH_PTrfase_TM_dom UniProtKB/TrEMBL
  CDP_ALCOHOL_P_TRANSF_CS UniProtKB/TrEMBL
  CHOPT UniProtKB/TrEMBL
KEGG Report hgl:101721378 UniProtKB/TrEMBL
NCBI Gene Cept1 ENTREZGENE
PANTHER CHOLINE/ETHANOLAMINEPHOSPHOTRANSFERASE 1 UniProtKB/TrEMBL
  PTHR10414 UniProtKB/TrEMBL
Pfam CDP-OH_P_transf UniProtKB/TrEMBL
PIRSF CHOPT UniProtKB/TrEMBL
PROSITE CDP_ALCOHOL_P_TRANSF UniProtKB/TrEMBL
  PROKAR_LIPOPROTEIN UniProtKB/TrEMBL
UniProt G5BNY2 ENTREZGENE, UniProtKB/TrEMBL