Mtmr10 (myotubularin related protein 10) - Rat Genome Database

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Gene: Mtmr10 (myotubularin related protein 10) Heterocephalus glaber
Analyze
Symbol: Mtmr10
Name: myotubularin related protein 10
RGD ID: 18908225
Description: ENCODES a protein that exhibits phosphatidylinositol-3-phosphate phosphatase activity (inferred); INVOLVED IN phosphatidylinositol dephosphorylation (inferred); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); chromosome 15q13.3 microdeletion syndrome (ortholog); FOUND IN cytoplasm (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: myotubularin-related protein 10
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247681,881,210 - 1,923,685 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247681,880,930 - 1,923,685 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
membrane  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
Mtmr10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247681,881,210 - 1,923,685 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247681,880,930 - 1,923,685 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MTMR10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381530,918,716 - 30,991,628 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1530,938,941 - 30,991,628 (-)EnsemblGRCh38hg38GRCh38
GRCh371531,231,144 - 31,283,831 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361529,018,436 - 29,071,099 (-)NCBINCBI36Build 36hg18NCBI36
Celera158,956,604 - 9,009,268 (-)NCBICelera
Cytogenetic Map15q13.3NCBI
HuRef158,408,046 - 8,460,722 (-)NCBIHuRef
CHM1_11531,221,968 - 31,274,650 (-)NCBICHM1_1
T2T-CHM13v2.01528,712,307 - 28,785,709 (-)NCBIT2T-CHM13v2.0
Mtmr10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39763,937,443 - 63,990,556 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl763,937,401 - 63,990,554 (+)EnsemblGRCm39 Ensembl
GRCm38764,287,670 - 64,340,806 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl764,287,653 - 64,340,806 (+)EnsemblGRCm38mm10GRCm38
MGSCv37771,432,556 - 71,485,692 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36764,205,670 - 64,219,224 (+)NCBIMGSCv36mm8
Celera761,733,340 - 61,786,143 (+)NCBICelera
Cytogenetic Map7CNCBI
cM Map734.63NCBI
Mtmr10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81127,271,139 - 127,322,621 (+)NCBIGRCr8
mRatBN7.21117,859,355 - 117,910,839 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1117,859,267 - 117,910,849 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1125,834,394 - 125,885,888 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01133,016,944 - 133,068,440 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01125,847,526 - 125,899,019 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01125,124,743 - 125,175,857 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1125,124,743 - 125,175,857 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01126,233,793 - 126,284,907 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41118,726,116 - 118,777,543 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11118,804,066 - 118,853,569 (+)NCBI
Celera1110,115,488 - 110,166,889 (+)NCBICelera
Cytogenetic Map1q22NCBI
Mtmr10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541629,758,048 - 29,805,029 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541629,758,048 - 29,803,701 (-)NCBIChiLan1.0ChiLan1.0
MTMR10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21619,746,955 - 19,799,959 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11524,471,410 - 24,524,386 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0159,431,261 - 9,484,107 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11528,459,436 - 28,521,997 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1528,469,039 - 28,521,997 (-)Ensemblpanpan1.1panPan2
MTMR10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1337,958,771 - 38,012,893 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl337,960,004 - 38,011,344 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha340,636,502 - 40,697,281 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0338,338,917 - 38,393,228 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl338,340,173 - 38,393,228 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1337,864,339 - 37,918,538 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0338,124,471 - 38,178,707 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0338,328,500 - 38,382,821 (+)NCBIUU_Cfam_GSD_1.0
Mtmr10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640145,418,904 - 145,470,802 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936483863,639 - 916,843 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936483863,667 - 915,579 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MTMR10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1143,867,839 - 143,917,878 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11143,867,746 - 143,917,881 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21159,813,053 - 159,863,324 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MTMR10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12651,670,086 - 51,723,401 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2651,670,132 - 51,724,226 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604889,102,681 - 89,156,022 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000011891   ⟹   ENSHGLP00000011763
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247681,881,210 - 1,923,685 (+)Ensembl
RefSeq Acc Id: XM_004852649   ⟹   XP_004852706
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247681,880,930 - 1,923,685 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004852706 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000011763
GenBank Protein JAO00842 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004852706   ⟸   XM_004852649
- UniProtKB: A0A0P6JHW6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000011763   ⟸   ENSHGLT00000011891


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000008430 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000011891 ENTREZGENE
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
InterPro MTMR10 UniProtKB/TrEMBL
  MTMR10_PH-GRAM UniProtKB/TrEMBL
  MTMR12-like_C UniProtKB/TrEMBL
  Myotubularin-like_Pase_dom UniProtKB/TrEMBL
  Myotubularin_fam UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/TrEMBL
NCBI Gene Mtmr10 ENTREZGENE
PANTHER PTHR10807 UniProtKB/TrEMBL
  PTHR10807:SF39 UniProtKB/TrEMBL
Pfam 3-PAP UniProtKB/TrEMBL
  Myotub-related UniProtKB/TrEMBL
PROSITE PPASE_MYOTUBULARIN UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF52799 UniProtKB/TrEMBL
UniProt A0A0P6JHW6 ENTREZGENE, UniProtKB/TrEMBL