Anapc11 (anaphase promoting complex subunit 11) - Rat Genome Database

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Gene: Anapc11 (anaphase promoting complex subunit 11) Heterocephalus glaber
Analyze
Symbol: Anapc11
Name: anaphase promoting complex subunit 11
RGD ID: 18900004
Description: ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein K11-linked ubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Anaphase-promoting complex subunit 11
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480110,738,224 - 10,742,220 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480110,738,356 - 10,742,334 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Anapc11
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480110,738,224 - 10,742,220 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480110,738,356 - 10,742,334 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ANAPC11
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381781,890,790 - 81,900,533 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1781,890,790 - 81,900,991 (+)EnsemblGRCh38hg38GRCh38
GRCh371779,848,666 - 79,858,409 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361777,442,895 - 77,451,655 (+)NCBINCBI36Build 36hg18NCBI36
Build 341777,442,894 - 77,451,655NCBI
Celera1776,422,607 - 76,462,372 (+)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1775,220,929 - 75,260,043 (+)NCBIHuRef
CHM1_11779,935,803 - 79,944,567 (+)NCBICHM1_1
T2T-CHM13v2.01782,757,952 - 82,767,693 (+)NCBIT2T-CHM13v2.0
Anapc11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911120,489,247 - 120,499,024 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11120,489,247 - 120,499,024 (+)EnsemblGRCm39 Ensembl
GRCm3811120,598,421 - 120,608,198 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11120,598,421 - 120,608,198 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711120,459,735 - 120,469,512 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611120,414,527 - 120,424,288 (+)NCBIMGSCv36mm8
Celera11132,333,712 - 132,343,490 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1184.32NCBI
Anapc11
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810106,373,610 - 106,384,633 (+)NCBIGRCr8
mRatBN7.210105,875,209 - 105,886,307 (+)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx10110,979,137 - 110,990,153 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010110,442,165 - 110,453,181 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010105,795,761 - 105,806,761 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010109,774,779 - 109,785,877 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,774,878 - 109,785,877 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010109,367,837 - 109,378,930 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410109,988,502 - 109,999,500 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera10104,418,716 - 104,429,712 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
ANAPC11
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21998,427,731 - 98,436,346 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan117103,328,559 - 103,337,120 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01776,297,262 - 76,305,826 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11782,002,135 - 82,007,921 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1782,002,135 - 82,007,921 (+)Ensemblpanpan1.1panPan2
ANAPC11
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.19393,900 - 398,925 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl9393,891 - 399,910 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha9996,046 - 1,001,100 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.09987,263 - 992,302 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl9987,273 - 992,295 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.191,012,411 - 1,017,465 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.091,139,005 - 1,144,056 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.091,217,671 - 1,222,711 (-)NCBIUU_Cfam_GSD_1.0
Anapc11
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056021,004,449 - 1,009,673 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365945,402,453 - 5,407,509 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365945,402,290 - 5,407,510 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANAPC11
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1121,095,091 - 1,099,233 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ANAPC11
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11673,765,660 - 73,773,687 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1673,765,674 - 73,773,620 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607745,217,863 - 45,225,864 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000005975   ⟹   ENSHGLP00000005901
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462480110,738,224 - 10,742,220 (+)Ensembl
RefSeq Acc Id: XM_004860965   ⟹   XP_004861022
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462480110,738,356 - 10,742,334 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004861022 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB09341 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000005901
GenBank Protein JAN96677 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_004861022   ⟸   XM_004860965
- UniProtKB: G5BJ80 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSHGLP00000005901   ⟸   ENSHGLT00000005975


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004310 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000005975 ENTREZGENE
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
InterPro RING-H2_APC11 UniProtKB/TrEMBL
  Znf_RING UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report hgl:101713652 UniProtKB/TrEMBL
NCBI Gene Anapc11 ENTREZGENE
PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 UniProtKB/TrEMBL
  RING BOX UniProtKB/TrEMBL
Pfam zf-ANAPC11 UniProtKB/TrEMBL
PROSITE ZF_RING_2 UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
UniProt G5BJ80 ENTREZGENE, UniProtKB/TrEMBL