ASCC2 (activating signal cointegrator 1 complex subunit 2)

Gene: ASCC2 (activating signal cointegrator 1 complex subunit 2) Chlorocebus sabaeus

Analyze

Symbol:

ASCC2

Name:

activating signal cointegrator 1 complex subunit 2

RGD ID:

18746649

Description:

ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (inferred); ubiquitin binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); rescue of stalled ribosome (inferred); ribosome disassembly (inferred); ASSOCIATED WITH Breast Cancer, Familial (ortholog); vestibular schwannomatosis (ortholog); FOUND IN cytosolic ribosome (ortholog); DNA repair complex (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	12,673,642 - 12,725,268 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	12,673,064 - 12,725,233 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	113,421,058 - 113,472,673 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Cancer, Familial (ISO)

vestibular schwannomatosis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of DNA-templated transcription (IEA)

rescue of stalled ribosome (IEA)

ribosome disassembly (IEA)

ribosome-associated ubiquitin-dependent protein catabolic process (IEA)

Cellular Component

activating signal cointegrator 1 complex (IEA)

cytosolic ribosome (IEA,ISO)

DNA repair complex (IEA,ISO)

nucleus (IEA)

Molecular Function

K63-linked polyubiquitin modification-dependent protein binding (IEA)

protein binding (ISO)

ubiquitin binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ASCC2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	12,673,642 - 12,725,268 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	12,673,064 - 12,725,233 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	113,421,058 - 113,472,673 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ASCC2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	29,788,611 - 29,838,274 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	29,788,609 - 29,838,304 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	30,184,600 - 30,234,263 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	28,514,600 - 28,564,254 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	28,509,155 - 28,558,808	NCBI
Celera	22	13,984,318 - 14,033,974 (-)	NCBI		Celera
Cytogenetic Map	22	q12.2	NCBI
HuRef	22	13,146,838 - 13,196,327 (-)	NCBI		HuRef
CHM1_1	22	30,143,775 - 30,193,418 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	30,251,982 - 30,301,644 (-)	NCBI		T2T-CHM13v2.0

Ascc2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	4,587,698 - 4,635,699 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	4,587,747 - 4,635,699 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	4,637,696 - 4,685,699 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	4,637,747 - 4,685,699 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	4,537,796 - 4,583,388 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	4,537,796 - 4,583,388 (+)	NCBI		MGSCv36	mm8
Celera	11	5,138,813 - 5,181,677 (+)	NCBI		Celera
Cytogenetic Map	11	A1	NCBI
cM Map	11	2.94	NCBI

Ascc2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	83,726,975 - 83,771,312 (+)	NCBI		GRCr8
mRatBN7.2	14	79,503,449 - 79,547,801 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	79,503,517 - 79,545,494 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	83,934,172 - 83,976,128 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	85,174,233 - 85,216,197 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	81,623,865 - 81,665,862 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	84,873,507 - 84,913,923 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	84,876,781 - 84,913,617 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	85,550,450 - 85,592,750 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	85,277,839 - 85,320,029 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	14	78,409,997 - 78,452,215 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Ascc2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	4,032,194 - 4,077,953 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955455	4,032,357 - 4,077,900 (-)	NCBI	ChiLan1.0	ChiLan1.0

ASCC2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	39,760,257 - 39,810,219 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	42,461,579 - 42,511,511 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	10,832,102 - 10,881,987 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	28,637,041 - 28,686,019 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	28,637,041 - 28,686,003 (-)	Ensembl	panpan1.1		panPan2

ASCC2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	22,967,880 - 23,009,600 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	22,970,222 - 23,004,731 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	22,838,835 - 22,880,563 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	23,341,402 - 23,383,094 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	23,341,404 - 23,383,009 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	23,051,584 - 23,093,413 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	23,314,145 - 23,355,874 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	23,373,924 - 23,415,658 (-)	NCBI		UU_Cfam_GSD_1.0

Ascc2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	112,118,251 - 112,161,111 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936657	3,707,721 - 3,752,499 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936657	3,709,578 - 3,752,377 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ASCC2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	46,797,317 - 46,842,459 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	46,797,307 - 46,842,479 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	49,832,165 - 49,879,613 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Ascc2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	6,105,753 - 6,149,987 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	6,103,219 - 6,150,011 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36	20	31
Low			29
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007975354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007975355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007975356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007975357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007975358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038007627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000007679 ⟹ ENSCSAP00000005850

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	19	12,673,064 - 12,725,233 (-)	Ensembl

RefSeq Acc Id:

XM_007975354 ⟹ XP_007973545

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	19	12,673,642 - 12,725,268 (-)	NCBI
Vero_WHO_p1.0	NW_023666045	113,421,067 - 113,472,673 (+)	NCBI

Sequence:

show sequence

TTCCTGTCTGCTCCTGCGGAATCGCCGTTTGACCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCA
CCGTGGTCGGCGGCTGCGGCGGCGGCGGCGGAGGAGGTGGCGGCACAGAGCTGGTGGTGGAGCC
GCCGAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAA
GGACCTGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGCACCCCGAGCAGAAGGCAGACCGG
TATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGAGGAGTACCTGG
AACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTG
GTGCCAGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACCTGCGCTATGTCCCC
CGCAAGTTCGACGAGGGGGTGGCCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATC
GAAGTGTTTTTCTCACCTTCCTCCGCATGTCCACTCACAAGGAATCCAAAGATCACTTCATTTC
CCCTTCTGCGTTTGGAGAAATCCTCTACAATAACTTCCTCTTTGACATTCCAAAGATCCTGGAC
CTCTGTGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGAAACATTTTTA
CACAGCAGCCAAGTTACTACAATGACCTGGATGAAACCCTGCCTACCATCCTTCAGGTCTTCAG
CAATATCCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAGTACCACACCCCAGAAGCTCGAG
GAGAGGGGCCGATTGACCCCCAGTGACATGTCTCTCCTGGAGTTAAAGGACATTGTTCTCTACC
TTTGTGATACCTGCACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTT
CCAGAAGCATGACTTTTGTTACAGACTAGCTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAG
TCTGCAATTAAGAAGAGGAGGCTTGAAGATAGCAAGCTTCTAGGTGACCTGTGGCAGAGGCTCT
CCCATTCCAGGAAGAAGCTGATAGAGATTTTCCACATCATCCTGAATCAGATCTGCCTCCTTCC
CATCCTAGAAAGCAGCTGTGACAACATTCAGGGCTTCATCGAAGAGTTCCTTCAGATCTTCAGC
TCCTTGCTGCAGGAGAAGAGGTTCCTCCGGGACTATGATGCACTCTTCCCCGTGGCCGAAGACA
TCAGCTTGCTGCAGCAGGCCTCGTCAGTCTTGGATGAGACACGGACTGCCTACATCCTCCAGGC
AGTCGAGAGTGCATGGGAAGGGGTGGACAGACGGAAAACCACAGATGCTAAAGATCCATTGGTG
ACTGAGGAGCCTAATGGGGTCACGGTGATGGCAGAGGCAGTCAGTCAAGCGTCATCACACCTGG
AGAACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGGCCCTGCTGTGTGTGGGGT
GGAGCTGGACTCACTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGCTTCATC
CTGGCCTGCCTGGAGTACTACCACTACGACCCAGAGCAGGTGATCAACAATATCCTGGAGGAGC
GGCTGGCCCCCACCCTCAGCCAGCTGGACCGCAACCTAGACAGAGAAATGAAACCAGACCCTAC
ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGAC
TCAGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCGCCAGGAAGGAGGAAAACACGCGGAGTT
TGCTGAACGACAAGCGTGCGGTGGCGGCACAGCGGCAGCGCTACGAGCAGTACAGCGTGGTGGT
GGAGGAGGTGCCACTGCAGCCAGGCGAGAGCCTGCCCTACCACAGTGTCTACTATGAGGATGAG
TACGATGACACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCAGACGACGAGCTCA
TCAGCCGCAGGCCATTCACCATCCCTCAGGTGCTGAGAACCAAAGTGCCTAGAGAAGGGCAGGA
GGAAGATGACGATGAGGAAGAGGAGGCTGACGAGGAGGCTCCCAAGCCTGACCATTTCGTGCAG
GACCCTGCAGTGCTGAGAGAGAAAGCAGAAGCCAGGCGCATGGCCTTTCTCGCCAAGAAGGGGT
ACCGGCATGACAGCTCGACAGCAGTGGCCGGCAGCCCCCGGGGCCATGGGCAGAGCCGCGAGAC
AACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGCAACAAGAGCCAACCACAACCGGAGAACG
ATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGGCCTGGTGCAGGGCCAGCGGG
GAGGCAGCGGCACCAGACTCACCAGGCTGCGCTCCCATCGCCTGGGGCCTCCTCACCAGGGTCC
CCAAGTTCAACTCGACCCCTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCCGCCTCTCATC
TACCAGCCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATC
CATGGGGCCGGCAAGCAGGCACCTTCCCCCAGCCGTGCTGGTGGGAAAGGGACGGGCATGGAGT
CCCAAGGCAAGCGCCGCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAG
GAAACCTGTATATTCAAAAACAGAAAAAGGCCTGCTAATAAAATTTTTGACCCTTTCAAACGAA

hide sequence

RefSeq Acc Id:

XM_007975355 ⟹ XP_007973546

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	19	12,673,642 - 12,725,243 (-)	NCBI
Vero_WHO_p1.0	NW_023666045	113,421,067 - 113,472,673 (+)	NCBI

Sequence:

show sequence

CGTTTGACCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGTGGTCGGCGGCTGCGGCGGCGG
CGGCGGAGGAGGTGGCGGCACAGAGCTGGTGGTGGAGCCGCCGAGGAGGGTCACGCAGCACAAT
GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCTGAAGACAGGAAAGCTGAGG
ACTTCACCAGCGCTGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAACCGCCCC
CTAAAGACAACATTCCCGCCCTAGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGA
CCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCCAGGTGATCTTTGACGAGACT
CTACAGAAGTGCCTGGACTCCTACCTGCGCTATGTCCCCCGCAAGTTCGACGAGGGGGTGGCCT
CAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCG
CATGTCCACTCACAAGGAATCCAAAGATCACTTCATTTCCCCTTCTGCGTTTGGAGAAATCCTC
TACAATAACTTCCTCTTTGACATTCCAAAGATCCTGGACCTCTGTGTGCTCTTTGGAAAAGGCA
ACTCACCACTGCTCCAGAAGATGATAGGAAACATTTTTACACAGCAGCCAAGTTACTACAATGA
CCTGGATGAAACCCTGCCTACCATCCTTCAGGTCTTCAGCAATATCCTCCAGCACTGTGGTTTG
CAAGGGGACGGGGCCAGTACCACACCCCAGAAGCTCGAGGAGAGGGGCCGATTGACCCCCAGTG
ACATGTCTCTCCTGGAGTTAAAGGACATTGTTCTCTACCTTTGTGATACCTGCACCACACTTTG
GGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCATGACTTTTGTTACAGG
CTTCTAGGTGACCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCTGATAGAGATTTTCCACA
TCATCCTGAATCAGATCTGCCTCCTTCCCATCCTAGAAAGCAGCTGTGACAACATTCAGGGCTT
CATCGAAGAGTTCCTTCAGATCTTCAGCTCCTTGCTGCAGGAGAAGAGGTTCCTCCGGGACTAT
GATGCACTCTTCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGGCCTCGTCAGTCTTGGATG
AGACACGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGACGGAA
AACCACAGATGCTAAAGATCCATTGGTGACTGAGGAGCCTAATGGGGTCACGGTGATGGCAGAG
GCAGTCAGTCAAGCGTCATCACACCTGGAGAACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCG
CGGCTGTGGGCCCTGCTGTGTGTGGGGTGGAGCTGGACTCACTCATCTCCCAAGTGAAGGACCT
GCTGCCAGACCTTGGTGAGGGCTTCATCCTGGCCTGCCTGGAGTACTACCACTACGACCCAGAG
CAGGTGATCAACAATATCCTGGAGGAGCGGCTGGCCCCCACCCTCAGCCAGCTGGACCGCAACC
TAGACAGAGAAATGAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAA
TGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGC
GCCAGGAAGGAGGAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCGGTGGCGGCACAGCGGC
AGCGCTACGAGCAGTACAGCGTGGTGGTGGAGGAGGTGCCACTGCAGCCAGGCGAGAGCCTGCC
CTACCACAGTGTCTACTATGAGGATGAGTACGATGACACATACGATGGCAACCAGGTGGGCGCC
AATGATGCAGACTCAGACGACGAGCTCATCAGCCGCAGGCCATTCACCATCCCTCAGGTGCTGA
GAACCAAAGTGCCTAGAGAAGGGCAGGAGGAAGATGACGATGAGGAAGAGGAGGCTGACGAGGA
GGCTCCCAAGCCTGACCATTTCGTGCAGGACCCTGCAGTGCTGAGAGAGAAAGCAGAAGCCAGG
CGCATGGCCTTTCTCGCCAAGAAGGGGTACCGGCATGACAGCTCGACAGCAGTGGCCGGCAGCC
CCCGGGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGC
AACAAGAGCCAACCACAACCGGAGAACGATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCA
TCCTGAGGCCTGGTGCAGGGCCAGCGGGGAGGCAGCGGCACCAGACTCACCAGGCTGCGCTCCC
ATCGCCTGGGGCCTCCTCACCAGGGTCCCCAAGTTCAACTCGACCCCTCAACAGCCTCAGCTTT
GCAGCCCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTCCTGCAGAACACA
CAGTGCCTTATGCCACAGCCGAAGAATCCATGGGGCCGGCAAGCAGGCACCTTCCCCCAGCCGT
GCTGGTGGGAAAGGGACGGGCATGGAGTCCCAAGGCAAGCGCCGCAAACCTCGGGCCACAAGAC
ACCACTTCCCCTTTACCCTGGACAGCAGGAAACCTGTATATTCAAAAACAGAAAAAGGCCTGCT
AATAAAATTTTTGACCCTTTCAAACGAA

hide sequence

RefSeq Acc Id:

XM_007975356 ⟹ XP_007973547

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	19	12,673,642 - 12,725,243 (-)	NCBI
Vero_WHO_p1.0	NW_023666045	113,421,058 - 113,472,673 (+)	NCBI

Sequence:

show sequence

CGTTTGACCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGTGGTCGGCGGCTGCGGCGGCGG
CGGCGGAGGAGGTGGCGGCACAGAGCTGGTGGTGGAGCCGCCGAGGAGGGTCACGCAGCACAAT
GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCTGAAGACAGGAAAGCTGAGG
ACTTCACCAGCGCTGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACCTGCGCT
ATGTCCCCCGCAAGTTCGACGAGGGGGTGGCCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCG
CCTCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGTCCACTCACAAGGAATCCAAAGATCAC
TTCATTTCCCCTTCTGCGTTTGGAGAAATCCTCTACAATAACTTCCTCTTTGACATTCCAAAGA
TCCTGGACCTCTGTGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGAAA
CATTTTTACACAGCAGCCAAGTTACTACAATGACCTGGATGAAACCCTGCCTACCATCCTTCAG
GTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAGTACCACACCCCAGA
AGCTCGAGGAGAGGGGCCGATTGACCCCCAGTGACATGTCTCTCCTGGAGTTAAAGGACATTGT
TCTCTACCTTTGTGATACCTGCACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGC
CAGACCTTCCAGAAGCATGACTTTTGTTACAGACTAGCTTCCTTCTACGAAGCAGCAATTCCCG
AAATGGAGTCTGCAATTAAGAAGAGGAGGCTTGAAGATAGCAAGCTTCTAGGTGACCTGTGGCA
GAGGCTCTCCCATTCCAGGAAGAAGCTGATAGAGATTTTCCACATCATCCTGAATCAGATCTGC
CTCCTTCCCATCCTAGAAAGCAGCTGTGACAACATTCAGGGCTTCATCGAAGAGTTCCTTCAGA
TCTTCAGCTCCTTGCTGCAGGAGAAGAGGTTCCTCCGGGACTATGATGCACTCTTCCCCGTGGC
CGAAGACATCAGCTTGCTGCAGCAGGCCTCGTCAGTCTTGGATGAGACACGGACTGCCTACATC
CTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGACGGAAAACCACAGATGCTAAAGATC
CATTGGTGACTGAGGAGCCTAATGGGGTCACGGTGATGGCAGAGGCAGTCAGTCAAGCGTCATC
ACACCTGGAGAACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGGCCCTGCTGTG
TGTGGGGTGGAGCTGGACTCACTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGG
GCTTCATCCTGGCCTGCCTGGAGTACTACCACTACGACCCAGAGCAGGTGATCAACAATATCCT
GGAGGAGCGGCTGGCCCCCACCCTCAGCCAGCTGGACCGCAACCTAGACAGAGAAATGAAACCA
GACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCA
GCAGGGACTCAGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCGCCAGGAAGGAGGAAAACAC
GCGGAGTTTGCTGAACGACAAGCGTGCGGTGGCGGCACAGCGGCAGCGCTACGAGCAGTACAGC
GTGGTGGTGGAGGAGGTGCCACTGCAGCCAGGCGAGAGCCTGCCCTACCACAGTGTCTACTATG
AGGATGAGTACGATGACACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCAGACGA
CGAGCTCATCAGCCGCAGGCCATTCACCATCCCTCAGGTGCTGAGAACCAAAGTGCCTAGAGAA
GGGCAGGAGGAAGATGACGATGAGGAAGAGGAGGCTGACGAGGAGGCTCCCAAGCCTGACCATT
TCGTGCAGGACCCTGCAGTGCTGAGAGAGAAAGCAGAAGCCAGGCGCATGGCCTTTCTCGCCAA
GAAGGGGTACCGGCATGACAGCTCGACAGCAGTGGCCGGCAGCCCCCGGGGCCATGGGCAGAGC
CGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGCAACAAGAGCCAACCACAACC
GGAGAACGATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGGCCTGGTGCAGGG
CCAGCGGGGAGGCAGCGGCACCAGACTCACCAGGCTGCGCTCCCATCGCCTGGGGCCTCCTCAC
CAGGGTCCCCAAGTTCAACTCGACCCCTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCCGC
CTCTCATCTACCAGCCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCC
GAAGAATCCATGGGGCCGGCAAGCAGGCACCTTCCCCCAGCCGTGCTGGTGGGAAAGGGACGGG
CATGGAGTCCCAAGGCAAGCGCCGCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTG
GACAGCAGGAAACCTGTATATTCAAAAACAGAAAAAGGCCTGCTAATAAAATTTTTGACCCTTT
CAAACGAA

hide sequence

RefSeq Acc Id:

XM_007975357 ⟹ XP_007973548

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	19	12,673,642 - 12,725,238 (-)	NCBI
Vero_WHO_p1.0	NW_023666045	113,421,086 - 113,472,673 (+)	NCBI

Sequence:

show sequence

GACCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGTGGTCGGCGGCTGCGGCGGCGGCGGCG
GAGGAGGTGGCGGCACAGAGCTGGTGGTGGAGCCGCCGAGGTGATCTTTGACGAGACTCTACAG
AAGTGCCTGGACTCCTACCTGCGCTATGTCCCCCGCAAGTTCGACGAGGGGGTGGCCTCAGCCC
CTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGTC
CACTCACAAGGAATCCAAAGATCACTTCATTTCCCCTTCTGCGTTTGGAGAAATCCTCTACAAT
AACTTCCTCTTTGACATTCCAAAGATCCTGGACCTCTGTGTGCTCTTTGGAAAAGGCAACTCAC
CACTGCTCCAGAAGATGATAGGAAACATTTTTACACAGCAGCCAAGTTACTACAATGACCTGGA
TGAAACCCTGCCTACCATCCTTCAGGTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGGG
GACGGGGCCAGTACCACACCCCAGAAGCTCGAGGAGAGGGGCCGATTGACCCCCAGTGACATGT
CTCTCCTGGAGTTAAAGGACATTGTTCTCTACCTTTGTGATACCTGCACCACACTTTGGGCCTT
TCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCATGACTTTTGTTACAGACTAGCT
TCCTTCTACGAAGCAGCAATTCCCGAAATGGAGTCTGCAATTAAGAAGAGGAGGCTTGAAGATA
GCAAGCTTCTAGGTGACCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCTGATAGAGATTTT
CCACATCATCCTGAATCAGATCTGCCTCCTTCCCATCCTAGAAAGCAGCTGTGACAACATTCAG
GGCTTCATCGAAGAGTTCCTTCAGATCTTCAGCTCCTTGCTGCAGGAGAAGAGGTTCCTCCGGG
ACTATGATGCACTCTTCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGGCCTCGTCAGTCTT
GGATGAGACACGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGA
CGGAAAACCACAGATGCTAAAGATCCATTGGTGACTGAGGAGCCTAATGGGGTCACGGTGATGG
CAGAGGCAGTCAGTCAAGCGTCATCACACCTGGAGAACTCGGAGGAAGAGGAGTGCATGGGAGC
AGCCGCGGCTGTGGGCCCTGCTGTGTGTGGGGTGGAGCTGGACTCACTCATCTCCCAAGTGAAG
GACCTGCTGCCAGACCTTGGTGAGGGCTTCATCCTGGCCTGCCTGGAGTACTACCACTACGACC
CAGAGCAGGTGATCAACAATATCCTGGAGGAGCGGCTGGCCCCCACCCTCAGCCAGCTGGACCG
CAACCTAGACAGAGAAATGAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTC
CAGAATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGGGTGCACAAGGGCA
AGAGCGCCAGGAAGGAGGAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCGGTGGCGGCACA
GCGGCAGCGCTACGAGCAGTACAGCGTGGTGGTGGAGGAGGTGCCACTGCAGCCAGGCGAGAGC
CTGCCCTACCACAGTGTCTACTATGAGGATGAGTACGATGACACATACGATGGCAACCAGGTGG
GCGCCAATGATGCAGACTCAGACGACGAGCTCATCAGCCGCAGGCCATTCACCATCCCTCAGGT
GCTGAGAACCAAAGTGCCTAGAGAAGGGCAGGAGGAAGATGACGATGAGGAAGAGGAGGCTGAC
GAGGAGGCTCCCAAGCCTGACCATTTCGTGCAGGACCCTGCAGTGCTGAGAGAGAAAGCAGAAG
CCAGGCGCATGGCCTTTCTCGCCAAGAAGGGGTACCGGCATGACAGCTCGACAGCAGTGGCCGG
CAGCCCCCGGGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAAC
AAGGCAACAAGAGCCAACCACAACCGGAGAACGATGGCCGACCGCAAGAGGAGCAAAGGCATGA
TCCCATCCTGAGGCCTGGTGCAGGGCCAGCGGGGAGGCAGCGGCACCAGACTCACCAGGCTGCG
CTCCCATCGCCTGGGGCCTCCTCACCAGGGTCCCCAAGTTCAACTCGACCCCTCAACAGCCTCA
GCTTTGCAGCCCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTCCTGCAGA
ACACACAGTGCCTTATGCCACAGCCGAAGAATCCATGGGGCCGGCAAGCAGGCACCTTCCCCCA
GCCGTGCTGGTGGGAAAGGGACGGGCATGGAGTCCCAAGGCAAGCGCCGCAAACCTCGGGCCAC
AAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCTGTATATTCAAAAACAGAAAAAGGC
CTGCTAATAAAATTTTTGACCCTTTCAAACGAA

hide sequence

RefSeq Acc Id:

XM_038007627 ⟹ XP_037863555

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666045	113,421,058 - 113,472,673 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007973545	(Get FASTA)	NCBI Sequence Viewer
	XP_007973546	(Get FASTA)	NCBI Sequence Viewer
	XP_007973547	(Get FASTA)	NCBI Sequence Viewer
	XP_007973548	(Get FASTA)	NCBI Sequence Viewer
	XP_037863555	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000005850.1

RefSeq Acc Id:	XP_007973545 ⟸ XM_007975354
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9RB61 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007973547 ⟸ XM_007975356
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9RB61 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007973546 ⟸ XM_007975355
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9RB61 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007973548 ⟸ XM_007975357
- Peptide Label:	isoform X5
- UniProtKB:	A0A0D9RB61 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000005850 ⟸ ENSCSAT00000007679

RefSeq Acc Id:	XP_037863555 ⟸ XM_038007627
- Peptide Label:	isoform X4
- UniProtKB:	A0A0D9RB61 (UniProtKB/TrEMBL)

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000009592	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000007679.1	UniProtKB/TrEMBL
Gene3D-CATH	DNA helicase RuvA subunit, C-terminal domain	UniProtKB/TrEMBL
InterPro	ASCC2_CUE	UniProtKB/TrEMBL
	CUE	UniProtKB/TrEMBL
	UBA-like_sf	UniProtKB/TrEMBL
KEGG Report	csab:103223149	UniProtKB/TrEMBL
NCBI Gene	ASCC2	ENTREZGENE
PANTHER	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2	UniProtKB/TrEMBL
	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100	UniProtKB/TrEMBL
Pfam	CUE	UniProtKB/TrEMBL
PROSITE	CUE	UniProtKB/TrEMBL
SMART	CUE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46934	UniProtKB/TrEMBL
UniProt	A0A0D9RB61	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar