NAE1 (NEDD8 activating enzyme E1 subunit 1) - Rat Genome Database

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Gene: NAE1 (NEDD8 activating enzyme E1 subunit 1) Chlorocebus sabaeus
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Symbol: NAE1
Name: NEDD8 activating enzyme E1 subunit 1
RGD ID: 18742585
Description: ENCODES a protein that exhibits NEDD8 activating enzyme activity (ortholog); INVOLVED IN regulation of postsynapse assembly (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH Alzheimer's disease (ortholog); autosomal dominant dyskeratosis congenita 6 (ortholog); cataract 5 multiple types (ortholog); FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NEDD8-activating enzyme E1 regulatory subunit
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1552,502,729 - 52,531,447 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl552,502,546 - 52,525,262 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604723,380,340 - 23,409,070 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NAE1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1552,502,729 - 52,531,447 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl552,502,546 - 52,525,262 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604723,380,340 - 23,409,070 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
NAE1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381666,802,878 - 66,830,976 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1666,802,875 - 66,873,256 (-)EnsemblGRCh38hg38GRCh38
GRCh371666,836,781 - 66,864,879 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361665,394,282 - 65,422,380 (-)NCBINCBI36Build 36hg18NCBI36
Build 341665,394,282 - 65,422,370NCBI
Celera1651,345,091 - 51,373,189 (-)NCBICelera
Cytogenetic Map16q22.1NCBI
HuRef1652,710,930 - 52,739,089 (-)NCBIHuRef
CHM1_11668,243,864 - 68,271,962 (-)NCBICHM1_1
T2T-CHM13v2.01672,597,172 - 72,625,270 (-)NCBIT2T-CHM13v2.0
Nae1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398105,237,660 - 105,261,269 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8105,237,660 - 105,261,269 (-)EnsemblGRCm39 Ensembl
GRCm388104,511,028 - 104,534,656 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8104,511,028 - 104,534,637 (-)EnsemblGRCm38mm10GRCm38
MGSCv378107,034,928 - 107,058,537 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368107,400,153 - 107,423,744 (-)NCBIMGSCv36mm8
Celera8108,742,436 - 108,767,075 (-)NCBICelera
Cytogenetic Map8D3NCBI
cM Map853.04NCBI
Nae1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr819452,462 - 478,591 (+)NCBIGRCr8
mRatBN7.219446,015 - 472,145 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl19446,000 - 472,371 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx19441,827 - 468,061 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0191,208,624 - 1,234,856 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.019483,838 - 510,076 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.019653,510 - 680,378 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl19653,510 - 680,378 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.019646,826 - 673,676 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.419382,556 - 408,667 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.119382,555 - 408,667 (+)NCBI
Celera19446,357 - 467,621 (+)NCBICelera
Cytogenetic Map19p14NCBI
Nae1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543323,333,742 - 23,358,579 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543323,333,797 - 23,358,255 (-)NCBIChiLan1.0ChiLan1.0
NAE1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21876,304,088 - 76,332,248 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11682,216,589 - 82,244,743 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01647,119,548 - 47,147,679 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11666,221,829 - 66,246,648 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1666,221,829 - 66,246,865 (-)Ensemblpanpan1.1panPan2
NAE1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1582,462,690 - 82,486,097 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl582,462,744 - 82,486,100 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha582,451,391 - 82,474,791 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0582,899,329 - 82,922,733 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl582,899,354 - 82,922,729 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1582,722,479 - 82,745,880 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0582,409,395 - 82,433,102 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0583,048,382 - 83,071,880 (+)NCBIUU_Cfam_GSD_1.0
Nae1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934942,483,986 - 42,505,936 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647517,083,077 - 17,105,133 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647517,083,175 - 17,105,098 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAE1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl627,450,632 - 27,540,118 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1627,511,541 - 27,540,142 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Nae1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474619,658,632 - 19,687,884 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474619,648,365 - 19,687,884 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 36 52
Low 20 8
Below cutoff

Sequence


RefSeq Acc Id: ENSCSAT00000002651   ⟹   ENSCSAP00000000950
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl552,502,546 - 52,525,262 (-)Ensembl
RefSeq Acc Id: XM_007993590   ⟹   XP_007991781
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1552,502,729 - 52,531,447 (-)NCBI
Vero_WHO_p1.0NW_02366604723,380,340 - 23,409,070 (+)NCBI
Sequence:
RefSeq Acc Id: XM_007993591   ⟹   XP_007991782
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1552,502,729 - 52,531,447 (-)NCBI
Vero_WHO_p1.0NW_02366604723,380,340 - 23,409,070 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007991781 (Get FASTA)   NCBI Sequence Viewer  
  XP_007991782 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000000950.1
RefSeq Acc Id: XP_007991782   ⟸   XM_007993591
- Peptide Label: isoform X2
- UniProtKB: A0A0D9QX61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007991781   ⟸   XM_007993590
- Peptide Label: isoform X1
- UniProtKB: A0A0D9QX61 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000000950   ⟸   ENSCSAT00000002651


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000004620 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000002651.1 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro APP-BP1 UniProtKB/TrEMBL
  ThiF/MoeB/HesA UniProtKB/TrEMBL
  Ubiquitin-activating_enz UniProtKB/TrEMBL
NCBI Gene NAE1 ENTREZGENE
PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT UniProtKB/TrEMBL
  UBIQUITIN-ACTIVATING ENZYME E1 UniProtKB/TrEMBL
PIRSF APP-BP1 UniProtKB/TrEMBL
Superfamily-SCOP SSF69572 UniProtKB/TrEMBL
UniProt A0A0D9QX61 ENTREZGENE, UniProtKB/TrEMBL