C4BPA (complement component 4 binding protein alpha) - Rat Genome Database

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Pathways
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Gene: C4BPA (complement component 4 binding protein alpha) Chlorocebus sabaeus
Analyze
Symbol: C4BPA
Name: complement component 4 binding protein alpha
RGD ID: 18730844
Description: INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); common variable immunodeficiency 7 (ortholog); COVID-19 (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal vesicle (ortholog); cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C4b-binding protein alpha chain
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12522,169,355 - 22,254,331 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605522,832,939 - 22,844,116 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
C4BPA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12522,169,355 - 22,254,331 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605522,832,939 - 22,844,116 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
C4BPA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381207,104,233 - 207,144,972 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1207,104,233 - 207,144,972 (+)EnsemblGRCh38hg38GRCh38
GRCh371207,277,578 - 207,318,317 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361205,344,230 - 205,384,940 (+)NCBINCBI36Build 36hg18NCBI36
Build 341203,666,001 - 203,706,701NCBI
Celera1180,529,170 - 180,570,903 (+)NCBICelera
Cytogenetic Map1q32.2NCBI
HuRef1177,975,014 - 178,014,972 (+)NCBIHuRef
CHM1_11208,550,269 - 208,591,017 (+)NCBICHM1_1
T2T-CHM13v2.01206,369,472 - 206,410,221 (+)NCBIT2T-CHM13v2.0
Zp3r
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391130,474,847 - 130,557,371 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1130,504,450 - 130,557,358 (-)EnsemblGRCm39 Ensembl
GRCm381130,547,110 - 130,629,634 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1130,576,713 - 130,629,621 (-)EnsemblGRCm38mm10GRCm38
MGSCv371132,473,283 - 132,526,183 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361132,404,259 - 132,457,141 (-)NCBIMGSCv36mm8
Celera1133,204,292 - 133,253,007 (-)NCBICelera
Cytogenetic Map1E4NCBI
cM Map156.89NCBI
C4bpa
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81344,627,959 - 44,663,552 (-)NCBIGRCr8
mRatBN7.21342,075,715 - 42,111,205 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1342,075,717 - 42,111,205 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1344,682,730 - 44,717,817 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01345,970,875 - 46,005,959 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01343,215,123 - 43,250,642 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01347,342,090 - 47,377,580 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1347,342,079 - 47,377,703 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01352,430,754 - 52,466,244 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41343,552,947 - 43,588,565 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11343,567,082 - 43,598,278 (-)NCBI
Celera1342,426,949 - 42,461,963 (-)NCBICelera
RH 3.4 Map13109.8RGD
Cytogenetic Map13q13NCBI
C4bpa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540642,613,607 - 42,641,670 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540642,613,659 - 42,641,918 (+)NCBIChiLan1.0ChiLan1.0
LOC100984709
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2142,225,348 - 42,261,919 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1142,191,856 - 42,232,559 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01182,707,221 - 182,747,878 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11186,985,220 - 187,025,898 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1186,985,264 - 187,025,898 (+)Ensemblpanpan1.1panPan2
C4BPA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.176,239,036 - 6,268,934 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl76,241,102 - 6,268,910 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha75,802,297 - 5,832,192 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.075,927,762 - 5,957,518 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl75,929,843 - 5,957,511 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.175,861,425 - 5,891,162 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.075,962,886 - 5,992,819 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.076,003,175 - 6,033,127 (+)NCBIUU_Cfam_GSD_1.0
C4BPA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl967,731,179 - 67,776,115 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1967,726,159 - 67,774,369 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2974,106,142 - 74,154,500 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_037986151   ⟹   XP_037842079
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605522,832,939 - 22,844,116 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037842079 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_037842079   ⟸   XM_037986151


Additional Information

Database Acc Id Source(s)
NCBI Gene C4BPA ENTREZGENE