ULBP3 (UL16 binding protein 3) - Rat Genome Database

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Gene: ULBP3 (UL16 binding protein 3) Chlorocebus sabaeus
Analyze
Symbol: ULBP3
Name: UL16 binding protein 3
RGD ID: 18723606
Description: ENCODES a protein that exhibits natural killer cell lectin-like receptor binding (inferred); INVOLVED IN immune response (inferred); natural killer cell activation (inferred); natural killer cell mediated cytotoxicity (inferred); ASSOCIATED WITH alopecia areata (ortholog); genetic disease (ortholog); FOUND IN external side of plasma membrane (inferred); extracellular space (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NKG2D ligand 3; UL16-binding protein 3
RGD Orthologs
Human
Mouse
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11377,468,549 - 77,491,049 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604049,784,772 - 49,792,197 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ULBP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11377,468,549 - 77,491,049 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604049,784,772 - 49,792,197 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ULBP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386150,061,053 - 150,069,121 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6150,061,053 - 150,069,121 (-)EnsemblGRCh38hg38GRCh38
GRCh376150,382,189 - 150,390,257 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366150,427,436 - 150,431,895 (-)NCBINCBI36Build 36hg18NCBI36
Build 346150,477,856 - 150,482,316NCBI
Celera6151,120,359 - 151,124,818 (-)NCBICelera
Cytogenetic Map6q25.1NCBI
HuRef6147,951,284 - 147,955,743 (-)NCBIHuRef
CHM1_16150,649,822 - 150,654,280 (-)NCBICHM1_1
T2T-CHM13v2.06151,260,425 - 151,268,490 (-)NCBIT2T-CHM13v2.0
Ulbp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39103,069,841 - 3,079,546 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl103,069,841 - 3,079,546 (+)EnsemblGRCm39 Ensembl
GRCm38103,119,841 - 3,129,546 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl103,119,841 - 3,129,546 (+)EnsemblGRCm38mm10GRCm38
MGSCv37107,216,995 - 7,226,702 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36107,216,995 - 7,226,706 (-)NCBIMGSCv36mm8
Celera103,056,370 - 3,062,758 (+)NCBICelera
Cytogenetic Map10A1NCBI
cM Map102.17NCBI
ULBP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25170,081,569 - 170,089,158 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16167,970,858 - 167,982,851 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06147,875,098 - 147,882,746 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16152,581,661 - 152,588,430 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6152,581,662 - 152,588,430 (-)Ensemblpanpan1.1panPan2
LOC100683099
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1140,635,616 - 40,639,865 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha141,470,619 - 41,479,553 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0140,813,581 - 40,822,515 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1140,689,601 - 40,694,330 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0140,533,511 - 40,542,443 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0141,036,702 - 41,044,977 (+)NCBIUU_Cfam_GSD_1.0
ULBP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl116,113,780 - 16,119,273 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1116,113,774 - 16,119,273 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2118,557,294 - 18,563,424 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038001109   ⟹   XP_037857037
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604049,784,772 - 49,791,715 (-)NCBI
RefSeq Acc Id: XM_038001110   ⟹   XP_037857038
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604049,785,094 - 49,792,197 (-)NCBI
Protein Sequences
Protein RefSeqs XP_037857037 (Get FASTA)   NCBI Sequence Viewer  
  XP_037857038 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000010582.1
Reference Protein Sequences
RefSeq Acc Id: XP_037857037   ⟸   XM_038001109
- Peptide Label: isoform X1
- UniProtKB: A0A0D9RPP3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037857038   ⟸   XM_038001110
- Peptide Label: isoform X2
- UniProtKB: A0A0D9RPP3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000014456 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000012549.1 UniProtKB/TrEMBL
Gene3D-CATH MHC class I-like antigen recognition-like UniProtKB/TrEMBL
InterPro MHC_I-like_Ag-recog UniProtKB/TrEMBL
  MHC_I-like_Ag-recog_sf UniProtKB/TrEMBL
  MHC_I/II-like_Ag-recog UniProtKB/TrEMBL
NCBI Gene ULBP3 ENTREZGENE
PANTHER MHC CLASS I-RELATED UniProtKB/TrEMBL
  UL16-BINDING PROTEIN 3 UniProtKB/TrEMBL
Pfam MHC_I UniProtKB/TrEMBL
Superfamily-SCOP MHC antigen-recognition domain UniProtKB/TrEMBL
UniProt A0A0D9RPP3 ENTREZGENE, UniProtKB/TrEMBL