ACP3 (acid phosphatase 3) - Rat Genome Database

Name: ACP3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ACP3 (acid phosphatase 3) Chlorocebus sabaeus

Analyze

Symbol:

ACP3

Name:

acid phosphatase 3

RGD ID:

18682779

Description:

ENCODES a protein that exhibits acid phosphatase activity (ortholog); choline binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN dephosphorylation (ortholog); ASSOCIATED WITH alkaptonuria (ortholog); juvenile rheumatoid arthritis (ortholog); Primary Lymphedema with Myelodysplasia (ortholog); FOUND IN apical part of cell (ortholog); Golgi cisterna (ortholog); multivesicular body (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

acid phosphatase, prostate; ACPP; prostatic acid phosphatase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ACP3 (acid phosphatase 3)	NCBI	Ortholog
Mus musculus (house mouse):	Acp3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Acp3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Acp3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ACP3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ACP3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Acp3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ACP3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Acp3 (acid phosphatase 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	57,887,528 - 57,934,851 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	57,887,365 - 57,934,707 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	30,876,931 - 30,930,054 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alkaptonuria (ISO)

juvenile rheumatoid arthritis (ISO)

Primary Lymphedema with Myelodysplasia (ISO)

prostate cancer (ISO)

Prostatic Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adenosine metabolic process (IEA)

dephosphorylation (ISO)

lysosome organization (IEA)

nucleotide metabolic process (IEA)

positive regulation of adenosine receptor signaling pathway (IEA)

purine nucleobase metabolic process (IEA)

regulation of sensory perception of pain (IEA)

thiamine metabolic process (IEA)

Cellular Component

apical part of cell (ISO)

extracellular space (IEA)

filopodium (IEA)

Golgi cisterna (ISO)

lysosome (IEA)

membrane (IEA)

multivesicular body (ISO)

plasma membrane (IEA)

secretory granule (ISO)

vesicle membrane (IEA)

Molecular Function

5'-nucleotidase activity (IEA)

acid phosphatase activity (IEA,ISO)

choline binding (ISO)

identical protein binding (IEA)

lysophosphatidic acid phosphatase activity (IEA)

molecular adaptor activity (ISO)

phosphatase activity (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

thiamine phosphate phosphatase activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ACP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	57,887,528 - 57,934,851 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	57,887,365 - 57,934,707 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	30,876,931 - 30,930,054 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ACP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	132,317,407 - 132,368,302 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	132,317,369 - 132,368,302 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	132,036,251 - 132,087,146 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	133,518,949 - 133,560,294 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	133,518,956 - 133,560,298	NCBI
Celera	3	130,462,489 - 130,513,425 (+)	NCBI		Celera
Cytogenetic Map	3	q22.1	ENTREZGENE
HuRef	3	129,415,425 - 129,466,393 (+)	NCBI		HuRef
CHM1_1	3	131,999,235 - 132,050,170 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	135,061,847 - 135,112,776 (+)	NCBI		T2T-CHM13v2.0

Acp3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	104,165,439 - 104,214,921 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	104,165,450 - 104,214,947 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	104,288,240 - 104,337,722 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	104,288,251 - 104,337,748 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	104,190,570 - 104,240,052 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	104,146,585 - 104,196,067 (-)	NCBI		MGSCv36	mm8
Celera	9	103,840,497 - 103,890,048 (-)	NCBI		Celera
Cytogenetic Map	9	F1	NCBI
cM Map	9	56.61	NCBI

Acp3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	113,784,372 - 113,833,033 (-)	NCBI		GRCr8
mRatBN7.2	8	104,905,570 - 104,956,146 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	104,905,586 - 104,954,236 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	110,555,965 - 110,601,143 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	108,755,152 - 108,800,326 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	106,597,855 - 106,643,027 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	112,838,574 - 112,884,062 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	112,834,707 - 112,884,077 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	112,224,707 - 112,272,400 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	109,354,381 - 109,400,296 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	109,382,705 - 109,419,751 (-)	NCBI
Celera	8	104,274,154 - 104,317,190 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Acp3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955501	6,164,152 - 6,218,967 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955501	6,168,083 - 6,218,934 (-)	NCBI	ChiLan1.0	ChiLan1.0

ACP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	130,267,935 - 130,324,616 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	130,272,663 - 130,330,166 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	129,392,396 - 129,465,962 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	136,713,816 - 136,764,655 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	136,713,816 - 136,764,655 (+)	Ensembl	panpan1.1		panPan2

ACP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	29,294,641 - 29,353,970 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	29,294,843 - 29,343,499 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	29,269,310 - 29,328,452 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	29,807,873 - 29,866,994 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	29,807,934 - 29,849,928 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	29,500,099 - 29,559,146 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	29,558,604 - 29,617,766 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	29,808,824 - 29,868,045 (+)	NCBI		UU_Cfam_GSD_1.0

Acp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	68,901,255 - 68,964,887 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936529	5,661,702 - 5,725,363 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936529	5,661,772 - 5,723,108 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	73,471,889 - 73,530,011 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	73,471,837 - 73,530,778 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	81,003,170 - 81,028,400 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Acp3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	8,375,258 - 8,432,302 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	8,375,429 - 8,441,375 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium		15
Low	36	5	44
Below cutoff			16

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008009118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000008617 ⟹ ENSCSAP00000006762

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	15	57,887,365 - 57,934,707 (-)	Ensembl

RefSeq Acc Id:

XM_008009118 ⟹ XP_008007309

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	15	57,887,528 - 57,934,851 (-)	NCBI
Vero_WHO_p1.0	NW_023666041	30,876,931 - 30,930,054 (-)	NCBI

Sequence:

show sequence

AAATTATATGACATTATTTACATACCAAACCTGCCCTACGCTTCCTGGAAACTTTACTATTTAT
GAGTGTGGCTCCTCCTTCCTTTCAATCCCTTAATTAAACAGCTTCCCCTCTACAGGCTTTTGAA
GTGGTGGCAGTTCCTCCTAACTCCTGCCAGAAACAGCTCTCGTCAACATGAGAGCTGCACCCCT
CCTCGTGGCCAGGGCAGCAAGCCTTAGCCTTGGCTTCTTGTTTCTGCTTTTTTTCTGGCTAGAC
CGAGGTGTACTAGCCAAGGAGTTGAAGTTTGTGACTTTGGTGTTTCGGCATGGAGACCGAAGTC
CCATTGACACCTTTCCCACTGACCCCATAAAGGAATCCTCATGGCCACAAGGATTTGGCCAACT
CACCCAGCTGGGCATGGAGCAGCATTATGAACTTGGAGAGTATATAAGAGAGAGATATAGAACA
TTCTTGAATGAGTCCTATAAACATGAACAGGTTTACATTCGAAGCACAGATGTTGACCGTACTT
TGATGAGTGCTATGACAAACCTGGCAGCCCTGTTTCCCCCAGAGGGTGCCAGCATCTGGAATCC
TAATCTACTCTGGCAGCCCATCCCAGTGCACACAGTTCCTCTTTCTGAAGATCAGTTGCTATAC
CTGCCTTTCAGGAACTGCCCTCGTTTTCAAGAACTTGGGAGTGAGACTTTGACATCAGAGGAAT
TCCAGAAGAGGCTGCACCCTTATAAGGATTTTATAGCTACCTTGGGAAAACTTTCAGGATTCCA
TGACAAGGACCTTTTTGGAATTTGGAGTAAAATCTACGACCCTTTATATTGTGAGAGTGTTCAC
AATTTCACTTTACCTTCCTGGGCCACTGAGGACGCCATGACCAAACTGAGAGAGTTGTCAGAAT
TGTCCCTCCTGTCCCTCTATGGAATTCACAAGCAGAAAGAGAAATCTAGGCTCCAAGGGGGTGT
CCTGGTCAATGAAATCCTCAATCACATGAAGAGAGCAACTCAGATGCCAAGCTACAAAAAACTT
ATCATGTATTCTACACATGACACTACTGTGAGTGGCCTACAGGTGGCGCTAGATGTTTTCAACG
GACTCCTTCCTCCCTATGCTGCTTGCCACTTGATGGAATTGTACTTTGAGAAGGGGGAGTACTT
TGTGGAGATGTACTATCGGAATGAGACGCAGCACGAGCCGTATCTGCTCACGCTACCTGGCTGC
AGCCCCAGCTGTCCTCTGGAGAGGTTTGCTGAGCTAGTTGGCCCTGTGATCCCTCAAGACTGGT
CCACGGAGTGTATGACCACAAGCAGCCATCAAGTTCTAAAGGTCATCTTTGCTGTTGTCTTTTG
CCTGATATCTGCTGTCCTAATGGTACTGCTGTTTATCCACATTCGCCGTGGACCCTGCTGGCAG
AGAGACTCCTATGGGAACATCTAAACAGACAGCTGGATAAGCCAGGCCAACCTCCTGTGACACA
GCATCTCTCAGTGGTGCCGCATCTAAAGGATAGGTTTTTGCCATGTGGGCATTGCCGTCCTCAC
ACCTTGCCTTTTGAATCTGCCTAGAGCAGGGTCTGAACTCACAGGGACCCACAGACAGCTGCTG
GACTGACAGATGAATGAACACCAAGGTTACCTAGGTCTTCTCATCATGGAGTGGTAGTGCAGGC
TGCTAGTTCAGCTAGAAAGAGGCTGTTATGCATAGGATGGTTGTATTCTCCGCCACAGTTGTCC
AGAGAGAAATAAGAAGCCAAACTCCAATCAGCTTTTTACCTGCAAAGAGCGAAGGATGAGAAGG
TGGACAAAGACATAGATTAGAAAAATACTGGATATTGGGGGAAGTTAGACTAGAAGTAGTATTA
TACAGGGTGATTCCTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCACTCTATCG

hide sequence

Protein Sequences


Protein RefSeqs	XP_008007309	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000006762.1

RefSeq Acc Id:	XP_008007309 ⟸ XM_008009118
- UniProtKB:	A0A0D9RDS3 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000006762 ⟸ ENSCSAT00000008617

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000010534	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000008617.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1240	UniProtKB/TrEMBL
InterPro	Acid_Pase_AS	UniProtKB/TrEMBL
	His_Pase_clade-2	UniProtKB/TrEMBL
	His_PPase_superfam	UniProtKB/TrEMBL
KEGG Report	csab:103241671	UniProtKB/TrEMBL
NCBI Gene	ACP3	ENTREZGENE
PANTHER	ACID PHOSPHATASE-RELATED	UniProtKB/TrEMBL
	PROSTATIC ACID PHOSPHATASE	UniProtKB/TrEMBL
Pfam	His_Phos_2	UniProtKB/TrEMBL
PROSITE	HIS_ACID_PHOSPHAT_1	UniProtKB/TrEMBL
	HIS_ACID_PHOSPHAT_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53254	UniProtKB/TrEMBL
UniProt	A0A0D9RDS3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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