EML3 (EMAP like 3) - Rat Genome Database

Name: EML3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: EML3 (EMAP like 3) Chlorocebus sabaeus

Analyze

Symbol:

EML3

Name:

EMAP like 3

RGD ID:

18681281

Description:

ENCODES a protein that exhibits microtubule binding (inferred); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); leukocyte adhesion deficiency 3 (ortholog); retinitis pigmentosa (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

echinoderm microtubule associated protein like 3; echinoderm microtubule-associated protein-like 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EML3 (EMAP like 3)	NCBI	Ortholog
Mus musculus (house mouse):	Eml3 (echinoderm microtubule associated protein like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Eml3 (EMAP like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Eml3 (EMAP like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EML3 (EMAP like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EML3 (EMAP like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Eml3 (EMAP like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EML3 (EMAP like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Eml3 (EMAP like 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	11,292,181 - 11,302,723 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	11,292,202 - 11,302,472 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	108,627,173 - 108,637,973 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

leukocyte adhesion deficiency 3 (ISO)

retinitis pigmentosa (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

microtubule cytoskeleton organization (IEA)

mitotic metaphase chromosome alignment (ISO)

regulation of mitotic spindle assembly (ISO)

Cellular Component

cytoplasm (ISO)

cytoskeleton (IEA)

microtubule cytoskeleton (ISO)

midbody (ISO)

mitotic spindle (IEA)

mitotic spindle microtubule (ISO)

nucleus (ISO)

spindle (ISO)

spindle microtubule (ISO)

Molecular Function

microtubule binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

EML3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	11,292,181 - 11,302,723 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	11,292,202 - 11,302,472 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	108,627,173 - 108,637,973 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

EML3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	62,602,218 - 62,612,775 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	62,602,218 - 62,612,775 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	62,369,690 - 62,380,247 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	62,126,267 - 62,136,813 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	59,699,256 - 59,709,802 (-)	NCBI		Celera
Cytogenetic Map	11	q12.3	NCBI
HuRef	11	58,698,607 - 58,709,155 (-)	NCBI		HuRef
CHM1_1	11	62,252,737 - 62,263,283 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	62,591,666 - 62,602,223 (-)	NCBI		T2T-CHM13v2.0

Eml3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	8,904,584 - 8,918,946 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	8,906,916 - 8,918,946 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	8,929,663 - 8,941,582 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	8,929,552 - 8,941,582 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	9,004,184 - 9,016,072 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	8,996,739 - 9,008,627 (+)	NCBI		MGSCv36	mm8
Celera	19	8,690,471 - 8,702,356 (+)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	6.04	NCBI

Eml3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	215,255,459 - 215,266,895 (+)	NCBI		GRCr8
mRatBN7.2	1	205,826,354 - 205,837,790 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	205,817,378 - 205,837,807 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	214,234,786 - 214,246,239 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	221,269,720 - 221,281,156 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	213,962,577 - 213,974,013 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	225,128,997 - 225,140,472 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	225,129,097 - 225,140,428 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	232,066,640 - 232,078,092 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	1	203,339,113 - 203,350,588 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

Eml3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955599	580,341 - 587,613 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955599	580,203 - 587,268 (+)	NCBI	ChiLan1.0	ChiLan1.0

EML3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	63,829,452 - 63,840,027 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	64,872,161 - 64,882,710 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	57,959,763 - 57,970,312 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	61,314,360 - 61,324,592 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	61,305,373 - 61,324,592 (-)	Ensembl	panpan1.1		panPan2

EML3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	54,027,836 - 54,037,398 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	54,028,188 - 54,037,163 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	52,633,005 - 52,643,024 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	55,080,460 - 55,090,458 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	55,080,413 - 55,090,006 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	54,176,575 - 54,186,553 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	53,751,437 - 53,761,454 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	54,547,090 - 54,556,994 (+)	NCBI		UU_Cfam_GSD_1.0

Eml3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	10,531,013 - 10,540,717 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936581	644,841 - 654,538 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936581	644,841 - 654,539 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EML3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	9,127,698 - 9,137,653 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	9,127,680 - 9,137,651 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	8,472,985 - 8,483,369 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Eml3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624926	1,133,301 - 1,140,149 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624926	1,133,177 - 1,140,440 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36	8	30
Low		12	30
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007995517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007995526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007995536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000004653 ⟹ ENSCSAP00000002899

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	1	11,292,202 - 11,302,472 (+)	Ensembl

RefSeq Acc Id:

XM_007995517 ⟹ XP_007993708

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	11,292,217 - 11,302,723 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	108,627,173 - 108,637,973 (+)	NCBI

Sequence:

show sequence

CCCGGACGGCCCCGCCACCCCTCCCCCGGGAGCCGAGAGCGGCCCCGGGAGAATCTGAGGGCCC
GGGGGGGTCTGGGGACTGCGGACCCGGGCCCACAGCGCCCCCTCCAGGCCCCTTCCCCGCGCCC
GATAGCGCCCCCGCGGGGTGGTGGTACGGCGCCCTTCGCGCGCGCCCCGGGGTGCTTCCCCTTC
CCCTCTCCCCGGCCGTGGCCCCCGCGGCTTAGACGCCTCCTCCGCCGCCGCCGCTCGGAGCAAC
CCGGGGGCCGGATGGACGGGGCCGCGGGGCCCGGTGAGGGCCCTGCTCGGGAGGCCCTGCAGTC
TCTGAGCCAGCGGCTTCGGGTGCAGGAGCAGGAGATGGAGCTGGTAAAAGCAGCCCTGGCAGAA
GCCCTTCGCCTGCTGCGGCTGCAGGTGCCGCCTTCCTCTCTGCAGGTCTCTGGCACACCAGCTC
CTCCAGGGGACAGCAGTTTTGCGGCGCCCCCAGGACTGCCACCCACGCGCACCCCTTCGTTGGT
GAGCCGAGGCACGCAGACGGAGACAGAGGTGGAGTTCAAGTCATCCCCTGGACCCCCTGGCCTG
AGCAATGGACCCCCAGCCCCTCAGGGGGCCAGTGAAGAGCCTAGTGGGACCCAGTCTGAAGGAG
GGGGCAGCAGCAGCAGTGGTGCTGGCTCCCCCGGCCCCCCGGGAATCCTCAGGCCCTTGCAGCC
CCCACAGCGTGCTGACACGCCGCGAAGAAATTCTTCCTCCTCCTCATCCCCCTCAGAGCGGCCT
CGGCAGAAGCTCTCCAGGAAGGCAATTTCCTCCGCCAACCTGTTAGTGCGGTCCGGGAGCACGG
AGAGCCGTGGGGGAAAAGACCCCCTTTCTAGCCCCGGGGGCCCTGGATCTCGGAGGAGCAATTA
CAATTTGGAAGGCATCTCAGTGAAGATGTTCCTTCGAGGCCGCCCCATTACCATGTACATCCCA
TCTGGCATCCGCAGCCTGGAGGAGCTGCCGAGCGGCCCACCGCCGGAGACCCTCTGCCTTGACT
GGGTTTACGGGTACAGGGGTCGTGATTCCCGCTCTAATCTGTTTGTGCTGCGCTCCGGGGAGGT
GGTCTACTTTATCGCCTGCGTGGTGGTGCTGTACCGGCCTGGAGGAGGCCCAGGGGGTCCTGGA
GGCGGCGGCCAGAGACATTACCGGGGGCACACAGACTGCGTTCGATGCCTTGCTGTTCACCCTG
ATGGTGTTCGGGTAGCCTCGGGACAGACAGCTGGAGTGGATAAGGATGGAAAGCCCCTGCAGCC
TGTGGTTCACATCTGGGACTCAGAGACGCTGTTGAAACTGCAGGAGATTGGACTGGGGGCCTTC
GAGCGGGGTGTTGGGGCCCTGGCCTTTTCAGCTGCGGATCAGGGTGCCTTTCTTTGTGTGGTGG
ATGACTCCAATGAGCACATGCTGTCGGTGTGGGACTGCAGCCGGGGAGTGAAGCTGGCTGAGAT
CAAGAGTACAAATGACTCAGTCCTGGCCGTTGGCTTCAACCCTCGTGACAGCAGCTGCATCGTC
ACCAGTGGGAAATCTCACGTCCACTTCTGGAATTGGAGTGGTGGAGTAGGGGTTCCTGGGAATG
GGACCCTTACCCGGAAACAGGGTGTCTTTGGGAAATACAAGAAACCCAAGTTTATTCCTTGCTT
TGTGTTCCTTCCGGATGGAGACATTCTCACTGGAGACTCAGAGGGGAACATTCTCACCTGGGGG
CGGAGTGCTTCGGATTCCAAGACCCCAGGCAGGGGTGGGGCCAAAGAGACCTATGGGATTGTGG
CCCAGGCTCACGCTCATGAAGGTTCCATCTTCGCCTTGTGTCTCCAGCGGGACGGGACAGTGCT
GAGTGGTGGCGGGCGGGACCGCCGGCTGGTACAGTGGGGGCCCGGGTTGGTGGCCCTCCAGGAG
GCTGAGATTCCTGAGCACTTTGGGGCCGTGCGAGCCATTGCTGAAGGGCTTGGCTCTGAGCTGC
TGGTGGGAACCACGAAGAATGCATTGCTGAGGGGAGATCTGGCCCAAGGCTTCTCCCCTGTAAT
CCAGGGTCACACTGATGAGCTCTGGGGGCTCTGCACACACCCCTCCCAGAACCGCTTCCTCACC
TGCGGCCATGACCGGCAGCTCTGCCTGTGGGATGGGGAGAGCCATGCGCTGGCCTGGAGCATCG
ACCTCAAGGAGACTGGTCTCTGTGCTGACTTCCACCCGAGTGGGGCAGTTGTGGCCGTAGGACT
GAACACGGGGAGGTGGTTGGTTTTGGACACAGAGACCAGAGAGATCGTGTCTGATGTCATTGAT
GGCAATGAGCAGCTCTCAGTGGTCCGGTACAGCCCAGATGGGTTGTACCTGGCCATTGGTTCCC
ATGACAACGTGATCTACATCTATAGTGTTTCCAGTGATGGCGCCAAATCCAGCCGCTTTGGCCG
CTGTATGGGTCACTCCAGCTTCATCACTCATCTTGACTGGTCCAAGGATGGGAATTTCATCATG
TCCAATTCTGGGGACTATGAGATTCTTTACTGGGACGTGGCTGGAGGCTGCAAGCAGCTGAAGA
ATCGCTATGAGAGCCGAGACCGGGAATGGGCTACCTACACCTGCGTGCTGGGTTTCCACGTCTA
CGGCGTGTGGCCGGACGGCTCCGATGGGACCGACATCAACTCCCTGTGCCGCTCCCACAACGAG
CGCGTGGTGGCGGTGGCCGACGACTTCTGCAAAGTGCATCTATTCCAGTACCCGTGCGCTCGTG
CCAAGGCGCCGAGCCGCATGTACGGGGGCCACGGCAGCCACGTGACCAGCGTCCGGTTCACGCA
CGACGACTCGCACCTCGTATCGCTGGGCGGCAAGGACGCCAGCATCTTCCAGTGGCGAGTGCTG
GGCGCTGGGGGCGCGGGGCCGGCGCCTGCCACGCCCTCTCGAACCCCCTCCCTCTCTCCTGCCT
CCTCCCTCGACGTTTGATCGCTGCCGGTGGGACCTACTGGCCTGGCGGCGTGGCCCCGCCCCGC
TCTGCCCTGCCCTAATCCCCCACGACCAGGGGCCGACTCTTTCCTCGACTGACTTCGAAACATT
CCCGACGGCGCATTTCCCTGGAGGGCGCGAACGGCGCCCCTGCACACACTGTTTAGACCCGCTG
GTTGAGCCGGGCAGCCCCAACCTAGGCCTTGACTCCCGCTGCCTGCTGAGGGGCAATAAACCAG
AACCAAAGTCGC

hide sequence

RefSeq Acc Id:

XM_007995526 ⟹ XP_007993717

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	11,292,181 - 11,302,723 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	108,627,173 - 108,637,973 (+)	NCBI

Sequence:

show sequence

CGCGTCCGGCGCCTGTTTGTGCTGCGGCGCTGTGGCCCCGGACGGCCCCGCCACCCCTCCCCCG
GGAGCCGAGAGCGGCCCCGGGAGAATCTGAGGGCCCGGGGGGGTCTGGGGACTGCGGACCCGGG
CCCACAGCGCCCCCTCCAGGCCCCTTCCCCGCGCCCGATAGCGCCCCCGCGGGGTGGTGGTACG
GCGCCCTTCGCGCGCGCCCCGGGGTGCTTCCCCTTCCCCTCTCCCCGGCCGTGGCCCCCGCGGC
TTAGACGCCTCCTCCGCCGCCGCCGCTCGGAGCAACCCGGGGGCCGGATGGACGGGGCCGCGGG
GCCCGGTGAGGGCCCTGCTCGGGAGGCCCTGCAGTCTCTGAGCCAGCGGCTTCGGGTGCAGGAG
CAGGAGATGGAGCTGGTAAAAGCAGCCCTGGCAGAAGCCCTTCGCCTGCTGCGGCTGCAGGTGC
CGCCTTCCTCTCTGCAGGTCTCTGGCACACCAGCTCCTCCAGGGGACAGTTTTGCGGCGCCCCC
AGGACTGCCACCCACGCGCACCCCTTCGTTGGTGAGCCGAGGCACGCAGACGGAGACAGAGGTG
GAGTTCAAGTCATCCCCTGGACCCCCTGGCCTGAGCAATGGACCCCCAGCCCCTCAGGGGGCCA
GTGAAGAGCCTAGTGGGACCCAGTCTGAAGGAGGGGGCAGCAGCAGCAGTGGTGCTGGCTCCCC
CGGCCCCCCGGGAATCCTCAGGCCCTTGCAGCCCCCACAGCGTGCTGACACGCCGCGAAGAAAT
TCTTCCTCCTCCTCATCCCCCTCAGAGCGGCCTCGGCAGAAGCTCTCCAGGAAGGCAATTTCCT
CCGCCAACCTGTTAGTGCGGTCCGGGAGCACGGAGAGCCGTGGGGGAAAAGACCCCCTTTCTAG
CCCCGGGGGCCCTGGATCTCGGAGGAGCAATTACAATTTGGAAGGCATCTCAGTGAAGATGTTC
CTTCGAGGCCGCCCCATTACCATGTACATCCCATCTGGCATCCGCAGCCTGGAGGAGCTGCCGA
GCGGCCCACCGCCGGAGACCCTCTGCCTTGACTGGGTTTACGGGTACAGGGGTCGTGATTCCCG
CTCTAATCTGTTTGTGCTGCGCTCCGGGGAGGTGGTCTACTTTATCGCCTGCGTGGTGGTGCTG
TACCGGCCTGGAGGAGGCCCAGGGGGTCCTGGAGGCGGCGGCCAGAGACATTACCGGGGGCACA
CAGACTGCGTTCGATGCCTTGCTGTTCACCCTGATGGTGTTCGGGTAGCCTCGGGACAGACAGC
TGGAGTGGATAAGGATGGAAAGCCCCTGCAGCCTGTGGTTCACATCTGGGACTCAGAGACGCTG
TTGAAACTGCAGGAGATTGGACTGGGGGCCTTCGAGCGGGGTGTTGGGGCCCTGGCCTTTTCAG
CTGCGGATCAGGGTGCCTTTCTTTGTGTGGTGGATGACTCCAATGAGCACATGCTGTCGGTGTG
GGACTGCAGCCGGGGAGTGAAGCTGGCTGAGATCAAGAGTACAAATGACTCAGTCCTGGCCGTT
GGCTTCAACCCTCGTGACAGCAGCTGCATCGTCACCAGTGGGAAATCTCACGTCCACTTCTGGA
ATTGGAGTGGTGGAGTAGGGGTTCCTGGGAATGGGACCCTTACCCGGAAACAGGGTGTCTTTGG
GAAATACAAGAAACCCAAGTTTATTCCTTGCTTTGTGTTCCTTCCGGATGGAGACATTCTCACT
GGAGACTCAGAGGGGAACATTCTCACCTGGGGGCGGAGTGCTTCGGATTCCAAGACCCCAGGCA
GGGGTGGGGCCAAAGAGACCTATGGGATTGTGGCCCAGGCTCACGCTCATGAAGGTTCCATCTT
CGCCTTGTGTCTCCAGCGGGACGGGACAGTGCTGAGTGGTGGCGGGCGGGACCGCCGGCTGGTA
CAGTGGGGGCCCGGGTTGGTGGCCCTCCAGGAGGCTGAGATTCCTGAGCACTTTGGGGCCGTGC
GAGCCATTGCTGAAGGGCTTGGCTCTGAGCTGCTGGTGGGAACCACGAAGAATGCATTGCTGAG
GGGAGATCTGGCCCAAGGCTTCTCCCCTGTAATCCAGGGTCACACTGATGAGCTCTGGGGGCTC
TGCACACACCCCTCCCAGAACCGCTTCCTCACCTGCGGCCATGACCGGCAGCTCTGCCTGTGGG
ATGGGGAGAGCCATGCGCTGGCCTGGAGCATCGACCTCAAGGAGACTGGTCTCTGTGCTGACTT
CCACCCGAGTGGGGCAGTTGTGGCCGTAGGACTGAACACGGGGAGGTGGTTGGTTTTGGACACA
GAGACCAGAGAGATCGTGTCTGATGTCATTGATGGCAATGAGCAGCTCTCAGTGGTCCGGTACA
GCCCAGATGGGTTGTACCTGGCCATTGGTTCCCATGACAACGTGATCTACATCTATAGTGTTTC
CAGTGATGGCGCCAAATCCAGCCGCTTTGGCCGCTGTATGGGTCACTCCAGCTTCATCACTCAT
CTTGACTGGTCCAAGGATGGGAATTTCATCATGTCCAATTCTGGGGACTATGAGATTCTTTACT
GGGACGTGGCTGGAGGCTGCAAGCAGCTGAAGAATCGCTATGAGAGCCGAGACCGGGAATGGGC
TACCTACACCTGCGTGCTGGGTTTCCACGTCTACGGCGTGTGGCCGGACGGCTCCGATGGGACC
GACATCAACTCCCTGTGCCGCTCCCACAACGAGCGCGTGGTGGCGGTGGCCGACGACTTCTGCA
AAGTGCATCTATTCCAGTACCCGTGCGCTCGTGCCAAGGCGCCGAGCCGCATGTACGGGGGCCA
CGGCAGCCACGTGACCAGCGTCCGGTTCACGCACGACGACTCGCACCTCGTATCGCTGGGCGGC
AAGGACGCCAGCATCTTCCAGTGGCGAGTGCTGGGCGCTGGGGGCGCGGGGCCGGCGCCTGCCA
CGCCCTCTCGAACCCCCTCCCTCTCTCCTGCCTCCTCCCTCGACGTTTGATCGCTGCCGGTGGG
ACCTACTGGCCTGGCGGCGTGGCCCCGCCCCGCTCTGCCCTGCCCTAATCCCCCACGACCAGGG
GCCGACTCTTTCCTCGACTGACTTCGAAACATTCCCGACGGCGCATTTCCCTGGAGGGCGCGAA
CGGCGCCCCTGCACACACTGTTTAGACCCGCTGGTTGAGCCGGGCAGCCCCAACCTAGGCCTTG
ACTCCCGCTGCCTGCTGAGGGGCAATAAACCAGAACCAAAGTCGC

hide sequence

RefSeq Acc Id:

XM_007995536 ⟹ XP_007993727

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	1	11,292,217 - 11,302,723 (+)	NCBI
Vero_WHO_p1.0	NW_023666038	108,627,173 - 108,637,973 (+)	NCBI

Sequence:

show sequence

CCCGGACGGCCCCGCCACCCCTCCCCCGGGAGCCGAGAGCGGCCCCGGGAGAATCTGAGGGCCC
GGGGGGGTCTGGGGACTGCGGACCCGGGCCCACAGCGCCCCCTCCAGGCCCCTTCCCCGCGCCC
GATAGCGCCCCCGCGGGGTGGTGGTACGGCGCCCTTCGCGCGCGCCCCGGGGTGCTTCCCCTTC
CCCTCTCCCCGGCCGTGGCCCCCGCGGCTTAGACGCCTCCTCCGCCGCCGCCGCTCGGAGCAAC
CCGGGGGCCGGATGGACGGGGCCGCGGGGCCCGGTGAGGGCCCTGCTCGGGAGGCCCTGCAGTC
TCTGAGCCAGCGGCTTCGGGTGCAGGAGCAGGAGATGGAGCTGGTAAAAGCAGCCCTGGCAGAA
GCCCTTCGCCTGCTGCGGCTGCAGGTGCCGCCTTCCTCTCTGCAGGTCTCTGGCACACCAGCTC
CTCCAGGGGACAGCAGTTTTGCGGCGCCCCCAGGACTGCCACCCACGCGCACCCCTTCGTTGGT
GAGCCGAGGCACGCAGACGGAGACAGAGGTGGAGTTCAAGTCATCCCCTGGACCCCCTGGCCTG
AGCAATGGACCCCCAGCCCCTCAGGGGGCCAGTGAAGAGCCTAGTGGGACCCAGTCTGAAGGAG
GGGGCAGCAGCAGCAGTGGTGCTGGCTCCCCCGGCCCCCCGGGAATCCTCAGGCCCTTGCAGCC
CCCACAGCGTGCTGACACGCCGCGAAGAAATTCTTCCTCCTCCTCATCCCCCTCAGAGCGGCCT
CGGCAGAAGCTCTCCAGGAAGGCAATTTCCTCCGCCAACCTGTTAGTGCGGTCCGGGAGCACGG
AGAGCCGTGGGGGAAAAGACCCCCTTTCTAGCCCCGGGGGCCCTGGATCTCGGAGGAGCAATTA
CAATTTGGAAGGCATCTCAGTGAAGATGTTCCTTCGAGGCCGCCCCATTACCATGTACATCCCA
TCTGGCATCCGCAGCCTGGAGGAGCTGCCGAGCGGCCCACCGCCGGAGACCCTCTGCCTTGACT
GGGTTTACGGGTACAGGGGTCGTGATTCCCGCTCTAATCTGTTTGTGCTGCGCTCCGGGGAGGT
GGTCTACTTTATCGCCTGCGTGGTGGTGCTGTACCGGCCTGGAGGAGGCCCAGGGGGTCCTGGA
GGCGGCGGCCAGAGACATTACCGGGGGCACACAGACTGCGTTCGATGCCTTGCTGTTCACCCTG
ATGGTGTTCGGGTAGCCTCGGGACAGACAGCTGGAGTGGATAAGGATGGAAAGCCCCTGCAGCC
TGTGGTTCACATCTGGGACTCAGAGACGCTGTTGAAACTGCAGGAGATTGGACTGGGGGCCTTC
GAGCGGGGTGTTGGGGCCCTGGCCTTTTCAGCTGCGGATCAGGGTGCCTTTCTTTGTGTGGTGG
ATGACTCCAATGAGCACATGCTGTCGGTGTGGGACTGCAGCCGGGGAGTGAAGCTGGCTGAGAT
CAAGAAATACAAGAAACCCAAGTTTATTCCTTGCTTTGTGTTCCTTCCGGATGGAGACATTCTC
ACTGGAGACTCAGAGGGGAACATTCTCACCTGGGGGCGGAGTGCTTCGGATTCCAAGACCCCAG
GCAGGGGTGGGGCCAAAGAGACCTATGGGATTGTGGCCCAGGCTCACGCTCATGAAGGTTCCAT
CTTCGCCTTGTGTCTCCAGCGGGACGGGACAGTGCTGAGTGGTGGCGGGCGGGACCGCCGGCTG
GTACAGTGGGGGCCCGGGTTGGTGGCCCTCCAGGAGGCTGAGATTCCTGAGCACTTTGGGGCCG
TGCGAGCCATTGCTGAAGGGCTTGGCTCTGAGCTGCTGGTGGGAACCACGAAGAATGCATTGCT
GAGGGGAGATCTGGCCCAAGGCTTCTCCCCTGTAATCCAGGGTCACACTGATGAGCTCTGGGGG
CTCTGCACACACCCCTCCCAGAACCGCTTCCTCACCTGCGGCCATGACCGGCAGCTCTGCCTGT
GGGATGGGGAGAGCCATGCGCTGGCCTGGAGCATCGACCTCAAGGAGACTGGTCTCTGTGCTGA
CTTCCACCCGAGTGGGGCAGTTGTGGCCGTAGGACTGAACACGGGGAGGTGGTTGGTTTTGGAC
ACAGAGACCAGAGAGATCGTGTCTGATGTCATTGATGGCAATGAGCAGCTCTCAGTGGTCCGGT
ACAGCCCAGATGGGTTGTACCTGGCCATTGGTTCCCATGACAACGTGATCTACATCTATAGTGT
TTCCAGTGATGGCGCCAAATCCAGCCGCTTTGGCCGCTGTATGGGTCACTCCAGCTTCATCACT
CATCTTGACTGGTCCAAGGATGGGAATTTCATCATGTCCAATTCTGGGGACTATGAGATTCTTT
ACTGGGACGTGGCTGGAGGCTGCAAGCAGCTGAAGAATCGCTATGAGAGCCGAGACCGGGAATG
GGCTACCTACACCTGCGTGCTGGGTTTCCACGTCTACGGCGTGTGGCCGGACGGCTCCGATGGG
ACCGACATCAACTCCCTGTGCCGCTCCCACAACGAGCGCGTGGTGGCGGTGGCCGACGACTTCT
GCAAAGTGCATCTATTCCAGTACCCGTGCGCTCGTGCCAAGGCGCCGAGCCGCATGTACGGGGG
CCACGGCAGCCACGTGACCAGCGTCCGGTTCACGCACGACGACTCGCACCTCGTATCGCTGGGC
GGCAAGGACGCCAGCATCTTCCAGTGGCGAGTGCTGGGCGCTGGGGGCGCGGGGCCGGCGCCTG
CCACGCCCTCTCGAACCCCCTCCCTCTCTCCTGCCTCCTCCCTCGACGTTTGATCGCTGCCGGT
GGGACCTACTGGCCTGGCGGCGTGGCCCCGCCCCGCTCTGCCCTGCCCTAATCCCCCACGACCA
GGGGCCGACTCTTTCCTCGACTGACTTCGAAACATTCCCGACGGCGCATTTCCCTGGAGGGCGC
GAACGGCGCCCCTGCACACACTGTTTAGACCCGCTGGTTGAGCCGGGCAGCCCCAACCTAGGCC
TTGACTCCCGCTGCCTGCTGAGGGGCAATAAACCAGAACCAAAGTCGC

hide sequence

Protein Sequences


Protein RefSeqs	XP_007993708	(Get FASTA)	NCBI Sequence Viewer
	XP_007993717	(Get FASTA)	NCBI Sequence Viewer
	XP_007993727	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000002899.1

RefSeq Acc Id:	XP_007993717 ⟸ XM_007995526
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9R2R0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007993708 ⟸ XM_007995517
- Peptide Label:	isoform X1
- UniProtKB:	A0A0D9R2R0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007993727 ⟸ XM_007995536
- Peptide Label:	isoform X3
- UniProtKB:	A0A0D9R2R0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000002899 ⟸ ENSCSAT00000004653

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000006615	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000004653.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
InterPro	HELP	UniProtKB/TrEMBL
	Quinoprot_gluc/sorb_DH	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_dom_sf	UniProtKB/TrEMBL
NCBI Gene	EML3	ENTREZGENE
PANTHER	ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 3	UniProtKB/TrEMBL
	WD-40 REPEAT PROTEIN	UniProtKB/TrEMBL
Pfam	HELP	UniProtKB/TrEMBL
	WD40	UniProtKB/TrEMBL
PROSITE	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50952	UniProtKB/TrEMBL
	SSF50978	UniProtKB/TrEMBL
UniProt	A0A0D9R2R0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar