LOC103233559 (SHC-transforming protein 2) - Rat Genome Database

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Pathways
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Gene: LOC103233559 (SHC-transforming protein 2) Chlorocebus sabaeus
Analyze
Symbol: LOC103233559
Name: SHC-transforming protein 2
RGD ID: 18551310
Description: ENCODES a protein that exhibits receptor tyrosine kinase binding (inferred); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (inferred); intracellular signal transduction (inferred); FOUND IN plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: SHC adaptor protein 2; SHC2
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.16151,955 - 193,626 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366687521,359 - 28,693 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 35 36
Low 1 15 24
Below cutoff 5

Sequence


Reference Sequences
RefSeq Acc Id: XM_037995983   ⟹   XP_037851911
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366687521,810 - 28,529 (+)NCBI
RefSeq Acc Id: XR_005239637
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366687521,359 - 28,693 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037851911 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000009242.1
Reference Protein Sequences
RefSeq Acc Id: XP_037851911   ⟸   XM_037995983


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000013091 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000011161.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  3.30.505.10 UniProtKB/TrEMBL
InterPro PH-like_dom_sf UniProtKB/TrEMBL
  PID_Shc-like UniProtKB/TrEMBL
  PTB/PI_dom UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/TrEMBL
  SHC_SH2 UniProtKB/TrEMBL
NCBI Gene SHC2 ENTREZGENE
PANTHER PTHR10337:SF5 UniProtKB/TrEMBL
  SHC TRANSFORMING PROTEIN UniProtKB/TrEMBL
Pfam PID UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
PRINTS SH2DOMAIN UniProtKB/TrEMBL
  SHCPIDOMAIN UniProtKB/TrEMBL
PROSITE PID UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
SMART PTB UniProtKB/TrEMBL
  SH2 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF55550 UniProtKB/TrEMBL
UniProt A0A0D9RKV3_CHLSB UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-08 LOC103233559  SHC-transforming protein 2  SHC2  SHC adaptor protein 2  Symbol and/or name change 5135510 APPROVED