SERPINB9 (serpin family B member 9) - Rat Genome Database

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Gene: SERPINB9 (serpin family B member 9) Chlorocebus sabaeus
Analyze
Symbol: SERPINB9
Name: serpin family B member 9
RGD ID: 18537115
Description: ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (inferred); protease binding (inferred); serine-type endopeptidase inhibitor activity (inferred); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); defense response to bacterium (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Chloracne (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serpin B9
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11769,258,377 - 69,272,954 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1769,259,258 - 69,272,501 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660442,827,755 - 2,841,889 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SERPINB9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11769,258,377 - 69,272,954 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1769,259,258 - 69,272,501 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660442,827,755 - 2,841,889 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
SERPINB9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3862,887,270 - 2,903,309 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl62,887,270 - 2,903,309 (-)EnsemblGRCh38hg38GRCh38
GRCh3762,887,504 - 2,903,543 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3662,832,503 - 2,848,506 (-)NCBINCBI36Build 36hg18NCBI36
Build 3462,832,504 - 2,848,506NCBI
Celera64,116,448 - 4,132,549 (-)NCBICelera
Cytogenetic Map6p25.2NCBI
HuRef62,760,622 - 2,776,671 (-)NCBIHuRef
CHM1_162,889,873 - 2,905,917 (-)NCBICHM1_1
T2T-CHM13v2.062,753,393 - 2,769,547 (-)NCBIT2T-CHM13v2.0
Serpinb9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391333,181,044 - 33,201,938 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1333,187,233 - 33,201,940 (+)EnsemblGRCm39 Ensembl
GRCm381332,997,061 - 33,017,955 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1333,003,250 - 33,017,957 (+)EnsemblGRCm38mm10GRCm38
MGSCv371333,096,410 - 33,109,824 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361333,012,078 - 33,024,345 (+)NCBIMGSCv36mm8
Celera1333,206,042 - 33,219,456 (+)NCBICelera
Cytogenetic Map13A3.2- A3.3NCBI
cM Map1313.79NCBI
Serpinb9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81731,628,887 - 31,652,003 (-)NCBIGRCr8
mRatBN7.21731,420,118 - 31,443,237 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1731,420,125 - 31,443,230 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1731,255,927 - 31,267,358 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01732,859,687 - 32,871,118 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01731,251,684 - 31,263,115 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01732,648,846 - 32,673,047 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1732,650,441 - 32,661,865 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01734,541,052 - 34,565,258 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41737,780,179 - 37,791,625 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1730,982,972 - 30,994,418 (-)NCBICelera
Cytogenetic Map17p12NCBI
SERPINB9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2517,513,350 - 17,528,231 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1613,505,441 - 13,522,068 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v062,709,188 - 2,725,592 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.162,812,815 - 2,827,991 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl62,812,815 - 2,827,932 (-)Ensemblpanpan1.1panPan2
SERPINB9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1353,186,209 - 3,200,894 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl353,190,543 - 3,199,690 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha353,193,426 - 3,208,344 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0353,241,311 - 3,256,956 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl353,241,318 - 3,256,861 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1353,117,105 - 3,131,897 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0353,140,027 - 3,155,645 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0354,472,126 - 4,487,763 (-)NCBIUU_Cfam_GSD_1.0
SERPINB9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl71,721,383 - 1,735,074 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.171,723,302 - 1,732,562 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.271,843,801 - 1,845,589 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_007973849   ⟹   XP_007972040
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11769,258,377 - 69,272,954 (+)NCBI
Vero_WHO_p1.0NW_0236660442,827,755 - 2,841,889 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038005699   ⟹   XP_037861627
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660442,827,817 - 2,841,733 (-)NCBI
Protein Sequences
Protein RefSeqs XP_007972040 (Get FASTA)   NCBI Sequence Viewer  
  XP_037861627 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000003473.1
Reference Protein Sequences
RefSeq Acc Id: XP_007972040   ⟸   XM_007973849
- UniProtKB: A0A0D9R4D4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_037861627   ⟸   XM_038005699
- UniProtKB: A0A0D9R4D4 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000007207 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000005250.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.39.10 UniProtKB/TrEMBL
  3.30.497.10 UniProtKB/TrEMBL
InterPro Serpin_B9/Maspin UniProtKB/TrEMBL
  Serpin_CS UniProtKB/TrEMBL
  Serpin_dom UniProtKB/TrEMBL
  Serpin_fam UniProtKB/TrEMBL
  Serpin_sf UniProtKB/TrEMBL
  Serpin_sf_1 UniProtKB/TrEMBL
  Serpin_sf_2 UniProtKB/TrEMBL
NCBI Gene SERPINB9 ENTREZGENE
PANTHER PTHR11461 UniProtKB/TrEMBL
  SERPIN B9 UniProtKB/TrEMBL
Pfam Serpin UniProtKB/TrEMBL
PRINTS MASPIN UniProtKB/TrEMBL
PROSITE SERPIN UniProtKB/TrEMBL
SMART SERPIN UniProtKB/TrEMBL
Superfamily-SCOP SSF56574 UniProtKB/TrEMBL
UniProt A0A0D9R4D4 ENTREZGENE, UniProtKB/TrEMBL