ZNF385A (zinc finger protein 385A)

Gene: ZNF385A (zinc finger protein 385A) Chlorocebus sabaeus

Analyze

Symbol:

ZNF385A

Name:

zinc finger protein 385A

RGD ID:

18509300

Description:

ENCODES a protein that exhibits mRNA 3'-UTR binding (inferred); nucleic acid binding (inferred); p53 binding (inferred); INVOLVED IN hemostasis (ortholog); intracellular mRNA localization (ortholog); learning or memory (ortholog); PARTICIPATES IN p53 signaling pathway; FOUND IN chromatin (inferred); cytosol (inferred); dendrite (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	50,483,974 - 50,507,178 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	50,483,666 - 50,507,233 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	195,529,979 - 195,555,262 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA)

DNA damage response (IEA)

hemostasis (IEA,ISO)

intracellular mRNA localization (IEA,ISO)

learning or memory (IEA,ISO)

locomotory behavior (IEA,ISO)

megakaryocyte development (IEA,ISO)

mRNA localization resulting in post-transcriptional regulation of gene expression (IEA,ISO)

negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (IEA)

platelet alpha granule organization (IEA,ISO)

platelet formation (IEA,ISO)

positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (IEA)

positive regulation of fat cell differentiation (IEA,ISO)

regulation of cytoplasmic translation (IEA,ISO)

Cellular Component

chromatin (IEA)

cytosol (IEA)

dendrite (IEA)

neuronal cell body (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

mRNA 3'-UTR binding (IEA)

nucleic acid binding (IEA)

p53 binding (IEA)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

p53 signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ZNF385A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	50,483,974 - 50,507,178 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	50,483,666 - 50,507,233 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	195,529,979 - 195,555,262 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

ZNF385A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	54,369,136 - 54,391,298 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	54,369,133 - 54,391,298 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	54,762,920 - 54,785,082 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	53,049,187 - 53,064,748 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	53,049,186 - 53,064,748	NCBI
Celera	12	54,414,766 - 54,436,926 (-)	NCBI		Celera
Cytogenetic Map	12	q13.13	NCBI
HuRef	12	51,802,044 - 51,824,180 (-)	NCBI		HuRef
CHM1_1	12	54,729,616 - 54,751,775 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	54,335,713 - 54,357,883 (-)	NCBI		T2T-CHM13v2.0

Zfp385a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	103,222,322 - 103,248,537 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	103,222,322 - 103,248,520 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	103,313,895 - 103,340,086 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	103,313,895 - 103,340,093 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	103,144,326 - 103,170,517 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	103,141,921 - 103,168,118 (-)	NCBI		MGSCv36	mm8
Celera	15	105,478,449 - 105,506,078 (-)	NCBI		Celera
Cytogenetic Map	15	F3	NCBI
cM Map	15	58.88	NCBI

Zfp385a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	136,327,393 - 136,354,017 (-)	NCBI		GRCr8
mRatBN7.2	7	134,448,914 - 134,475,548 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	134,448,921 - 134,475,548 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	136,204,072 - 136,230,695 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	138,433,440 - 138,460,063 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	138,419,646 - 138,446,311 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,939,616 - 144,966,364 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,939,619 - 144,966,370 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	142,719,638 - 142,746,041 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	142,222,824 - 142,250,176 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	130,872,610 - 130,899,895 (-)	NCBI		Celera
Cytogenetic Map	7	q36	NCBI

Znf385a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	1,610,245 - 1,631,639 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955458	1,610,245 - 1,631,639 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZNF385A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	39,780,653 - 39,803,443 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	39,778,007 - 39,800,212 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	34,353,975 - 34,376,172 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	35,080,820 - 35,102,248 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	35,080,820 - 35,102,248 (+)	Ensembl	panpan1.1		panPan2

ZNF385A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	928,250 - 948,275 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	928,349 - 947,186 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	45,306,907 - 45,327,089 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	925,455 - 945,609 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	925,533 - 945,614 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	917,199 - 937,282 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	926,163 - 946,306 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	45,710,805 - 45,730,969 (-)	NCBI		UU_Cfam_GSD_1.0

Znf385a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	61,579,725 - 61,602,195 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936512	11,561,435 - 11,585,402 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936512	11,562,635 - 11,585,026 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF385A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	19,560,318 - 19,583,221 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	19,560,317 - 19,583,254 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	20,417,581 - 20,440,612 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Znf385a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624904	2,392,342 - 2,414,792 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624904	2,392,425 - 2,414,806 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	20		21
Low	16	15	39
Below cutoff		5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008003518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008003519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008003520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037996987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000003439 ⟹ ENSCSAP00000001716

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	11	50,483,666 - 50,507,233 (-)	Ensembl

RefSeq Acc Id:

XM_008003518 ⟹ XP_008001709

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	11	50,483,975 - 50,507,178 (-)	NCBI
Vero_WHO_p1.0	NW_023666037	195,530,020 - 195,555,262 (+)	NCBI

Sequence:

show sequence

GCTCCTCCCCGGCTCCTCCCCCCGTACCCCCAGCCCGGCCAGAACGGCCCCCGGGACAGAGCGA
CGCGGAACCCCGGGCGCCTGGGTCCCCAGCATGATCCTCGGCAGCCTGAGCCGGGCAGGGCCCC
TGCCTCTGCTACGGCAGCCCCCCATCATGCAGCCCCCGCTGGACCTCAAGCAGATCCTGCCCTT
CCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTACAGCACCATGGACCCTGTACAG
AAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCTCAAGACCAAGCGCCCCGTCATTTCCT
GTAATGTCTGTCAAATCCGCTTCAATTCTCAGAGCCAGGCTGAGGCACACTACAAGGGTAACCG
CCACGCCCGACGAGTCAAAGGCATTGAGGCCGCCAAGACCAGAGGCAGGGAGCCTGGCATCCGA
GAACCTGGAGACCCAGCCCCCCCAGGCAGCACCCCGACAAATGGGGATGGTGTAGCACCCCGTC
CAGTTTCCATGGAGAATGGACTGGGGCCAGCCCCAGGATCCCCAGAGAAACAGCCTGGCTCCCC
ATCCCCTCCCAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGGTGAAGGGGGGACTCCAGCC
CCAGCTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACTGTG
CTCTGTGCAAGGTGGCTGTGAACTCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACTAAGCA
CAAGACAATTCTGGAGGCCCGAAGTGGGCTGGGGCCCATCAAAGCTTACCCTCGGCTGGGGCCT
CCCACCCCGGGGGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAATG
TCAAGGTCAACTCGGAGGTCCAACTGAAACAGCACATCTCCAGCCGGCGGCACCGAGACGGAGT
GGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGGCGCCGGGGAGCTGGCG
GGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGGCCTTCTCCCCAGCCCCC
TGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCCAGC
CGCACCTCTTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTCACCCGGCCCCCGGACCCATC
CGAACTGCGCACGGACCCATCCTCTTCTCCCCCTACTGACCTCAACCCTGAACCCCTCCCATTC
AACTCCCCACCTCCAGCCGGGACCCAGGCCTCCGGGCTCCCAGCCCGCCCCTCCTCCCGGCACT
CCCTAAATGATCTCTCCTTCCCCCCCCACCCCGAGATACGGGGTTCCAGGAAAGGGGAGGGGTA
GCGGGGGAGGGGGGCTTCAGAAGGGGGGGAACACCCCAGATCTCAGGGAACCCCGCCCCCTGCC
TTTCCCTCTCCCCTAGAAAAGGGGGGGCCGTCTCACCCCCGAGCCCCCTTGGAGACACCCCCCC
TCCCAAAAGCCATGTCCATCCAGCCCTTCGCCCCCAAACCTAGCACAAAACGGGGTTCACAAGC
CATGGTGGGGGTCCGGGGGGACAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGGACTCCG
GCCCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGTAGGGGGAGGGGAGCA
GGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCCGCC
CCGCACCATGCCCCAGCCCCAGGTCTAGCAGGGCCCATCGCAGGGGGCAGCACTTGGGGGCATC
TCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGCCTTCTTCCTCCCT
AGTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGGGGCAAGGGGT
GTCCAGTCCAAGCCCACCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAAGCC
TCGCCCCCGCCCCTCCCCTTCCGCAGAATTCGCCGAGTCTGTAGCCTCCCCATCCCAGTTCCTA
GACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACCCGGGCGGGGGTGTGACAC
CCCGCCCCGGCCCCCGACTCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGGAGG
GGTCCGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTCTGCTTGACAATGTAGCAACCCC
GGCCCCCCACCCACGGTCCTCCCCTTTTTGCTCTCCCTGACAATAAAGTCTGAATTTGTTCTGC
CCTCCG

hide sequence

RefSeq Acc Id:

XM_008003519 ⟹ XP_008001710

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	11	50,483,974 - 50,501,614 (-)	NCBI
Vero_WHO_p1.0	NW_023666037	195,535,564 - 195,555,262 (+)	NCBI

Sequence:

show sequence

GAGGGGGCAGAGGGCAGAACCAAGGGAAGGGGACCCTGTCAGGCCCAGGCCCCTGGGGGGCCAG
GGCCAGGCCACTGCCTGGGGGCAGCAGGCACAAGAAACTAAAGGCAGCCTGAGCCGGGCAGGGC
CCCTGCCTCTGCTACGGCAGCCCCCCATCATGCAGCCCCCGCTGGACCTCAAGCAGATCCTGCC
CTTCCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTACAGCACCATGGACCCTGTA
CAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCTCAAGACCAAGCGCCCCGTCATTT
CCTGTAATGTCTGTCAAATCCGCTTCAATTCTCAGAGCCAGGCTGAGGCACACTACAAGGGTAA
CCGCCACGCCCGACGAGTCAAAGGCATTGAGGCCGCCAAGACCAGAGGCAGGGAGCCTGGCATC
CGAGAACCTGGAGACCCAGCCCCCCCAGGCAGCACCCCGACAAATGGGGATGGTGTAGCACCCC
GTCCAGTTTCCATGGAGAATGGACTGGGGCCAGCCCCAGGATCCCCAGAGAAACAGCCTGGCTC
CCCATCCCCTCCCAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGGTGAAGGGGGGACTCCA
GCCCCAGCTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACT
GTGCTCTGTGCAAGGTGGCTGTGAACTCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACTAA
GCACAAGACAATTCTGGAGGCCCGAAGTGGGCTGGGGCCCATCAAAGCTTACCCTCGGCTGGGG
CCTCCCACCCCGGGGGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCACTGTGAGATCTGCA
ATGTCAAGGTCAACTCGGAGGTCCAACTGAAACAGCACATCTCCAGCCGGCGGCACCGAGACGG
AGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGGCGCCGGGGAGCTG
GCGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGGCCTTCTCCCCAGCC
CCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCC
AGCCGCACCTCTTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTCACCCGGCCCCCGGACCC
ATCCGAACTGCGCACGGACCCATCCTCTTCTCCCCCTACTGACCTCAACCCTGAACCCCTCCCA
TTCAACTCCCCACCTCCAGCCGGGACCCAGGCCTCCGGGCTCCCAGCCCGCCCCTCCTCCCGGC
ACTCCCTAAATGATCTCTCCTTCCCCCCCCACCCCGAGATACGGGGTTCCAGGAAAGGGGAGGG
GTAGCGGGGGAGGGGGGCTTCAGAAGGGGGGGAACACCCCAGATCTCAGGGAACCCCGCCCCCT
GCCTTTCCCTCTCCCCTAGAAAAGGGGGGGCCGTCTCACCCCCGAGCCCCCTTGGAGACACCCC
CCCTCCCAAAAGCCATGTCCATCCAGCCCTTCGCCCCCAAACCTAGCACAAAACGGGGTTCACA
AGCCATGGTGGGGGTCCGGGGGGACAGAAATGGATTTTCTTGGCAATAAGCGGACTCTGGGACT
CCGGCCCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCCGTAGGGGGAGGGGA
GCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCAACCTCACTGTGCCC
GCCCCGCACCATGCCCCAGCCCCAGGTCTAGCAGGGCCCATCGCAGGGGGCAGCACTTGGGGGC
ATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCCTCGCCTTCTTCCTC
CCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCCCAAGGGGTACCGAGGGGGGCAAGG
GGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTTCCGCAAAACTGTGAGCAAAAAGCAATAGAA
GCCTCGCCCCCGCCCCTCCCCTTCCGCAGAATTCGCCGAGTCTGTAGCCTCCCCATCCCAGTTC
CTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACCCGGGCGGGGGTGTGA
CACCCCGCCCCGGCCCCCGACTCCGTGGTTTCCGTATCGTCAACCCTTCAGCCGCCGACCCGGG
AGGGGTCCGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTCTGCTTGACAATGTAGCAAC
CCCGGCCCCCCACCCACGGTCCTCCCCTTTTTGCTCTCCCTGACAATAAAGTCTGAATTTGTTC
TGCCCTCCGC

hide sequence

RefSeq Acc Id:

XM_008003520 ⟹ XP_008001711

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	11	50,483,975 - 50,507,178 (-)	NCBI
Vero_WHO_p1.0	NW_023666037	195,529,979 - 195,555,262 (+)	NCBI

Sequence:

show sequence

GCTCCTCCCCGGCTCCTCCCCCCGTACCCCCAGCCCGGCCAGAACGGCCCCCGGGACAGAGCGA
CGCGGAACCCCGGGCGCCTGGGTCCCCAGCATGATCCTCGGCAGCCTGAGCCGGGCAGGGCCCC
TGCCTCTGCTACGGCAGCCCCCCATCATGCAGCCCCCGCTGGACCTCAAGCAGATCCTGCCCTT
CCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTACAGCACCAGCCAGGCTGAGGCA
CACTACAAGGGTAACCGCCACGCCCGACGAGTCAAAGGCATTGAGGCCGCCAAGACCAGAGGCA
GGGAGCCTGGCATCCGAGAACCTGGAGACCCAGCCCCCCCAGGCAGCACCCCGACAAATGGGGA
TGGTGTAGCACCCCGTCCAGTTTCCATGGAGAATGGACTGGGGCCAGCCCCAGGATCCCCAGAG
AAACAGCCTGGCTCCCCATCCCCTCCCAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGGTG
AAGGGGGGACTCCAGCCCCAGCTTCCTTGCCTGGGGGTAGCAAGGAAGAGGAGGAGAAAGCCAA
GCGGCTGCTCTACTGTGCTCTGTGCAAGGTGGCTGTGAACTCCCTGTCCCAGCTTGAGGCACAT
AACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCTGGGGCCCATCAAAGCTT
ACCCTCGGCTGGGGCCTCCCACCCCGGGGGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCA
CTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACTGAAACAGCACATCTCCAGCCGG
CGGCACCGAGACGGAGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTAGGG
GCGCCGGGGAGCTGGCGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGG
CCTTCTCCCCAGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCC
CTGCGCCCGGCTCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTCACC
CGGCCCCCGGACCCATCCGAACTGCGCACGGACCCATCCTCTTCTCCCCCTACTGACCTCAACC
CTGAACCCCTCCCATTCAACTCCCCACCTCCAGCCGGGACCCAGGCCTCCGGGCTCCCAGCCCG
CCCCTCCTCCCGGCACTCCCTAAATGATCTCTCCTTCCCCCCCCACCCCGAGATACGGGGTTCC
AGGAAAGGGGAGGGGTAGCGGGGGAGGGGGGCTTCAGAAGGGGGGGAACACCCCAGATCTCAGG
GAACCCCGCCCCCTGCCTTTCCCTCTCCCCTAGAAAAGGGGGGGCCGTCTCACCCCCGAGCCCC
CTTGGAGACACCCCCCCTCCCAAAAGCCATGTCCATCCAGCCCTTCGCCCCCAAACCTAGCACA
AAACGGGGTTCACAAGCCATGGTGGGGGTCCGGGGGGACAGAAATGGATTTTCTTGGCAATAAG
CGGACTCTGGGACTCCGGCCCCCTACCCCAAACTGAAGCGCTTCCGTGAACACCCCCGTCCTCC
GTAGGGGGAGGGGAGCAGGCGGGATCCTGGGTCCCTCATAAGCACTTTGGTTTTACCGCCTGCA
ACCTCACTGTGCCCGCCCCGCACCATGCCCCAGCCCCAGGTCTAGCAGGGCCCATCGCAGGGGG
CAGCACTTGGGGGCATCTCCGGCACTTGGGTGGGACCAAGGAGATGCCACCATAGACCTTTCCC
TCGCCTTCTTCCTCCCTAGTCCGGGTTCCATTCTTTTCACCAGCACCCATCGCCCAAGGGGTAC
CGAGGGGGGCAAGGGGTGTCCAGTCCAAGCCCACCCCCGCCTCGCCTTCCGCAAAACTGTGAGC
AAAAAGCAATAGAAGCCTCGCCCCCGCCCCTCCCCTTCCGCAGAATTCGCCGAGTCTGTAGCCT
CCCCATCCCAGTTCCTAGACCTCATGGCTGTCCCCTCCCACCAGTCACCTCCACTGCACAACCC
GGGCGGGGGTGTGACACCCCGCCCCGGCCCCCGACTCCGTGGTTTCCGTATCGTCAACCCTTCA
GCCGCCGACCCGGGAGGGGTCCGGCCTACACTGGTCTTCCCCTTCCCATCAACTCTTTCTGCTT
GACAATGTAGCAACCCCGGCCCCCCACCCACGGTCCTCCCCTTTTTGCTCTCCCTGACAATAAA
GTCTGAATTTGTTCTGCCCTCCG

hide sequence

RefSeq Acc Id:

XM_037996987 ⟹ XP_037852915

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666037	195,543,236 - 195,555,262 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008001709	(Get FASTA)	NCBI Sequence Viewer
	XP_008001710	(Get FASTA)	NCBI Sequence Viewer
	XP_008001711	(Get FASTA)	NCBI Sequence Viewer
	XP_037852915	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000001716.1

RefSeq Acc Id:	XP_008001710 ⟸ XM_008003519
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_008001711 ⟸ XM_008003520
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_008001709 ⟸ XM_008003518
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSCSAP00000001716 ⟸ ENSCSAT00000003439

RefSeq Acc Id:	XP_037852915 ⟸ XM_037996987
- Peptide Label:	isoform X4

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000005407	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000003439.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Matrin/U1-like-C_Znf_C2H2	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
KEGG Report	csab:103238440	UniProtKB/TrEMBL
NCBI Gene	ZNF385A	ENTREZGENE
PANTHER	DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 385A	UniProtKB/TrEMBL
Pfam	zf-met	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
	ZnF_U1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A0D9QZC7_CHLSB	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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