MLST8 (MTOR associated protein, LST8 homolog)

Gene: MLST8 (MTOR associated protein, LST8 homolog) Chlorocebus sabaeus

Analyze

Symbol:

MLST8

Name:

MTOR associated protein, LST8 homolog

RGD ID:

18482888

Description:

ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); positive regulation of peptidyl-tyrosine phosphorylation (ortholog); positive regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); endometrial carcinoma (ortholog); FOUND IN TORC1 complex (ortholog); TORC2 complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

target of rapamycin complex subunit LST8

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	2,101,044 - 2,105,272 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	2,101,891 - 2,105,739 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	28,956,518 - 28,960,758 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant polycystic kidney disease (ISO)

developmental and epileptic encephalopathy 1 (ISO)

endometrial carcinoma (ISO)

epilepsy (ISO)

idiopathic generalized epilepsy (ISO)

short-rib thoracic dysplasia 9 with or without polydactyly (ISO)

tuberous sclerosis 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of actin filament polymerization (ISO)

positive regulation of peptidyl-tyrosine phosphorylation (ISO)

positive regulation of TOR signaling (ISO)

regulation of actin cytoskeleton organization (IEA)

TOR signaling (IEA)

TORC1 signaling (ISO)

Cellular Component

cytoplasm (IEA)

lysosomal membrane (IEA)

TORC1 complex (IEA,ISO)

TORC2 complex (IEA,ISO)

Molecular Function

protein binding (ISO)

protein serine/threonine kinase activator activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

mTOR signaling pathway (ISO)

phosphatidylinositol 3-kinase-Akt signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

MLST8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	2,101,044 - 2,105,272 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	2,101,891 - 2,105,739 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	28,956,518 - 28,960,758 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

MLST8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	2,205,454 - 2,209,453 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	2,204,248 - 2,209,453 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	2,255,455 - 2,259,454 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	2,195,451 - 2,199,419 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	2,195,495 - 2,199,414	NCBI
Celera	16	2,469,868 - 2,473,835 (+)	NCBI		Celera
Cytogenetic Map	16	p13.3	NCBI
HuRef	16	2,181,357 - 2,185,596 (+)	NCBI		HuRef
CHM1_1	16	2,255,106 - 2,259,344 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	2,227,913 - 2,231,910 (+)	NCBI		T2T-CHM13v2.0

Mlst8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	24,692,524 - 24,698,722 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	24,692,525 - 24,698,052 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	24,473,550 - 24,479,114 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	24,473,551 - 24,479,078 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	24,610,496 - 24,616,023 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	24,201,153 - 24,206,678 (-)	NCBI		MGSCv36	mm8
Celera	17	24,989,327 - 24,994,854 (-)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	12.39	NCBI

Mlst8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	14,002,927 - 14,008,678 (-)	NCBI		GRCr8
mRatBN7.2	10	13,498,377 - 13,504,128 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	13,498,388 - 13,504,128 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	18,244,945 - 18,250,695 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	17,733,790 - 17,739,540 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	13,232,975 - 13,238,725 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	13,839,250 - 13,845,001 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	13,839,250 - 13,845,001 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	13,656,236 - 13,661,987 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	13,725,510 - 13,731,261 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	13,725,520 - 13,731,261 (-)	NCBI
Celera	10	13,178,857 - 13,184,608 (-)	NCBI		Celera
Cytogenetic Map	10	q12	NCBI

Mlst8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955442	15,056,363 - 15,060,300 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955442	15,056,363 - 15,060,300 (-)	NCBI	ChiLan1.0	ChiLan1.0

MLST8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	2,707,554 - 2,712,302 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	6,488,454 - 6,493,202 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	1,063,534 - 1,067,706 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	2,306,451 - 2,310,828 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	2,306,451 - 2,310,828 (+)	Ensembl	panpan1.1		panPan2

MLST8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	38,759,713 - 38,765,556 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	38,762,103 - 38,765,488 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	39,999,004 - 40,004,847 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	39,068,199 - 39,074,042 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	39,068,201 - 39,073,985 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	38,753,209 - 38,759,052 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	38,725,535 - 38,731,378 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	39,204,256 - 39,210,099 (-)	NCBI		UU_Cfam_GSD_1.0

Mlst8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	104,859,878 - 104,872,523 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936694	1,834,701 - 1,842,719 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936694	1,839,135 - 1,849,307 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MLST8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	39,778,754 - 39,788,285 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	39,778,746 - 39,786,206 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	42,394,842 - 42,398,552 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Mlst8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624913	47,962 - 55,048 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624913	50,622 - 54,643 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium	36		46
Low		20	14
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007982446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_007982472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000008967 ⟹ ENSCSAP00000007097

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	5	2,101,891 - 2,105,739 (+)	Ensembl

RefSeq Acc Id:

XM_007982446 ⟹ XP_007980637

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,101,044 - 2,105,272 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,956,518 - 28,960,727 (-)	NCBI

Sequence:

show sequence

GGGTCACGGAGGGCACGGGAACGGCGCGACCCGACAGCCTGGGAAACGGACAGCCGTGTCAGAA
GGGCAGGTGCCAGTGGGGAGGAGGCCGGAGAGAAAACTGCAGCTTCCTTCCACCTCGCGCCGGG
CCCGCGGCCGCGCAAGGAACCTCTCCGGGTTCCCCCCGGCGGGAACCCCCTGCCCCAGAACTTT
GGTCTCGTCCCATCCACCCCCGCCCGCGCCATGGTCTCGCCCTAGGGAGTTATCGATAACTCTA
CGCTCGACCTCGATCGACTCGCTCCGGCTCCCCGCGCCGTCCTGGACACAGCGGAGTGCGGAGT
CGCCCGTAAGATGCCCTGATCTTTGACCCCTGCCATTCAGCTCTAGGGCCCGTGCAGGCCACAC
CATGAACACGTCCCCAGGCACGGTGGGCAGTGACCCGGTCATCCTGGCCACTGCAGGCTACGAC
CACACCGTGCGCTTCTGGCAGGCCCACAGCGGCATCTGCACCCGGACTGTGCAGCACCAGGACT
CTCAGGTGAATGCCTTGGAGATCACACCAGACCGCAGTATGATTGCTGCTGCAGGTTACCAGCA
CATCCGCATGTATGATCTCAACTCCAATAACCCCAACCCCATCATCAGCTATGATGGCGTCAAC
AAGAACATCGCATCTGTGGGCTTCCACGAAGACGGCCGCTGGATGTACACGGGTGGCGAGGACT
GCACAGCCAGGATCTGGGACCTCAGGTCCCGGAACCTGCAGTGCCAGCGGATCTTCCAAGTGAA
CGCACCCATTAACTGCGTGTGCCTGCACCCCAACCAGGCAGAGCTCATCGTGGGTGACCAGAGC
GGGGCTATCCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTGATCCCCGAGCCTGAGG
TCTCCATCACGTCTGCCCACATTGACCCCGACGCCAGCTACATGGCAGCCGTCAATAGCGCTGG
AAACTGCTATGTCTGGAATCTGACGGGGGGCATTGGTGACGAGGTAACCCAGCTCATCCCCAAG
ACCAAGATCCCAGCCCACACGCGCTACGCCCTGCAGTGCCGCTTCAGCCCCGACTCCACGCTCC
TCGCCACCTGCTCGGCTGATCAGACGTGCAAGATCTGGAGGACGTCCAACTTCTCCCTGATGAC
GGAGCTGAGCATCAAAAGTGGCAACCCCGGGGAGTCTTCCCGTGGTTGGATGTGGGGCTGCGCT
TTCTCGGGGGACTCCCAGTATATCGTCACTGCTTCCTCGGACAACCTGGCCCGGCTCTGGTGTG
TGGAGACTGGAGAGATCAAGAGAGAGTATGGCGGCCACCAGAAGGCTGTCGTCTGCCTGGCGTT
CAACGACAGTGTGCTGGGCTAGCCTGTGACCCCTCGGGACTGCCTGGTGTAGGTGGTGGCAGCT
GGAGGGTCCCATGCAGCACCCAGGTCAGAACAGGCCCTACTGCCGGCCTACGCCAGCTGGACCT
GATGGCCCCCTGTGGCACCTTGACCTGCTGGGCCAGGCCGCCCTGGGACTCTCAGCCCCCAGTT
GCTTATCCAAGTGTGACAGCTCAACCCAAGCCAGGCTGCACACTCCTGGACTGGGCTAGCCTGC
ACTGCCTGGGAAAGTCAGCCGAGGGCCCAAAGCTGCTGAGGGCCCAAAGCTGCTGAGGGGTCTG
AGGCTGGTGCCCACCCCCAAGTTAGTGTGTTTCCTGTCCCCTCCCTGCCGCGTTTCAGGGCCTT
AGTCCACAGAGAACACCACCGTGGCCAGGTGGAAGGGTTTATTAGTCCCTGCCGGCAGCTGTCC
TCCCTGGTGCGGGTGACCTGGCTAGCCCGCTGGACTGGGGACAGGGACCGGGCTGGGCCAGGTC
GGGGCTCAGTCTGGGAGGTAATAAAAGCAGACTGACACACAGA

hide sequence

RefSeq Acc Id:

XM_007982456 ⟹ XP_007980647

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,101,409 - 2,105,272 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,956,518 - 28,960,330 (-)	NCBI

Sequence:

show sequence

GCTGGGTGGCTGGGAGAATACGGCCAGGGGAAGCCGGCCAGCAGGACGGAGAAAGGGCGGTCGG
CGGAGGACAGGGGAGCTCGGGGGTCCAGCCAGACTGCGCCCCTTCCCATCACGGCCCGCCGCCG
GCCCGCTACGCATGCGCAGCCGCAGGGCTCGGCTTTCCCCGGCCCATCCGCCGCCTTGCGCACG
CGCAGCCCGCTCCTGCGGCAGAGTGGCGCCCGCGCGTGACTGCCCCCTGCCGGCTGCGGGGGGG
ACGGCGCCCCCGCCGGGTGCATGGGGCGGGGATGGAGCACGCGCCCTGGAGCCCCGGAGCCGCC
CGGAGCCGGGTGTCACGCGTGTGACGCGTGTCCCTGAACCTACCTCCGCTTGTTGTCCCAACTC
TAAATTGGGAATGATGCCCTGATCTTTGACCCCTGCCATTCAGCTCTAGGGCCCGTGCAGGCCA
CACCATGAACACGTCCCCAGGCACGGTGGGCAGTGACCCGGTCATCCTGGCCACTGCAGGCTAC
GACCACACCGTGCGCTTCTGGCAGGCCCACAGCGGCATCTGCACCCGGACTGTGCAGCACCAGG
ACTCTCAGGTGAATGCCTTGGAGATCACACCAGACCGCAGTATGATTGCTGCTGCAGGTTACCA
GCACATCCGCATGTATGATCTCAACTCCAATAACCCCAACCCCATCATCAGCTATGATGGCGTC
AACAAGAACATCGCATCTGTGGGCTTCCACGAAGACGGCCGCTGGATGTACACGGGTGGCGAGG
ACTGCACAGCCAGGATCTGGGACCTCAGGTCCCGGAACCTGCAGTGCCAGCGGATCTTCCAAGT
GAACGCACCCATTAACTGCGTGTGCCTGCACCCCAACCAGGCAGAGCTCATCGTGGGTGACCAG
AGCGGGGCTATCCACATCTGGGACTTGAAAACAGACCACAACGAGCAGCTGATCCCCGAGCCTG
AGGTCTCCATCACGTCTGCCCACATTGACCCCGACGCCAGCTACATGGCAGCCGTCAATAGCGC
TGGAAACTGCTATGTCTGGAATCTGACGGGGGGCATTGGTGACGAGGTAACCCAGCTCATCCCC
AAGACCAAGATCCCAGCCCACACGCGCTACGCCCTGCAGTGCCGCTTCAGCCCCGACTCCACGC
TCCTCGCCACCTGCTCGGCTGATCAGACGTGCAAGATCTGGAGGACGTCCAACTTCTCCCTGAT
GACGGAGCTGAGCATCAAAAGTGGCAACCCCGGGGAGTCTTCCCGTGGTTGGATGTGGGGCTGC
GCTTTCTCGGGGGACTCCCAGTATATCGTCACTGCTTCCTCGGACAACCTGGCCCGGCTCTGGT
GTGTGGAGACTGGAGAGATCAAGAGAGAGTATGGCGGCCACCAGAAGGCTGTCGTCTGCCTGGC
GTTCAACGACAGTGTGCTGGGCTAGCCTGTGACCCCTCGGGACTGCCTGGTGTAGGTGGTGGCA
GCTGGAGGGTCCCATGCAGCACCCAGGTCAGAACAGGCCCTACTGCCGGCCTACGCCAGCTGGA
CCTGATGGCCCCCTGTGGCACCTTGACCTGCTGGGCCAGGCCGCCCTGGGACTCTCAGCCCCCA
GTTGCTTATCCAAGTGTGACAGCTCAACCCAAGCCAGGCTGCACACTCCTGGACTGGGCTAGCC
TGCACTGCCTGGGAAAGTCAGCCGAGGGCCCAAAGCTGCTGAGGGCCCAAAGCTGCTGAGGGGT
CTGAGGCTGGTGCCCACCCCCAAGTTAGTGTGTTTCCTGTCCCCTCCCTGCCGCGTTTCAGGGC
CTTAGTCCACAGAGAACACCACCGTGGCCAGGTGGAAGGGTTTATTAGTCCCTGCCGGCAGCTG
TCCTCCCTGGTGCGGGTGACCTGGCTAGCCCGCTGGACTGGGGACAGGGACCGGGCTGGGCCAG
GTCGGGGCTCAGTCTGGGAGGTAATAAAAGCAGACTGACACACAGA

hide sequence

RefSeq Acc Id:

XM_007982464 ⟹ XP_007980655

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,101,044 - 2,105,272 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,956,518 - 28,960,758 (-)	NCBI

Sequence:

show sequence

GGGTCACGGAGGGCACGGGAACGGCGCGACCCGACAGCCTGGGAAACGGACAGCCGTGTCAGAA
GGGCAGGTGCCAGTGGGGAGGAGGCCGGAGAGAAAACTGCAGCTTCCTTCCACCTCGCGCCGGG
CCCGCGGCCGCGCAAGGAACCTCTCCGGGTTCCCCCCGGCGGGAACCCCCTGCCCCAGAACTTT
GGTCTCGTCCCATCCACCCCCGCCCGCGCCATGGTCTCGCCCTAGGGAGTTATCGATAACTCTA
CGCTCGACCTCGATCGACTCGCTCCGGCTCCCCGCGCCGTCCTGGACACAGCGGAGTGCGGAGT
CGCCCGTAAGCTCTAGGGCCCGTGCAGGCCACACCATGAACACGTCCCCAGGCACGGTGGGCAG
TGACCCGGTCATCCTGGCCACTGCAGGCTACGACCACACCGTGCGCTTCTGGCAGGCCCACAGC
GGCATCTGCACCCGGACTGTGCAGCACCAGGACTCTCAGGTGAATGCCTTGGAGATCACACCAG
ACCGCAGTATGATTGCTGCTGCAGGTTACCAGCACATCCGCATGTATGATCTCAACTCCAATAA
CCCCAACCCCATCATCAGCTATGATGGCGTCAACAAGAACATCGCATCTGTGGGCTTCCACGAA
GACGGCCGCTGGATGTACACGGGTGGCGAGGACTGCACAGCCAGGATCTGGGACCTCAGGTCCC
GGAACCTGCAGTGCCAGCGGATCTTCCAAGTGAACGCACCCATTAACTGCGTGTGCCTGCACCC
CAACCAGGCAGAGCTCATCGTGGGTGACCAGAGCGGGGCTATCCACATCTGGGACTTGAAAACA
GACCACAACGAGCAGCTGATCCCCGAGCCTGAGGTCTCCATCACGTCTGCCCACATTGACCCCG
ACGCCAGCTACATGGCAGCCGTCAATAGCGCTGGAAACTGCTATGTCTGGAATCTGACGGGGGG
CATTGGTGACGAGGTAACCCAGCTCATCCCCAAGACCAAGATCCCAGCCCACACGCGCTACGCC
CTGCAGTGCCGCTTCAGCCCCGACTCCACGCTCCTCGCCACCTGCTCGGCTGATCAGACGTGCA
AGATCTGGAGGACGTCCAACTTCTCCCTGATGACGGAGCTGAGCATCAAAAGTGGCAACCCCGG
GGAGTCTTCCCGTGGTTGGATGTGGGGCTGCGCTTTCTCGGGGGACTCCCAGTATATCGTCACT
GCTTCCTCGGACAACCTGGCCCGGCTCTGGTGTGTGGAGACTGGAGAGATCAAGAGAGAGTATG
GCGGCCACCAGAAGGCTGTCGTCTGCCTGGCGTTCAACGACAGTGTGCTGGGCTAGCCTGTGAC
CCCTCGGGACTGCCTGGTGTAGGTGGTGGCAGCTGGAGGGTCCCATGCAGCACCCAGGTCAGAA
CAGGCCCTACTGCCGGCCTACGCCAGCTGGACCTGATGGCCCCCTGTGGCACCTTGACCTGCTG
GGCCAGGCCGCCCTGGGACTCTCAGCCCCCAGTTGCTTATCCAAGTGTGACAGCTCAACCCAAG
CCAGGCTGCACACTCCTGGACTGGGCTAGCCTGCACTGCCTGGGAAAGTCAGCCGAGGGCCCAA
AGCTGCTGAGGGCCCAAAGCTGCTGAGGGGTCTGAGGCTGGTGCCCACCCCCAAGTTAGTGTGT
TTCCTGTCCCCTCCCTGCCGCGTTTCAGGGCCTTAGTCCACAGAGAACACCACCGTGGCCAGGT
GGAAGGGTTTATTAGTCCCTGCCGGCAGCTGTCCTCCCTGGTGCGGGTGACCTGGCTAGCCCGC
TGGACTGGGGACAGGGACCGGGCTGGGCCAGGTCGGGGCTCAGTCTGGGAGGTAATAAAAGCAG
ACTGACACACAGA

hide sequence

RefSeq Acc Id:

XM_007982472 ⟹ XP_007980663

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	5	2,101,409 - 2,105,105 (+)	NCBI
Vero_WHO_p1.0	NW_023666068	28,956,518 - 28,960,016 (-)	NCBI

Sequence:

show sequence

GCTGGGTGGCTGGGAGAATACGGCCAGGGGAAGCCGGCCAGCAGGACGGAGAAAGGGCGGTCGG
CGGAGGACAGGGGAGCTCGGGGGTCCAGCCAGACTGCGCCCCTTCCCATCACGGCCCGCCGCCG
GCCCGCTACGCATGCGCAGCCGCAGGGCTCGGCTTTCCCCGGCCCATCCGCCGCCTTGCGCACG
CGCAGCCCGCTCCTGCGGCAGAGTGGCGCCCGCGCGTGACTGCCCCCTGCCGGCTGCGGGGGGG
ACGGCGCCCCCGCCGGGTGCATGGGGCGGGGATGGAGCACGCGCCCTGGAGCCCCGGAGCCGCC
CGGAGCCGGGTGTCACGCGTGTGACGCGTGTCCCTGAACCTACCTCCGCTTGTTGTCCCAACTC
TAAATTGGGAATGCTCTAGGGCCCGTGCAGGCCACACCATGAACACGTCCCCAGGCACGGTGGG
CAGTGACCCGGTCATCCTGGCCACTGCAGGCTACGACCACACCGTGCGCTTCTGGCAGGCCCAC
AGCGGCATCTGCACCCGGACTGTGCAGCACCAGGACTCTCAGGTGAATGCCTTGGAGATCACAC
CAGACCGCAGTATGATTGCTGCTGCAGGTTACCAGCACATCCGCATGTATGATCTCAACTCCAA
TAACCCCAACCCCATCATCAGCTATGATGGCGTCAACAAGAACATCGCATCTGTGGGCTTCCAC
GAAGACGGCCGCTGGATGTACACGGGTGGCGAGGACTGCACAGCCAGGATCTGGGACCTCAGGT
CCCGGAACCTGCAGTGCCAGCGGATCTTCCAAGTGAACGCACCCATTAACTGCGTGTGCCTGCA
CCCCAACCAGGCAGAGCTCATCGTGGGTGACCAGAGCGGGGCTATCCACATCTGGGACTTGAAA
ACAGACCACAACGAGCAGCTGATCCCCGAGCCTGAGGTCTCCATCACGTCTGCCCACATTGACC
CCGACGCCAGCTACATGGCAGCCGTCAATAGCGCTGGAAACTGCTATGTCTGGAATCTGACGGG
GGGCATTGGTGACGAGGTAACCCAGCTCATCCCCAAGACCAAGATCCCAGCCCACACGCGCTAC
GCCCTGCAGTGCCGCTTCAGCCCCGACTCCACGCTCCTCGCCACCTGCTCGGCTGATCAGACGT
GCAAGATCTGGAGGACGTCCAACTTCTCCCTGATGACGGAGCTGAGCATCAAAAGTGGCAACCC
CGGGGAGTCTTCCCGTGGTTGGATGTGGGGCTGCGCTTTCTCGGGGGACTCCCAGTATATCGTC
ACTGCTTCCTCGGACAACCTGGCCCGGCTCTGGTGTGTGGAGACTGGAGAGATCAAGAGAGAGT
ATGGCGGCCACCAGAAGGCTGTCGTCTGCCTGGCGTTCAACGACAGTGTGCTGGGCTAGCCTGT
GACCCCTCGGGACTGCCTGGTGTAGGTGGTGGCAGCTGGAGGGTCCCATGCAGCACCCAGGTCA
GAACAGGCCCTACTGCCGGCCTACGCCAGCTGGACCTGATGGCCCCCTGTGGCACCTTGACCTG
CTGGGCCAGGCCGCCCTGGGACTCTCAGCCCCCAGTTGCTTATCCAAGTGTGACAGCTCAACCC
AAGCCAGGCTGCACACTCCTGGACTGGGCTAGCCTGCACTGCCTGGGAAAGTCAGCCGAGGGCC
CAAAGCTGCTGAGGGCCCAAAGCTGCTGAGGGGTCTGAGGCTGGTGCCCACCCCCAAGTTAGTG
TGTTTCCTGTCCCCTCCCTGCCGCGTTTCAGGGCCTTAGTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_007980637	(Get FASTA)	NCBI Sequence Viewer
	XP_007980647	(Get FASTA)	NCBI Sequence Viewer
	XP_007980655	(Get FASTA)	NCBI Sequence Viewer
	XP_007980663	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000007097
	ENSCSAP00000007097.1

RefSeq Acc Id:	XP_007980637 ⟸ XM_007982446
- UniProtKB:	A0A0D9REQ8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007980655 ⟸ XM_007982464
- UniProtKB:	A0A0D9REQ8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007980647 ⟸ XM_007982456
- UniProtKB:	A0A0D9REQ8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007980663 ⟸ XM_007982472
- UniProtKB:	A0A0D9REQ8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCSAP00000007097 ⟸ ENSCSAT00000008967

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000010878	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000008967.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
InterPro	G-protein_beta_WD-40_rep	UniProtKB/TrEMBL
	MLST8	UniProtKB/TrEMBL
	Quinoprotein_ADH-like_supfam	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
	WD40_repeat	UniProtKB/TrEMBL
	WD40_repeat_CS	UniProtKB/TrEMBL
KEGG Report	csab:103226678	UniProtKB/TrEMBL
NCBI Gene	MLST8	ENTREZGENE
PANTHER	PTHR19842	UniProtKB/TrEMBL
	TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8	UniProtKB/TrEMBL
Pfam	WD40	UniProtKB/TrEMBL
PRINTS	GPROTEINBRPT	UniProtKB/TrEMBL
PROSITE	WD_REPEATS_1	UniProtKB/TrEMBL
	WD_REPEATS_2	UniProtKB/TrEMBL
	WD_REPEATS_REGION	UniProtKB/TrEMBL
SMART	WD40	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50998	UniProtKB/TrEMBL
UniProt	A0A0D9REQ8	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

RGD Manual Annotations

Imported Annotations - PID (archival)