HECA (hdc homolog, cell cycle regulator) - Rat Genome Database

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Gene: HECA (hdc homolog, cell cycle regulator) Chlorocebus sabaeus
Analyze
Symbol: HECA
Name: hdc homolog, cell cycle regulator
RGD ID: 18473092
Description: INVOLVED IN negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Familial Behcet-Like Autoinflammatory Syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: headcase protein homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11334,205,005 - 34,250,779 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660406,350,815 - 6,396,617 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (ISO)
nucleus  (ISO)

References

Genomics

Comparative Map Data
HECA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11334,205,005 - 34,250,779 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660406,350,815 - 6,396,617 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
HECA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386139,135,080 - 139,180,802 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6139,135,080 - 139,180,802 (+)EnsemblGRCh38hg38GRCh38
GRCh376139,456,217 - 139,501,939 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366139,497,942 - 139,543,639 (+)NCBINCBI36Build 36hg18NCBI36
Build 346139,497,941 - 139,543,630NCBI
Celera6140,196,318 - 140,242,007 (+)NCBICelera
Cytogenetic Map6q24.1NCBI
HuRef6137,017,966 - 137,063,661 (+)NCBIHuRef
CHM1_16139,719,415 - 139,765,096 (+)NCBICHM1_1
T2T-CHM13v2.06140,323,625 - 140,369,329 (+)NCBIT2T-CHM13v2.0
Heca
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391017,774,788 - 17,823,785 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1017,744,360 - 17,823,815 (-)EnsemblGRCm39 Ensembl
GRCm381017,899,040 - 17,948,067 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1017,868,612 - 17,948,067 (-)EnsemblGRCm38mm10GRCm38
MGSCv371017,620,272 - 17,667,873 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361017,589,882 - 17,637,483 (-)NCBIMGSCv36mm8
Celera1017,796,891 - 17,812,404 (-)NCBICelera
Cytogenetic Map10A3NCBI
cM Map107.31NCBI
Heca
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8114,345,306 - 14,395,226 (-)NCBIGRCr8
mRatBN7.2112,525,445 - 12,575,358 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl112,525,135 - 12,576,427 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx112,297,510 - 12,311,261 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.011,262,708 - 1,276,459 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0112,505,476 - 12,519,257 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0113,036,909 - 13,050,644 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl113,036,909 - 13,050,644 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0114,730,556 - 14,744,291 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4112,933,861 - 12,947,642 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1112,937,222 - 12,983,495 (-)NCBI
Celera110,982,933 - 10,996,714 (-)NCBICelera
Cytogenetic Map1p12NCBI
Heca
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543620,523,215 - 20,568,621 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543620,523,215 - 20,569,403 (-)NCBIChiLan1.0ChiLan1.0
HECA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25159,103,549 - 159,149,260 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16156,998,402 - 157,042,983 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06136,898,465 - 136,943,055 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16141,008,515 - 141,021,150 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6141,008,515 - 141,021,150 (+)Ensemblpanpan1.1panPan2
HECA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1131,332,915 - 31,383,688 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl131,363,008 - 31,373,277 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha132,205,754 - 32,257,065 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0131,493,231 - 31,544,548 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl131,492,489 - 31,665,998 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1131,369,117 - 31,413,471 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0131,251,605 - 31,295,973 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0131,563,102 - 31,614,407 (+)NCBIUU_Cfam_GSD_1.0
Heca
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946126,344,690 - 126,431,119 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365606,165,459 - 6,210,357 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365606,165,465 - 6,210,335 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HECA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl125,316,456 - 25,364,297 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1125,316,448 - 25,364,083 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2128,516,816 - 28,531,163 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Heca
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475314,798,487 - 14,849,370 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008006847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JACDXN010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_008006847   ⟹   XP_008005038
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11334,205,005 - 34,250,779 (-)NCBI
Vero_WHO_p1.0NW_0236660406,350,815 - 6,396,617 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008005038 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_008005038   ⟸   XM_008006847


Additional Information

Database Acc Id Source(s)
NCBI Gene HECA ENTREZGENE