ZNF207 (zinc finger protein 207) - Rat Genome Database

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Gene: ZNF207 (zinc finger protein 207) Chlorocebus sabaeus
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Symbol: ZNF207
Name: zinc finger protein 207
RGD ID: 18408895
Description: ENCODES a protein that exhibits heparin binding (inferred); metal ion binding (inferred); microtubule binding (inferred); INVOLVED IN attachment of spindle microtubules to kinetochore (inferred); mitotic sister chromatid segregation (inferred); mitotic spindle assembly (inferred); FOUND IN kinetochore (inferred); nucleolus (inferred); nucleoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: BUB3-interacting and GLEBS motif-containing protein ZNF207
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11625,918,182 - 25,948,477 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1625,918,165 - 25,941,560 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660754,095,608 - 4,127,734 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF207
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11625,918,182 - 25,948,477 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1625,918,165 - 25,941,560 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660754,095,608 - 4,127,734 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ZNF207
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381732,350,157 - 32,381,885 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1732,350,132 - 32,381,885 (+)EnsemblGRCh38hg38GRCh38
GRCh371730,677,176 - 30,708,904 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361727,701,270 - 27,721,581 (+)NCBINCBI36Build 36hg18NCBI36
Build 341727,701,297 - 27,721,581NCBI
Celera1727,587,373 - 27,607,677 (+)NCBICelera
Cytogenetic Map17q11.2NCBI
HuRef1726,863,931 - 26,884,226 (+)NCBIHuRef
CHM1_11730,739,649 - 30,759,964 (+)NCBICHM1_1
T2T-CHM13v2.01733,295,928 - 33,327,660 (+)NCBIT2T-CHM13v2.0
Zfp207
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391180,274,105 - 80,299,387 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1180,274,105 - 80,296,559 (+)EnsemblGRCm39 Ensembl
GRCm381180,383,279 - 80,408,561 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1180,383,279 - 80,405,733 (+)EnsemblGRCm38mm10GRCm38
MGSCv371180,196,781 - 80,209,750 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361180,199,541 - 80,212,332 (+)NCBIMGSCv36mm8
Celera1190,020,650 - 90,033,619 (+)NCBICelera
Cytogenetic Map11B5NCBI
cM Map1147.83NCBI
Zfp207
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81065,883,630 - 65,895,895 (+)NCBIGRCr8
mRatBN7.21065,385,807 - 65,398,086 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1065,385,740 - 65,397,386 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1070,014,000 - 70,026,284 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01069,519,314 - 69,531,597 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01064,981,350 - 64,993,770 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01067,762,970 - 67,784,854 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1067,762,995 - 67,774,787 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01067,418,642 - 67,440,272 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41068,613,434 - 68,625,197 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11068,627,027 - 68,639,308 (+)NCBI
Celera1064,344,553 - 64,356,322 (+)NCBICelera
Cytogenetic Map10q26NCBI
Znf207
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554817,307,521 - 7,328,198 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554817,307,520 - 7,325,591 (+)NCBIChiLan1.0ChiLan1.0
ZNF207
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21932,086,659 - 32,106,904 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11733,955,086 - 33,986,713 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01724,405,632 - 24,425,868 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11724,693,863 - 24,714,296 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1724,690,903 - 24,714,628 (-)Ensemblpanpan1.1panPan2
LOC100687713
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1111,027,387 - 1,029,505 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha111,087,602 - 1,089,241 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.011996,594 - 998,233 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.111949,719 - 951,358 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0111,047,711 - 1,049,353 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0111,287,677 - 1,289,319 (+)NCBIUU_Cfam_GSD_1.0
Znf207
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560239,645,891 - 39,663,264 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365382,523,839 - 2,541,183 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365382,514,772 - 2,541,198 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF207
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1242,576,532 - 42,612,396 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11242,576,534 - 42,602,789 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21244,344,356 - 44,362,595 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Znf207
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624875434,087 - 453,932 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624875434,770 - 463,977 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 36 20 60
Low
Below cutoff

Sequence


RefSeq Acc Id: ENSCSAT00000004417   ⟹   ENSCSAP00000002669
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl1625,918,165 - 25,941,560 (+)Ensembl
RefSeq Acc Id: XM_008010988   ⟹   XP_008009179
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11625,918,182 - 25,938,861 (+)NCBI
Vero_WHO_p1.0NW_0236660754,106,724 - 4,127,734 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008010989   ⟹   XP_008009180
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11625,918,182 - 25,938,861 (+)NCBI
Vero_WHO_p1.0NW_0236660754,106,722 - 4,127,734 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008010990   ⟹   XP_008009181
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11625,918,182 - 25,938,861 (+)NCBI
Vero_WHO_p1.0NW_0236660754,106,724 - 4,127,734 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008010992   ⟹   XP_008009183
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11625,918,182 - 25,938,861 (+)NCBI
Vero_WHO_p1.0NW_0236660754,106,724 - 4,127,734 (-)NCBI
Sequence:
RefSeq Acc Id: XM_037992660   ⟹   XP_037848588
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660754,106,724 - 4,127,734 (-)NCBI
RefSeq Acc Id: XR_005238556
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660754,095,608 - 4,127,734 (-)NCBI
RefSeq Acc Id: XR_005238557
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_0236660754,095,608 - 4,127,734 (-)NCBI
RefSeq Acc Id: XR_500827
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11625,918,182 - 25,948,477 (+)NCBI
Vero_WHO_p1.0NW_0236660754,095,608 - 4,127,734 (-)NCBI
Sequence:
RefSeq Acc Id: XR_500828
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.11625,918,182 - 25,948,477 (+)NCBI
Vero_WHO_p1.0NW_0236660754,095,608 - 4,127,734 (-)NCBI
Sequence:
RefSeq Acc Id: XP_008009179   ⟸   XM_008010988
- Peptide Label: isoform X1
- UniProtKB: A0A0D9R230 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008009180   ⟸   XM_008010989
- Peptide Label: isoform X1
- UniProtKB: A0A0D9R230 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008009183   ⟸   XM_008010992
- Peptide Label: isoform X3
RefSeq Acc Id: XP_008009181   ⟸   XM_008010990
- Peptide Label: isoform X2
RefSeq Acc Id: ENSCSAP00000002669   ⟸   ENSCSAT00000004417
RefSeq Acc Id: XP_037848588   ⟸   XM_037992660
- Peptide Label: isoform X4


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000006379 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000004417.1 UniProtKB/TrEMBL
InterPro Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report csab:103242694 UniProtKB/TrEMBL
NCBI Gene ZNF207 ENTREZGENE
PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 207 UniProtKB/TrEMBL
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
UniProt A0A0D9R230 ENTREZGENE, UniProtKB/TrEMBL