MND1 (meiotic nuclear divisions 1)

Gene: MND1 (meiotic nuclear divisions 1) Chlorocebus sabaeus

Analyze

Symbol:

MND1

Name:

meiotic nuclear divisions 1

RGD ID:

18368434

Description:

ENCODES a protein that exhibits double-stranded DNA binding (inferred); INVOLVED IN homologous chromosome pairing at meiosis (inferred); meiotic cell cycle (inferred); reciprocal meiotic recombination (inferred); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

meiotic nuclear division protein 1 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	99,892,586 - 99,968,931 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	99,893,342 - 99,968,692 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	79,547,091 - 79,621,203 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

homologous chromosome pairing at meiosis (IEA)

meiotic cell cycle (IEA)

reciprocal meiotic recombination (IEA)

Cellular Component

nucleus (IEA)

Molecular Function

double-stranded DNA binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

MND1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	99,892,586 - 99,968,931 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	99,893,342 - 99,968,692 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	79,547,091 - 79,621,203 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

MND1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	153,344,649 - 153,415,118 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	153,344,649 - 153,415,118 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	154,265,801 - 154,336,270 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	154,485,251 - 154,555,693 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	4	151,590,328 - 151,660,770 (+)	NCBI		Celera
Cytogenetic Map	4	q31.3	NCBI
HuRef	4	149,996,006 - 150,066,618 (+)	NCBI		HuRef
CHM1_1	4	154,244,183 - 154,314,623 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	4	156,669,078 - 156,739,559 (+)	NCBI		T2T-CHM13v2.0

Mnd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	83,995,240 - 84,063,084 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	83,995,240 - 84,063,093 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	84,087,933 - 84,155,798 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	84,087,933 - 84,155,786 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	83,891,856 - 83,959,708 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	84,173,861 - 84,241,622 (-)	NCBI		MGSCv36	mm8
Celera	3	84,108,589 - 84,171,503 (-)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	37.46	NCBI

Mnd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	171,731,523 - 171,794,124 (-)	NCBI		GRCr8
mRatBN7.2	2	169,433,523 - 169,496,081 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	169,433,540 - 169,496,096 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	176,612,101 - 176,675,873 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	174,632,034 - 174,695,806 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	169,233,509 - 169,297,291 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	183,073,029 - 183,140,768 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	183,073,187 - 183,128,932 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	202,485,399 - 202,552,927 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	175,841,810 - 175,906,450 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	175,791,917 - 175,856,556 (-)	NCBI
Celera	2	163,433,751 - 163,496,547 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Mnd1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955471	7,706,346 - 7,760,031 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955471	7,701,962 - 7,768,941 (+)	NCBI	ChiLan1.0	ChiLan1.0

MND1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	151,232,243 - 151,302,727 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	151,587,522 - 151,658,123 (+)	NCBI		NHGRI_mPanPan1

MND1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	51,151,794 - 51,214,736 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	51,125,238 - 51,214,597 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	51,495,043 - 51,557,988 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	51,835,320 - 51,898,268 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	15	51,090,994 - 51,153,923 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	51,196,002 - 51,259,115 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	51,507,612 - 51,570,863 (+)	NCBI		UU_Cfam_GSD_1.0

Mnd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405301	39,281,725 - 39,341,783 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936576	210,727 - 265,110 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936576	210,733 - 265,110 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MND1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	75,689,845 - 75,755,768 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	75,680,604 - 75,755,811 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	80,171,639 - 80,247,040 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Mnd1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624858	4,667,271 - 4,718,073 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	endocrine system	hemolymphoid system	nervous system
High
Medium
Low	36	17	49
Below cutoff		3	10

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008000030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008000031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037992995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_037993000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JACDXN010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCSAT00000001324 ⟹ ENSCSAP00000014752

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	7	99,893,342 - 99,968,692 (+)	Ensembl

RefSeq Acc Id:

XM_008000030 ⟹ XP_007998221

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	7	99,892,586 - 99,968,931 (+)	NCBI
Vero_WHO_p1.0	NW_023666037	79,547,091 - 79,621,203 (+)	NCBI

Sequence:

show sequence

GATTACAGGTGTGAGCCACTGCGCCGGGCCGTACTTCTTACACCTAAAACTGGTTCAAAACACC
ATATAATAATTTTGAAAATTGAATTCTCAGTGAAATGTTTTCAGCACTTTCAGGGGCCTGAGTT
TTTGCTCTGAATCTGCATCTATTCTCAAGCCATGAAGTAGCGTATTTTTGACCATTTTGATTCG
AAATTAATTCCGTTGTTTCCTTCTTTTTTAAAACCTAAGGGAAAAACAGACATACACAGGATGT
GAAAAGCTGGAAAGCAGTGGGTAGCGGCTGGGGGAGATGATGAGAGGTCAGATTAGAGGACAGA
TTAGAAGAAAGGAATCTAGTCCGCCCCAGACGAGACAAATCCGCAAGGATGGAGGAAGCATTTA
CTTCCTCAGCAGCCTAAAACGCCTCTATTTTTTAAATCCAAACTTAGGCCAGATTTCTGCGGCG
CCAAGAAAACGCAGTAAAAGCAAAAGCAAGATGTCCTTTAAAAAAAAAAAAAAAAAAGTCACAT
TCACAGAATACCGAGGAGACGGATGCAGCTCTGTAATCGGTCGGGTGAGACGCGGACAAGCTCC
CCCCGCCCCGGCCTCAGGCCCGCGCCCCTTCCCCCGCCGGCTGTTCGGATGGGCCGCTAGGGGT
CGCTGCGGGCCGCGCGTCCGAGGACCGGCCTCCTCCCCCACCTTCTCGGTCTCGCTGCTCCGCC
CCCGCCGTGTCGGCGGCGCCAAAATCAAACGCGCCCTGGTCTGCCCCGCCCCTCGCCCCTCGCC
CAACGCGCAGGCCCAGCCAGCGGAATCCCCGGCGCCCGCGCCATGTCAAAGAAAAAAGGACTGA
GTGCAGAAGAAAAGAGAACTCGCATGATGGAAATATTTTTTGAAACAAAAGATGTGTTTCAATT
AAAAGACTTGGAGAAGATTGCTCCCAAAGAGAAAGGCATTACTGCTATGTCAGTAAAAGAAGTC
CTTCAGAGCTTAGTTGATGATGGTATGGTTGACTGTGAGAGGATCGGAACTTCTAATTATTATT
GGGCTTTTCCAAGTAAAGCTCTTCATGCAAGGAAACGTAAATTGGAGGTTCTGGAATCTCAGTT
GTCTGAGGGAAGCCAAAAGCATGCAAGCCTGCAGAAAAGCATTGAAAAAGCTAAAATTGGCCGA
TGTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGACCAAAGGGAAC
AGCTAAAGGCAGAAGTAGAAAAATACAAAGATTGTGATCCACAAGTCGTGGAAGAAATACGCCA
AGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACTGATAACATATTTGCAATAAAATCT
TGGGCCAAAAGAAAATTTGGGTTTGAAGAAAATAAAATTGATAAAACTTTTGGAATTCCAGAAG
ACTTGGACTACATAGACTAAAATATTCCATGGTGGTGAAGGATCTACAAGTTTGTGAATATGTA
AATTTTAAACTATTATCTAACTAAGTGTACTGAATTGTCATTTGCCTGAAACTGTATTTATCAT
TTTATTAATGTTAAATAAAGTGTAAAATGCAGATGTTCTTCACCCCTTTTTGTAGATCAAAAGC
AGGATGATAACCATATCCCCCCAGTGCTCATCAGAGTAGGACAATACAAATAAAGCCATCCATC
TCA

hide sequence

RefSeq Acc Id:

XM_008000031 ⟹ XP_007998222

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	7	99,893,445 - 99,968,756 (+)	NCBI
Vero_WHO_p1.0	NW_023666037	79,547,678 - 79,621,203 (+)	NCBI

Sequence:

show sequence

TGGGCTTCGCCGCCCCTCGTTGGCGTGTGGATCCTGGCCTGGCGTTGACCGCCATGCCGGGCCG
CGGGAGCGGTCACCCGGCTCTCGGCCTCACAGTGGAGAGGCCAGGCCAGGCCCGGCCCGGCCCC
ACCGCGGCCATTCCGCACTCTGCGTCGTTCCCCGCCGCTCCTGTCCGGAGTTCCGAGGCGGGGG
GGGGCGTCCGCGGCCTCCCGGCTGGCTGCACCCAGCGTCTGTCCCCAGGGCCCGTTCGGGCGGG
TTAAGTTAGAACGCGGGAAGCGTTCGCGAACGTGACTCGAGAACCTCACCAACCCCGATTTATC
TAAAAGACCACGAATCCCTTGAGAACCTGGGCTCCCTACGCCTCCAGCCTCGGCCACGCGTGGT
GTAGCCCCCCATTAAGAACGGGGAGAGAAAGCGCAAGTGGGCGGGAGGGACTGCGGGGAGCGAA
CGTCTTGATCCCAAAGCGCCCTCCTGGTTTGTCACCATTGAGTGGTTTTCTGTATTGTAATACG
TAGAGCACATTCCAGAACTTCTCAGTTTCGAGTTACCTAACGGATCTTCACTTTGTGCCAATTA
GTCCATTTCTGTGAAAATGCCCCGGTTTCTGCCAAAGGGCAGGAGTCGCTGCTCCTGTGCCGGG
CGCTGCTGGTTGTGTAGGGCGCTGATGCTTTTTTAAGGACCCTCTGCACTGAATAAGGCTTCCT
CGCCTGTCATGATCGGTTAAGTCCTGTCAAAGAAAAAAGGACTGAGTGCAGAAGAAAAGAGAAC
TCGCATGATGGAAATATTTTTTGAAACAAAAGATGTGTTTCAATTAAAAGACTTGGAGAAGATT
GCTCCCAAAGAGAAAGGCATTACTGCTATGTCAGTAAAAGAAGTCCTTCAGAGCTTAGTTGATG
ATGGTATGGTTGACTGTGAGAGGATCGGAACTTCTAATTATTATTGGGCTTTTCCAAGTAAAGC
TCTTCATGCAAGGAAACGTAAATTGGAGGTTCTGGAATCTCAGTTGTCTGAGGGAAGCCAAAAG
CATGCAAGCCTGCAGAAAAGCATTGAAAAAGCTAAAATTGGCCGATGTGAAACGGAAGAGCGAA
CCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGACCAAAGGGAACAGCTAAAGGCAGAAGTAGA
AAAATACAAAGATTGTGATCCACAAGTCGTGGAAGAAATACGCCAAGCAAATAAAGTAGCCAAA
GAAGCTGCTAACAGATGGACTGATAACATATTTGCAATAAAATCTTGGGCCAAAAGAAAATTTG
GGTTTGAAGAAAATAAAATTGATAAAACTTTTGGAATTCCAGAAGACTTGGACTACATAGACTA
AAATATTCCATGGTGGTGAAGGATCTACAAGTTTGTGAATATGTAAATTTTAAACTATTATCTA
A

hide sequence

RefSeq Acc Id:

XM_037992995 ⟹ XP_037848923

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666037	79,547,117 - 79,621,203 (+)	NCBI

RefSeq Acc Id:

XM_037993000 ⟹ XP_037848928

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
Vero_WHO_p1.0	NW_023666037	79,547,667 - 79,621,203 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_007998221	(Get FASTA)	NCBI Sequence Viewer
	XP_007998222	(Get FASTA)	NCBI Sequence Viewer
	XP_037848923	(Get FASTA)	NCBI Sequence Viewer
	XP_037848928	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000014752
	ENSCSAP00000014752.1

RefSeq Acc Id:	XP_007998221 ⟸ XM_008000030
- Peptide Label:	isoform X2
- UniProtKB:	A0A0D9S1L3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_007998222 ⟸ XM_008000031
- Peptide Label:	isoform X4

RefSeq Acc Id:

ENSCSAP00000014752 ⟸ ENSCSAT00000001324

RefSeq Acc Id:	XP_037848923 ⟸ XM_037992995
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_037848928 ⟸ XM_037993000
- Peptide Label:	isoform X3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000003300	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000001324.1	UniProtKB/TrEMBL
InterPro	LZ3wCH	UniProtKB/TrEMBL
	Mnd1	UniProtKB/TrEMBL
	Mnd1_HTH	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
KEGG Report	csab:103236409	UniProtKB/TrEMBL
NCBI Gene	MND1	ENTREZGENE
PANTHER	MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG	UniProtKB/TrEMBL
	MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG	UniProtKB/TrEMBL
Pfam	LZ3wCH	UniProtKB/TrEMBL
	Mnd1	UniProtKB/TrEMBL
PIRSF	Mnd1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
UniProt	A0A0D9S1L3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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