FILIP1L (filamin A interacting protein 1 like) - Rat Genome Database

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Gene: FILIP1L (filamin A interacting protein 1 like) Chlorocebus sabaeus
Analyze
Symbol: FILIP1L
Name: filamin A interacting protein 1 like
RGD ID: 18350390
Description: ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: filamin A-interacting protein 1-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12280,959,751 - 81,044,074 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2280,960,261 - 81,065,200 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604185,513,486 - 85,615,015 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
FILIP1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12280,959,751 - 81,044,074 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2280,960,261 - 81,065,200 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604185,513,486 - 85,615,015 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
FILIP1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38399,828,811 - 100,114,501 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl399,828,811 - 100,114,513 (-)EnsemblGRCh38hg38GRCh38
GRCh37399,547,655 - 99,833,345 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363101,034,678 - 101,316,039 (-)NCBINCBI36Build 36hg18NCBI36
Celera397,942,485 - 98,223,977 (-)NCBICelera
Cytogenetic Map3q12.1NCBI
HuRef396,920,239 - 97,201,792 (-)NCBIHuRef
CHM1_1399,515,018 - 99,796,400 (-)NCBICHM1_1
T2T-CHM13v2.03102,533,856 - 102,819,829 (-)NCBIT2T-CHM13v2.0
Filip1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391657,173,376 - 57,393,167 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1657,173,456 - 57,393,489 (+)EnsemblGRCm39 Ensembl
GRCm381657,353,277 - 57,572,804 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1657,353,093 - 57,573,126 (+)EnsemblGRCm38mm10GRCm38
MGSCv371657,353,390 - 57,572,917 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361657,274,635 - 57,495,076 (+)NCBIMGSCv36mm8
Celera1657,679,629 - 57,898,970 (+)NCBICelera
Cytogenetic Map16C1.1NCBI
cM Map1634.22NCBI
Filip1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81156,403,467 - 56,646,422 (-)NCBIGRCr8
mRatBN7.21142,937,353 - 43,177,085 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1142,940,467 - 43,177,415 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01145,039,488 - 45,275,141 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1145,039,461 - 45,124,423 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01148,252,744 - 48,470,833 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41143,788,676 - 43,859,932 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1142,737,152 - 42,971,618 (-)NCBICelera
Cytogenetic Map11q12NCBI
Filip1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554271,365,112 - 1,471,901 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554271,386,163 - 1,641,985 (-)NCBIChiLan1.0ChiLan1.0
FILIP1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2297,769,602 - 97,876,774 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1397,774,386 - 97,881,597 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0396,941,501 - 97,207,743 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13103,609,631 - 103,890,638 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3103,609,631 - 103,707,488 (-)Ensemblpanpan1.1panPan2
FILIP1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1336,449,932 - 6,745,186 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl336,453,854 - 6,744,896 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha336,606,440 - 6,900,762 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0336,589,197 - 6,883,758 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl336,597,029 - 6,883,475 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1336,474,108 - 6,771,924 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0336,524,843 - 6,819,493 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0336,851,192 - 7,149,431 (-)NCBIUU_Cfam_GSD_1.0
Filip1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602150,265,282 - 150,526,111 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366303,326,294 - 3,406,247 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366303,162,654 - 3,426,337 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FILIP1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13158,890,433 - 159,185,774 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113158,889,362 - 159,187,491 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213168,935,647 - 168,939,003 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Filip1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478913,188,588 - 13,492,823 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 3
Low 33 18 60
Below cutoff 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000004058   ⟹   ENSCSAP00000002320
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2280,960,261 - 81,065,200 (+)Ensembl
RefSeq Acc Id: XM_007986068   ⟹   XP_007984259
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12280,960,686 - 81,044,074 (+)NCBI
Vero_WHO_p1.0NW_02366604185,513,486 - 85,615,015 (-)NCBI
Sequence:
RefSeq Acc Id: XM_007986069   ⟹   XP_007984260
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12281,015,724 - 81,044,074 (+)NCBI
Vero_WHO_p1.0NW_02366604185,531,880 - 85,560,240 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007984259 (Get FASTA)   NCBI Sequence Viewer  
  XP_007984260 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000002320.1
Reference Protein Sequences
RefSeq Acc Id: XP_007984259   ⟸   XM_007986068
- Peptide Label: isoform X2
- UniProtKB: A0A0D9R131 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_007984260   ⟸   XM_007986069
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCSAP00000002320   ⟸   ENSCSAT00000004058


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000006019 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000004058.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.1700 UniProtKB/TrEMBL
InterPro Cortactin-binding_p2_N UniProtKB/TrEMBL
NCBI Gene FILIP1L ENTREZGENE
PANTHER FILAMIN A-INTERACTING PROTEIN 1-LIKE UniProtKB/TrEMBL
  FILAMIN/GPBP-INTERACTING PROTEIN UniProtKB/TrEMBL
Pfam CortBP2 UniProtKB/TrEMBL
UniProt A0A0D9R131 ENTREZGENE, UniProtKB/TrEMBL