AC018714.1 (small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene) - Rat Genome Database

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Gene: AC018714.1 (small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene) Homo sapiens
Analyze
Symbol: AC018714.1
Name: small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene
RGD ID: 16566000
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl8127,292,233 - 127,292,440 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:138
Count of miRNA genes:137
Interacting mature miRNAs:138
Transcripts:ENST00000605028
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 1
Low 64 14 29 18 36 11 34 4 16 19 80 65 11 21 17
Below cutoff 143 61 122 71 74 25 293 62 133 45 152 140 49 103 131

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000605028
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl8127,292,233 - 127,292,440 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC018714.1 COSMIC
Ensembl Genes ENSG00000271509 Ensembl
GTEx ENSG00000271509 GTEx
Human Proteome Map AC018714.1 Human Proteome Map