AC087783.1 (NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa, pseudogene) - Rat Genome Database

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Gene: AC087783.1 (NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa, pseudogene) Homo sapiens
Analyze
Symbol: AC087783.1
Name: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa, pseudogene
RGD ID: 16565938
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1134,709,600 - 34,710,161 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:101
Count of miRNA genes:99
Interacting mature miRNAs:101
Transcripts:ENST00000605070
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2 4 9 12 4 93 6 2 5 17 12 5 1 1
Low 45 44 55 166 33 15 369 18 47 30 373 84 153 40 153 3
Below cutoff 571 386 375 91 145 89 1244 333 625 94 357 382 10 259 745

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000605070
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1134,709,600 - 34,710,161 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC087783.1 COSMIC
Ensembl Genes ENSG00000271369 Ensembl
GTEx ENSG00000271369 GTEx
Human Proteome Map AC087783.1 Human Proteome Map