AC023206.1 (ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2, pseudogene) - Rat Genome Database

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Gene: AC023206.1 (ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2, pseudogene) Homo sapiens
Analyze
Symbol: AC023206.1
Name: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2, pseudogene
RGD ID: 16565915
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1128,144,907 - 28,145,204 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:29
Count of miRNA genes:29
Interacting mature miRNAs:29
Transcripts:ENST00000605824
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 262 210 210 31 314 5 650 124 780 37 325 222 26 64 432 1
Below cutoff 1090 975 576 153 454 66 1697 807 1656 105 564 590 90 475 1063

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000605824
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1128,144,907 - 28,145,204 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC023206.1 COSMIC
Ensembl Genes ENSG00000271332 Ensembl
GTEx ENSG00000271332 GTEx
Human Proteome Map AC023206.1 Human Proteome Map