AL122127.1 (ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 (ATP6V1G1) pseudogene) - Rat Genome Database

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Gene: AL122127.1 (ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 (ATP6V1G1) pseudogene) Homo sapiens
Analyze
Symbol: AL122127.1
Name: ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 (ATP6V1G1) pseudogene
RGD ID: 16565487
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl14105,785,505 - 105,785,831 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:225
Count of miRNA genes:205
Interacting mature miRNAs:209
Transcripts:ENST00000581354, ENST00000603832
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 2
Low 12 10 5 88 1 3 13 11 5 9 1
Below cutoff 257 117 103 73 299 8 110 26 90 10 68 150 65 79 74

Sequence

Nucleotide Sequences

Reference Sequences
RefSeq Acc Id: ENST00000603832
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14105,785,505 - 105,785,831 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL122127.1 COSMIC
Ensembl Genes ENSG00000270371 Ensembl
GTEx ENSG00000270371 GTEx
Human Proteome Map AL122127.1 Human Proteome Map